Aquarana catesbeiana (American bullfrog): 141112233
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Entry
141112233 CDS
T11018
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
acat Aquarana catesbeiana (American bullfrog)
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acat03041
]
141112233
Spliceosome [BR:
acat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
141112233
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_19
TPR_12
TPR_15
TPR_10
HAT
FHIPEP
NRDE-2
Motif
Other DBs
NCBI-GeneID:
141112233
NCBI-ProteinID:
XP_073460959
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All DBs
Position
LG11:108737602..108809194
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AA seq
739 aa
AA seq
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MADPRRRRRFSPAVNPPMSDFSTMDCDVLTTEDCSGSDEESCGVESGMPPEFNTFWKAAM
RKPFNFHAWTKLVAYAESEKNLPACRKAYDAFLAYFPLCHIYWKKYADLEEHHGNEEETE
KIFERAVKANPLNVNMWTNYIQFLKKTMDMDLTKSVDKLRGVFREAAKASGMEFHSDVLW
RMYIEFEIQQKNLKEVTVLFDRVLTIPTQLYKTHYERFRAFIFSYSPIEILNTEELDWIH
SRVQIESDNDQIAAEDSDDCLESLTESDIAKFREHILKIREQLYILNEAEVKKRWTFEES
IKRLYFYAIPVNVKQLQNWRKYLEFEVSQGQHERIVLLYERCLMSCALYEDFWLSYAQYM
EGHSVEGARSVFERACRIHLPIKYGIHLQWAAFEEKHGCLDSARDILCNFERRTPGLAIV
RLRRVGLEQRNGNLQEAERLLKEAVQISAGTKLEGFYAVKLSRLILKLQRDPHKAKAVLG
EAIKKDPENPHLHMCMLEIKMSTDDAEDAPLVCLEEALKCKLSDDSKKILSQKRLEFLED
FGSNLASWMDAYNEHQTYLKTKGDDGNKDIVKDSVSEDCYPPGVLPPPESLKPEVPPEYK
STKNAPEPAKSKANVSVPENCATVSSYSKANATTPTVERYSSSNYYSPRPYFAPKRTYGP
PQNAPMQPFFNQFTAPRENLFNDFHQAIIPPPPQGPFSGPPGPFMDNFRMPFNMPPIFGY
GPWFQNFGAQAWNRFFPPQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccgaggagacgtagaaggttttcaccagcagtgaatccccctatgtctgat
ttctccaccatggactgcgatgttctgaccacggaggactgtagtggcagtgatgaggaa
tcctgtggtgtggaaagtggtatgcctcctgaattcaacactttctggaaagcagctatg
cggaagccattcaatttccatgcttggactaaactggtagcatatgcagaaagtgagaaa
aacctgccagcatgcagaaaagcttatgatgcgttcctcgcatattttcctctttgtcac
atctactggaagaagtatgctgacctggaggagcatcatggtaatgaagaagagacagaa
aagatctttgagcgtgctgtgaaggccaacccacttaatgtcaacatgtggaccaactac
attcagtttctgaagaagactatggacatggatttgacaaaatctgttgacaagttacga
ggtgtgtttagggaggctgcaaaagcttctggtatggagtttcattcagatgtgctatgg
aggatgtacatagagtttgagattcagcagaagaacctaaaagaagttactgtactattc
gatcgagtgcttactattcccactcagctatataaaacacactatgagagatttagggcg
tttatattctcttattccccgattgaaatcttgaacacagaggaactggattggatccac
tcaagagtacagattgaaagtgacaatgatcagatcgctgctgaagattcagatgactgt
ttggagtcattaacagaatctgatatagcaaagtttcgggaacatatactcaaaattaga
gagcagttgtacatcttaaatgaagcagaagttaaaaagcgctggacctttgaagagtcg
atcaaacggctttatttctatgctataccagtgaatgttaagcagctgcaaaactggaga
aaatatctggagtttgaggtgtctcagggtcagcatgagcgtatagtattactgtatgag
cgctgcctgatgagttgtgcactttatgaggatttctggctgtcgtatgcacaatatatg
gagggccattcagtggagggtgcccgttctgtatttgagagagcctgtcgtatccattta
ccaataaaatatggcatacatcttcaatgggctgcatttgaggagaagcatggatgtttg
gactctgcccgtgacattttgtgtaactttgaacgtagaacacctggtttagctattgta
cgtctgaggcgtgttggtctggaacagcgaaatggaaatctacaggaggctgaacgattg
ctaaaggaggctgtgcagatcagtgcaggcacaaagttagaaggattttatgctgtgaaa
ctctcacgactaattctaaagctccagagagacccacacaaggcaaaggctgtacttggt
gaagccattaagaaggatccggaaaatccccatttacatatgtgtatgctggagattaag
atgtccacagatgatgctgaagatgctcctctggtctgtttggaagaagctttgaaatgt
aaactctctgatgattcgaagaagatcctatctcaaaaacgacttgaatttctagaagac
tttggcagtaacctagcaagctggatggatgcctacaatgaacatcaaacatatctgaag
acaaaaggagatgatggaaacaaagatatagtcaaagactcagtttctgaagactgctac
ccaccaggagttctgccaccacctgaaagtttaaaaccagaagttcctcctgagtataag
tctacaaaaaatgcaccagaacctgcaaagagcaaagcaaatgtttccgtgccagaaaac
tgtgcaactgtatcatcttattcaaaagcaaatgctacgacacccactgtagaacgttat
tcaagtagtaattactatagcccgcgaccatattttgcacctaaaagaacatatggccca
cctcaaaatgcaccaatgcagcctttcttcaatcaatttacagcaccaagagagaacctg
tttaatgacttccatcaagccataatccctcctccccctcaaggcccctttagtggaccc
cctggaccatttatggacaatttcaggatgccgtttaacatgccccctatatttggctat
ggaccatggtttcagaactttggagctcaagcttggaacagattctttccaccccagtga
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