Aquarana catesbeiana (American bullfrog): 141112618
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Entry
141112618 CDS
T11018
Symbol
UTP4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
141112618 (UTP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acat03009
]
141112618 (UTP4)
Ribosome biogenesis [BR:
acat03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
141112618 (UTP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
ANAPC4_WD40
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR5
WD40
WDR55
Beta-prop_NUP159_NUP214
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_IFT140_1st
RMC1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_Aladin
DUF7165
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_Vps41
PEP5_VPS11_N
Beta-prop_ACSF4
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_BBS7
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_NWD2_C
Lactonase
Beta-prop_LRRK2
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
141112618
NCBI-ProteinID:
XP_073461679
LinkDB
All DBs
Position
LG11:251930754..251962248
Genome browser
AA seq
686 aa
AA seq
DB search
MGEFTVHRVRFFDYVPSGVRCISYSEQTGRLAVARNDGSVEVYNFPANYYQEKVIPGDEK
RSTESICWVSGDRLFSVGLNGEIIEYDLERLCVKYSVNGFGGPLWSIVPSPCGSQLAVGC
DDGSVKLFTITPEHIVFEKSLDRQKERILCLAWHPSGSHIVAGSINMIKVFSVSSGRLLQ
VLKMDRRGLVGRKRECIVWGVSVLSCGEIVSVDSSGKLQFWNLEMGTLIRSYTAATSDIL
CIAVSQKEDSLVVGTAQGSVLQFQHLALQAGKDEKQWVATKPFQHHSRDVRAVAHSSTSL
ISGGLDGNIVARPLLERIKVKSYEAALRKITFPHRHLVSCAQASRLLLFQFPDHLELWRL
GQTDQSGKDGDILPVKHEQELLLQLKRKGSESIRCSCISRCGSWLSYTTASRLFLHRLHY
DNNNFSISKVPKFAQPPSAALHLKFSPDSKRLYVGAERGCVHIMDLSKGTCQHSHTLQPP
SASSHPVHLLAASSDGSLLAVASSNSQVDIYDVKDQKYMCSVPQYNSPTTAISIHPSTNN
LVIAYADQQVLEFSISQNKYTDWGRNVLQHGLHRDWLERDTPIMGIAFNPSRSKDILMHD
NYMFCVIDKSLPLPDDKTVLVNQRTLKQLSVNARMSHAHAFKITRKYQPLLFMDLLDNGE
LVLVERTLSDIQAQLPPPMKQKKFGT
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggggagtttacggttcaccgcgtgcggttcttcgactatgttccatccggtgtgcga
tgcatttcatactctgaacagacaggtcggctcgctgtggctcgcaatgacgggtctgtg
gaagtgtacaactttcctgccaactactaccaggaaaaggtcattcctggtgatgagaag
agatccacagagtctatatgttgggtgtccggcgatcgactcttctctgtgggtctgaat
ggagagatcatcgaatacgatctggagagactgtgcgtcaaatattctgtgaatggattt
ggaggccccttatggagcatcgtaccaagtccttgtggatctcagcttgccgtgggatgt
gatgacggctccgtgaagctgttcaccattacaccagaacacattgtgtttgagaagagc
ttggatcgacagaaagagcgtattctgtgcctcgcttggcatccttcaggttcccatatt
gttgctggttccatcaacatgattaaagtgttcagcgtctcatcaggtcgcctgctgcaa
gttctaaagatggaccgccgtgggctggtcggccggaaacgagaatgtatagtctggggt
gtgtctgttctgtcctgcggagaaattgtcagcgtggattcttctgggaagctccagttc
tggaatttagagatggggacacttatccgctcatacactgccgccaccagtgatatcctg
tgcatagcggtgtctcagaaagaagacagtctggtggtgggcactgcacagggatccgtt
ttacagttccagcacttggcactgcaggctgggaaggatgagaagcagtgggttgccacc
aaaccattccagcatcacagccgtgacgtccgggcggtggctcacagcagcacgtctctg
atttctggaggcttggatggcaatattgtcgcacgaccgttgttggagaggataaaagtg
aaatcctatgaggctgcactgagaaaaatcaccttcccacatcgccatcttgtgtcttgc
gctcaggcttcccgcttgctgctcttccagttccccgatcatctggagttgtggcgtctg
ggtcagactgatcaatcaggtaaagacggtgatatccttcctgtgaaacatgaacaggag
ctccttctacaactgaagcgaaagggatctgagagtatacgatgtagctgtatctcccgc
tgtgggtcatggctgtcctacaccaccgcctctcgcctcttcctccatcggctgcactac
gacaataataatttcagtatcagtaaggttccaaagttcgcccaaccaccaagcgcagct
ctgcatcttaaattttctcctgactccaaacggctgtatgtgggagcagaaagaggatgc
gttcatattatggacctgtccaaaggcacctgccagcacagtcacactctacaaccacca
tcagcttcttcacatcctgttcaccttctggctgccagctcagatgggtccctactagcg
gtagcatcttctaattctcaggttgacatctatgatgtgaaagaccaaaagtatatgtgc
tctgttccccagtacaactctcccacaactgcaataagtatccacccatccaccaataac
ctagtgattgcctatgccgaccagcaggtgcttgagttcagtatttctcaaaataagtac
acagactggggcaggaatgtcctccaacatggtcttcatcgcgactggctggaacgggac
acacctatcatgggaatcgcatttaacccctcaagatcaaaggacatccttatgcatgat
aattatatgttttgcgtcattgacaagtctctacctcttccagatgacaagaccgttctg
gtcaaccagaggacgctgaagcagctctcggtgaatgcgcggatgagccatgcacatgct
tttaaaataaccagaaaatatcagccattgctgtttatggacttgttggataacggcgag
ttggttctggtggagagaacgctcagtgacattcaggcacagctgccacctcccatgaaa
cagaagaaatttggaacataa
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