Aquarana catesbeiana (American bullfrog): 141112104
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Entry
141112104 CDS
T11018
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
acat Aquarana catesbeiana (American bullfrog)
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acat03009
]
141112104 (IGHMBP2)
03012 Translation factors [BR:
acat03012
]
141112104 (IGHMBP2)
Enzymes [BR:
acat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
141112104 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
141112104 (IGHMBP2)
Ribosome biogenesis [BR:
acat03009
]
Eukaryotic type
Other ribosome biogenesis factors
141112104 (IGHMBP2)
Translation factors [BR:
acat03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
141112104 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
ResIII
nSTAND3
zf-AN1
Helicase_RecD
DEAD
AAA_16
AAA_22
UvrD-helicase
AAA_25
SLFN-g3_helicase
IstB_IS21
Flavi_DEAD
DnaB_C
Zot
AAA
PhoH
ATPase
AAA_31
AAA_33
UvrD_C_2
NTPase_1
ABC_tran
Motif
Other DBs
NCBI-GeneID:
141112104
NCBI-ProteinID:
XP_073460660
LinkDB
All DBs
Position
LG11:complement(77356128..77472339)
Genome browser
AA seq
985 aa
AA seq
DB search
MEEFIKTHLELLKEEREAEIEEARTWQENISLKELQRKGVCLLKLQVANQKTGLYGRLLV
TFTPRKYDAEAVLPSNCFGSGDIVGVYESSSPSEPLATGIVSGVTQKVINIAFDESHSDA
LNLSSDNTYRLLKLANDVTYKRIKKALITLNQYHTGPATRIIDVLFGLSEPSSAGLAGPV
EFLNPSLDDSQKEAVVFSLNQREVAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSN
VAVDNLVERLAAYKERILRLGHPARLLESLQHHSLDAMLARSDNSQIVADIRKDIDLTFA
KIRKLPRKEEKGSFRTEIKALRKELKEREEAAMIETLKAANVILSTTTGASPDGPLKLLP
DNYFDLVVIDECAQALEASCWIALLQARKCILAGDHKQLPPTIISHKAASKGLSLSLMER
LIDKYGDRLVRMLTVQYRMNDSIMQWASQALYGGKLTAHSSVVHHLLKDLPGVTLTEETS
IPLLLIDTAHCGLFEMEVEDEQSKGNPGEVRLVDSHIQALTSAGLKARDIAVISPYNLQV
DLLRQCLLHRYPGLEIKSVDGFQGREKEAVILSFVRSNAKGEVGFLAEERRINVAVTRAR
RHVAVICDSHTVSNSKFLKDLVTYFNEHGEVRTAFEYLDDITPEKYSHENESCKPEATVK
KDSKAKPKKSGNSNFSSHKPNTTTESQAKEKSRTKQDNSVKDFPQSNNLGDQTESSAKQK
LQEEIEDFIADHDKTQLMFPSTLTSHNRLWVHQIAEKYGLQHVSTGEGRNRCITLSKHKV
ISADAVSQKIDDSVAQKPFQSQTSEKEAKEKEIQHKASPNNLDLKHLHMERMQREKAKLE
EKRKKESSVPKAAEKKTSDVKRKGGNKPEPERSDLDSFDALLAETMKADNTCGFGKCKAS
IVTVGDFCIHCNKRFCLSHHVPEVHGCGERAKARARTRISREGVIYAGSGHKDHSLDPTK
KAHLQRKLDKKINEMSSQRKVKKEK
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtttattaaaacccatctagagctcctgaaggaggagagagaggctgaaatc
gaagaggccaggacctggcaggaaaatatctctttaaaggaattacagagaaagggagtc
tgcctgctgaaactgcaggtagcaaaccaaaaaacagggctgtacggacgccttctggtc
accttcacacccaggaagtatgacgctgaggcagtgctgccgagtaactgctttggatca
ggggacattgtgggtgtttatgaatccagcagcccaagtgagcctcttgctactggtatt
gtgtctggtgtcacacaaaaagttatcaatatcgcctttgatgaaagtcatagcgatgct
ttaaatctgagtagcgataatacatacaggcttctgaagctggcaaatgatgttacttat
aaaaggataaaaaaggcattgattacactgaatcagtaccacacaggacctgcaactcgc
ataatagatgtccttttcggattatctgaaccgagcagtgctgggttggcaggaccagtg
gaatttctcaatccgtctttggatgattcacagaaggaggcggttgttttttccttaaac
cagagagaagttgcaattattcacggcccccctggtaccggtaagacgacaacggtggtg
gaaatcatcctacaagctgtgaagcaaggactaaaggtcctttgctgcgctccttccaat
gtagctgtggacaatctagtggagcgtttggctgcttataaagagcgaatattacgtttg
gggcaccctgcacgtctgctggaatccctacagcatcactctctggacgctatgctggca
cgtagtgataactctcagattgttgctgacatccgcaaagatattgacctgacgtttgca
aaaataagaaaactgccacgtaaggaagaaaagggcagcttcagaacagaaatcaaagct
cttaggaaagaactgaaggaacgcgaggaggcagcaatgatcgaaacattgaaagctgcc
aatgttatcctcagcacaacgacaggtgcttccccggacggcccgctgaaactgcttcct
gataattactttgacctggtggtgattgatgagtgcgctcaagcattagaggccagctgc
tggatcgctctactgcaggcgagaaagtgtatcttggccggcgatcacaaacagctacca
cccaccattatatctcacaaggctgcatcaaagggcctgtccctcagcttgatggagcgg
ctaatagacaagtatggggacagattggtgagaatgctgacagtgcaatatcgtatgaat
gactctataatgcagtgggcttcacaagcattgtatggaggcaagctgactgcgcactct
tctgttgtacaccatttgctcaaagatttgcctggggtgacgttaactgaggagaccagt
ataccgttactacttatagacacggcacactgcgggctgtttgagatggaagttgaagat
gagcagtcaaaagggaatccaggtgaggtgcggctggtggactctcacattcaggcactg
actagtgctggtttgaaagctcgggatattgctgtaatatccccctacaacctgcaggtg
gatttgctacgccagtgtctactgcacaggtatcctggtcttgaaattaagtctgtggat
ggttttcaaggaagagagaaggaagctgttatattgtcctttgtaagatccaatgctaaa
ggtgaagtgggctttttggccgaagagcgaagaatcaacgtagcagtaacccgtgctcgt
cgccacgttgctgttatttgtgattcccatacagtcagcaatagcaaatttctcaaagac
cttgtgacttacttcaacgaacacggtgaggtccgaactgcttttgaatatcttgatgac
attacccccgagaaatattcccatgagaatgaaagttgtaaaccagaagccactgttaag
aaagacagcaaagcaaagccaaaaaaatcaggaaattcaaactttagcagtcataagccc
aacactacaactgagtctcaggcaaaggagaagagcagaacaaagcaagataactctgtt
aaagacttccctcaatctaacaacttaggtgaccaaacagaaagttcagccaagcaaaaa
ctacaggaagagattgaggactttatagcagatcacgataaaacccagttaatgttccct
tcaacactcacttcgcataaccgattatgggtccaccagatagcagagaaatatggacta
caacatgtaagcacgggagaaggcagaaacagatgtattacactttccaagcacaaagtc
atttcagctgatgccgtatcacagaaaatagatgattctgttgcacagaaaccttttcag
tcacagacatcagaaaaagaagcaaaagaaaaagaaatccaacataaagcttctcccaac
aaccttgatttgaagcacttacatatggaacgcatgcagagggagaaagctaaacttgaa
gaaaaaagaaagaaggaatcttcagtgccaaaagctgctgagaagaagacatccgatgtg
aaacgtaaaggtggaaataaacccgagccagagaggtcagacctggacagctttgatgct
ctgctagctgagacaatgaaagcagacaatacttgtggcttcggaaaatgtaaagccagt
atagtaacagtaggggatttctgcatacactgcaataaacgcttctgcctcagtcaccat
gttccagaggtacatggttgtggtgaaagagccaaagcacgagcccgaacaagaatcagt
cgagaaggagtgatctacgcaggaagcgggcacaaagaccactccctagacccaacaaag
aaagctcacttgcagagaaaactagataaaaaaattaatgaaatgtcaagtcagagaaaa
gttaaaaaggaaaaataa
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