Aquarana catesbeiana (American bullfrog): 141111353
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Entry
141111353 CDS
T11018
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta isoform X1
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
acat Aquarana catesbeiana (American bullfrog)
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
acat01001
]
141111353 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acat04121
]
141111353 (TRIM28)
Enzymes [BR:
acat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141111353 (TRIM28)
Protein kinases [BR:
acat01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
141111353 (TRIM28)
Ubiquitin system [BR:
acat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
141111353 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_UBOX
zf-RING_2
Bromodomain
zf-C3HC4
PHD_2
YaaC
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
141111353
NCBI-ProteinID:
XP_073459677
LinkDB
All DBs
Position
LG10:complement(244931363..244969815)
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AA seq
783 aa
AA seq
DB search
MSASATREKRSAAASVSAAAAATATTNNGESGGAEADGPESLENCGVCQARLSAEREPQL
LPCLHSVCRDCLSPEPAESSAEPEAAVVNCPVCKNQCLQRDLVENYFLREDSASGQAAET
IHRCTSCEDNAIANSYCVECTEWLCETCVEAHQRVKYTKDHTVKVKGGSQKETEYTVFCP
VHKQEPLMLFCDTCDTLTCRDCQLQGHKDHQYQFFEDAVKNQRKILSALVKRLGEKHTTL
QKSTKDVRNSIRQVIDMQKRLQVDVKMAILQIMKELNKRGKLLVSDMQKVTEGHQDKLEK
QHWNMTKLQKQQEHILRFASWALESSNNTALLLSKKMIYFQLHHSLKVAVDPVEPLGDLR
FQWDSETWTKHAEFFGKIVSDKTGVLPSSHNSNSQVLTPLTNFSPMVQNRSRSGQGRGNF
IQDDFAEGESSGLDSVGQKRGRNSEGGDNEQLKKVPRVSLERLDVDLSPATQPPVFKVFP
GNTTEDYNLIVIERGNAAAAAAAAAAGGDPIVKEEAMETGISIPTGESNEEKPQVRPDGL
PENASAARPASATSDGIASDAPGASTGLSDTGSVARCKVCQKDGTLLTCGQCKNSFHRDC
HLPAVEVASGEWKCMLCQDFPKTVQGDVPADANPSDMSGADQKKCERVLLELFCHEPCRP
FHRLSSGADDAPLIDLTLIRAKLQQKLSPFYTNPDEFVKDVWLMFRNISKLAEDKAVVQS
IIELQSFFEARLSLLFGDRKFTCLASEAGLDEDQQNESSTQRSSPMSTTSESVSSVRNSG
DAE
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcctccgccacccgtgagaagaggagcgcggccgcctcagtctccgccgccgct
gctgcgaccgccactaccaataacggggagagcggcggggccgaggcggacggaccggag
tctctggagaactgcggggtgtgccaggcccgactgagcgccgagcgggagccgcagctg
ctgccctgcctgcactccgtgtgccgcgactgcctgagccccgagcccgccgagagcagc
gccgagcccgaagcagccgtggtcaattgtccagtgtgtaagaatcagtgcttacagagg
gacctagttgaaaactacttccttagagaggattcagcatccggtcaagcagcagagact
attcacaggtgcaccagctgcgaggacaatgccatagctaatagttactgtgtggagtgc
accgaatggctgtgcgagacttgtgtggaagcccatcagcgagtcaagtatactaaggat
catactgtcaaagtcaaaggtggatcccagaaggagacggaatatactgtattctgccca
gtccataagcaggagcctctcatgctgttctgtgatacttgtgatacattgacctgccgt
gactgccaactacagggacacaaggaccaccagtatcaattttttgaggatgctgtcaag
aatcagcgcaaaatcttgtctgctcttgtgaaaagacttggagaaaaacatactaccctt
cagaaatctaccaaggatgttcgtaactcgattcgtcaagtgattgatatgcagaaaagg
ctacaggtagatgtgaaaatggccatcttacaaatcatgaaagagctcaacaagcgtgga
aagctacttgttagcgatatgcagaaagtgacagaaggacatcaggataaactagaaaag
cagcactggaatatgaccaagctacagaagcagcaagaacacattctgagatttgcttcc
tgggctcttgagagcagcaataacactgctttgctgctttccaaaaaaatgatctacttt
cagctgcaccattctctgaaggttgccgtagatccagttgaaccattaggtgatctaaga
ttccagtgggattctgaaacctggacaaaacatgctgagttctttggaaagattgtatca
gacaaaactggtgtcctgccatcgtcgcataattcgaattctcaagtgctgacacctctt
actaacttcagtccaatggtacaaaaccggtccagatctggtcaagggagaggtaacttt
attcaagatgactttgcagagggtgaatcttctgggttagattctgttggtcaaaaaagg
gggcgtaattcagagggaggtgataatgaacagctgaagaaagttcctagagttagcttg
gagcgtttggatgttgatcttagtccagctacgcaacccccagtttttaaagtgtttcct
ggaaacaccacagaggactataatctaattgtaattgagagggggaatgcagctgccgct
gctgcagcggcggcagcaggtggagatcctattgtaaaggaagaggcaatggaaacgggc
atcagcatcccaaccggtgaatccaatgaggaaaaacctcaagtgcgacccgatggcttg
cctgaaaatgcttctgcagctcgcccagcaagtgcaaccagcgatggtattgcttcagat
gctccaggtgctagcactgggttatcagatactggctctgttgctcgctgtaaagtctgc
cagaaagatgggacactgcttacttgtggtcagtgtaaaaacagcttccacagagactgc
catctgcctgctgttgaagtagcaagcggagagtggaagtgtatgctgtgccaggatttt
ccaaagactgttcaaggagacgttccagcagatgctaatccctctgacatgtcaggagct
gatcagaagaagtgtgaacgtgtactgctggaactattttgccatgagccgtgccggcct
tttcacagactctcaagcggagcggatgatgccccattgatcgacttaacacttattcga
gccaagctgcagcaaaagctctctcctttctacaccaaccctgatgaatttgttaaagat
gtctggttgatgttcagaaatatcagcaagcttgcggaggataaagcagtggttcagtcc
atcatcgagctgcagtcatttttcgaagccagactcagcctgctcttcggagatcgcaag
tttacttgcctcgcaagcgaagctggcctggatgaagatcagcaaaacgaaagctcgact
cagcggagttcccccatgagcacaaccagcgagagcgtatcgtctgtaaggaacagcggt
gatgcagaataa
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