Aquarana catesbeiana (American bullfrog): 141112663
Help
Entry
141112663 CDS
T11018
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141112663 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acat03021
]
141112663 (SF3B3)
03041 Spliceosome [BR:
acat03041
]
141112663 (SF3B3)
03036 Chromosome and associated proteins [BR:
acat03036
]
141112663 (SF3B3)
Transcription machinery [BR:
acat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
141112663 (SF3B3)
Spliceosome [BR:
acat03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
141112663 (SF3B3)
Complex B
141112663 (SF3B3)
Complex C
U2 SnRNP specific factors
141112663 (SF3B3)
Chromosome and associated proteins [BR:
acat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
141112663 (SF3B3)
TFTC complex
141112663 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
141112663
NCBI-ProteinID:
XP_073461757
LinkDB
All DBs
Position
LG11:complement(253715802..253749425)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGISFAIHGNFSGTKLQEIVVSRGKIVELLRPDANTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIIILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVASAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQDSLSPIMTCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKIIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPQGEQ
RSRFLAVGLIDNTVRIISLDPSDCLQPLSMQALPAQPEALCIVEMGGAERQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESSNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVLNPIQGNTLDLVQLEQNEAAFSVTVCRFSNSG
DDWYVLVGVAKDLILNPRSVAGGLVYTYKLINNGEKLEFVHKTPVEEVPAAIAPYQGRVL
IGVGKLLRIYDLGKKKLLRKCENKHVPNFIVGIQTIGHRVIVSDVQESLFWVRYKRNENQ
LIIFADDTHPRWVTTSSLLDYETVAGADKFGNICVVRLPTNTNDDVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPICGRDHLSYRSYYFPVKNVIDGDLCEQFNSMEPIKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtacaatattacgctgcagagggccaccggcatcagcttcgccatccatggg
aatttctcaggaaccaaactacaagagattgtggtttcccgggggaagattgtggagtta
ctccgacccgatgccaacacaggaaaagtccacaccttgctgacggtggaagtgttcggg
gtgattcgctctctcatggccttccgcctgaccggaggcacgaaggattacattgtggtg
ggcagtgactcgggtcgtatcatcattctggagtatcacccctccaagaacatgttcgag
aagatccaccaagaaaccttcgggaagagcggctgtcgtaggatcgtccccgggcagttc
ctggctgtggaccccaagggccgagctgtcatgatcagtgccattgagaagcagaaactg
gtctacatcctgaacagagacgcagctgcccgtctgaccatctcctccccactcgaggct
cataaggcgaacactctggtgtaccatgtggtgggagtagatgtgggctttgaaaatccc
atgtttgcctgtctggagatggactatgaggaagcggataatgacccaactggagaggca
gctgctaacactcagcagacgctaaccttctatgagctggatctgggcctgaaccacgta
gtgcgcaaatacagtgagcctttggaggagcatggcaacttcttgatcacagttcctgga
ggctcagatggtcccagtggagtgctcatctgctctgaaaactacattacctacaagaac
tttggagaccagccagatattcgctgtcccatcccaagaaggcggaatgatcttgacgat
ccagagcggggaatgatctttgtctgctcggctacacacaaaaccaaatccatgtttttc
ttcctggctcagacagaacagggggacatctttaaaatcacacttgagactgatgaagac
atggtcacagaaatccgtctgaaatactttgataccgttccagtggcttcggcaatgtgt
gtcttgaagaccggttttctctttgtagcttcagaatttgggaaccattatctctaccag
attgcccatctgggtgacgatgacgaggaaccggagttctcctcagcgatgcctttagaa
gagggagacacctttttcttccagccccgcccactgaagaacctggtgctggtagatgag
caggacagtctctcccccatcatgacatgccagattgctgacttggccaacgaagacact
ccccagctgtacgtggcctgtggccgaggtccccgctcctctctcagggtcttgagacac
ggtcttgaggtgtctgaaatggccgtctctgagctgcccggtaaccccaatgctgtgtgg
acagttagacgacacattgaagatgagtacgatgcatacatcatagtatccttcgtgaac
gccaccctggtactctctattggtgagactgtagaggaagtgacagactctggatttctt
gggacaaccccaactctgtcttgctctctgctaggagaagatgccctagtgcaggtgtat
cctgatggaatccgtcacattcgtgcagacaagagagtcaatgagtggaagactccgggg
aaaaagatcattgtgaagtgtgcggtcaaccagcgtcaggtggtgattgctctgactgga
ggggaactcgtctactttgagatggacccttcagggcagctaaatgagtacacagagagg
aaggaaatgtctgccgacgtagtgtgtatgagtctggccaatgtaccacaaggggagcag
cgatcacgcttcttggctgttggtcttatagataacacagtcaggataatttctctggac
ccttcggactgtctacagcctctcagtatgcaggccctccctgctcagcccgaggccctc
tgtatagtggagatgggaggggcagaaagacaagatgagctgggagaacgaggctccatt
ggctttctctaccttaacataggacttcagaacggagtactgctaagaaccgtgttagac
ccggtaacaggagacttgtctgataccagaacccggtacttgggttcacggcctgtcaaa
cttttccgagtccggatgcaaggtcaggaggcggtgcttgctatgtccagtcgctcctgg
ctcagctattcttaccagtcccgctttcacctgacaccgctgtcctacgagactctggaa
tatgcgtctggctttgcgtctgaacaatgtccggagggtattgtagcaatctcaactaac
acactaagaattttggcgttggagaagttgggtgcagtgtttaatcaggtggccttccct
cttcagtacaccccacgcaagtttgtcatccaccccgaaagtagcaatttgatcattata
gaaactgatcacaatgcttacacggaagccaccaaggctcagcgcaagcagcagatggca
gaggaaatggtcgaagctgcaggagaggatgaacgagaactggcagcagaaatggcggca
gcattccttaacgagaacttgcccgaatcgatctttggagctcccaaagcaggcaatggg
cagtgggcgtcggtcatcagggttttgaatcccatccagggaaacacactggacctggta
cagctggagcagaatgaggcggcattcagcgtgactgtgtgtcggttcagtaactccggg
gatgattggtatgtcttggtaggcgtggcgaaagatcttatactgaacccgcgttcggtt
gctggaggattggtgtatacctacaagttgataaataatggggagaaactggaattcgta
cacaagaccccagtagaggaagttccagctgctattgcaccctaccaggggcgagtcctg
ataggggtgggcaaattgctgaggatctatgacctgggaaagaagaagcttctgaggaag
tgcgaaaacaagcatgttccaaacttcattgtggggatccaaactattggacacagggtg
atcgtgtcagatgtccaagagagcttgttctgggtgcggtataagcgaaatgagaaccaa
ctgatcatatttgctgatgacacacacccccgctgggtgaccacctcttctctgctggac
tacgaaacggttgctggggcagacaagtttgggaatatctgcgtggttcgtctacctacc
aacacaaatgacgatgtggatgaagatcctactggtaacaaggcactgtgggacagggga
cttcttaatggagcttctcagaaggccgaggtgatcatgaactatcatgtaggagagact
gtgctatcgctgcaaaagaccaccctgattcctggaggatccgagtccctggtctacact
actctgtcaggaggaattggaatccttgtcccgtttacatctcatgaggatcatgacttc
ttccagcatgtagagatgcacctgcgttcggagcaccccccaatctgtggccgtgatcac
ctcagctatcgctcttattacttccctgtcaagaatgtgattgatggagatctgtgtgaa
cagttcaactccatggagccgattaaacagaagagtgtagcagaagaactggacaggacg
cctcctgaagtctccaagaaacttgaagatattcgaacccgttacgctttttaa
DBGET
integrated database retrieval system
