Aquarana catesbeiana (American bullfrog): 141113355
Help
Entry
141113355 CDS
T11018
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-4-like
KO
K06525
integrin beta 4
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04382
Cornified envelope formation
acat04510
Focal adhesion
acat04512
ECM-receptor interaction
acat04518
Integrin signaling
acat04810
Regulation of actin cytoskeleton
acat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141113355
04518 Integrin signaling
141113355
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141113355
09142 Cell motility
04820 Cytoskeleton in muscle cells
141113355
04810 Regulation of actin cytoskeleton
141113355
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141113355
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acat04147
]
141113355
04515 Cell adhesion molecules [BR:
acat04515
]
141113355
04090 CD molecules [BR:
acat04090
]
141113355
Exosome [BR:
acat04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
141113355
Exosomal proteins of bladder cancer cells
141113355
Cell adhesion molecules [BR:
acat04515
]
Integrins
Integrin beta subunits
141113355
CD molecules [BR:
acat04090
]
Proteins
141113355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
I-EGF_1
EGF_Teneurin
Pur_ac_phosph_N
EGF_integrin
FN3_DSCAM-DSCAML_C
EGF_2
CRLF2-like_D2
SEA
Motif
Other DBs
NCBI-GeneID:
141113355
NCBI-ProteinID:
XP_073462516
LinkDB
All DBs
Position
LG12:complement(87100812..87207815)
Genome browser
AA seq
1396 aa
AA seq
DB search
MAMLAIFPPFLSQRSLSRKEKIFPNGLKQPWPDSTPPFSFKNVIHLTDDRLDFRNKLKNE
RISGNLDAPEGGFDAILQTAVCTNIGWRDGSTHILVFFTESAFHYEADGMNVLDGILPRN
DERCHLDRTGLYTNDILQDYPSVPTLVRLLAKHNIIPIFAVTNHSYSYYEELSKYFTMAE
IGELQEDSSNIVQLLDTAFVRIRSRMHIRDHNTPRALNIFVSSESSTLTEAGSFQVTRGE
VGTFKVNVKALEKVGGQDVCNLPKQDQAGNVILRPSTFTNGLEIDASVICDVCPCEQQKE
MNSPKCNGNGHFVCGHCECKVNWEAAVPERSEYCSTGDCKGLISSQRYCQFNTATCPRVS
GFMCNDRGHCYMGACACQTGWEGPACDCPISNQTCLDRNGGLCNNRGKCECGRCKCDAES
QFADVMCEFSSSLRLLGACEDVRTCAQCQAWGTGEKKGKKCESCDIQIKMVDELTKVDER
TEKCTFCDEEDDCTYHYTVEAVGSVLANYTVLVQKKKECPPGAFLWLIPLLIFLMLLLGL
LLLLCWKYCACCRACLALLPCCGRGRTVGFKEDHYMLRQSLMQSDYLNTPLVRNRNLKGG
DSVRWKITNNVHQPPPSPELVPYGVSLRLARLFTENLSKLQTRECEQLRREVEQTLNEVY
KVIPGTHKVKQTNFRLQSNAGKRQDHTIADTVLMAPREAEPEIVKVTEKHVTQESFQDLK
VTPGYYTVISVRDAYGLVEFQEGVELVDVCVPLFIRPEDDDEKQLLVEALEVPTGIAHLG
KKNVNLTIIKKQAKSIVSFVKPAYTYSRHDQLARVPVSREILQSGKSQVTYRSKDLTARE
GKDYAFSEGDLTYQGDDTLSEITVPLLDRSEVDTLLGNRQVKQFLLELSNPKYGAKVGKC
PQCTITINDSPVPSEPGRLAFNVISSTVTQLSWAEPAETNGNITAYEVNYGMVNEDNLPI
IPDIPIIDAKGGEDYDSYLLYSADVLRSPVGSKRPSVSDESEQFLNGRMDFSFPGSVSSL
TRTGTLGYQQLNPSVHQETYRFGSTSSQHTTVLSGHGASGQSRLGLPPLMTGSGRGRTHS
EDVWDALSSLDVAIQESRISPGIPDTPTRLVFSALGPTSLKVSWQKPLCEREVLGYKVHY
QLLSGSDSRTIDILNPRENSVVVEDLLPNHSYMFRVKAQSEEGWGPEREGVITIESQVDP
HSPLSPVPGSPFTLSTPSXPLVFTALAPDSLQLSWVRPRKPNGTILGYMVTCEMLHRGEE
PRNIYVEGDMPETMLTVPFLNKNLPYKFKVQAKTMQSFGPEREGXITIESQDGGNFSQFG
TQQITRREVFNLPXSQTNVTHSTMSEPFFKDGMSVATHCMESSGTVTQQVTKEYVTRTMM
QGGSLSRQVERQFYEA
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgctggctattttccctcccttcctgtctcaaagatcattatcaagaaaagag
aaaatcttccccaatgggctgaagcagccttggccagacagcactcctcccttctccttc
aagaatgtaatccatctcaccgacgaccgtttagatttccgcaataagcttaagaacgag
aggatatctggaaatttggatgctccagaggggggttttgatgccatcttacaaactgca
gtgtgcacaaatattggttggagagatggcagcacccatattttggtctttttcacggag
tcggcatttcactatgaagctgatggaatgaacgttcttgatgggatcctgcctagaaat
gatgaacgctgtcacctggatagaacaggcctttacacgaatgacattcttcaggattat
ccatccgttcccactcttgtgcgacttcttgcaaaacataacatcatcccaatcttcgct
gttaccaaccattcctacagctactatgaggaattaagtaagtacttcacaatggccgag
attggagaattacaggaagattcttccaacatagtacaactcctggacacagctttcgtg
cgaatccgatcccgaatgcacatcagggatcataacactccacgtgccttaaatatattc
gtctcatcagaatcatccacattaacagaagctgggtccttccaggtgactcgtggtgaa
gtggggacattcaaggttaatgtgaaggctctagagaaggttggtgggcaggacgtttgt
aatcttccaaaacaggaccaggcaggcaatgtcatcctcagaccgtccacgtttaccaat
ggcctggagattgatgcttccgtcatatgtgatgtctgcccgtgtgaacagcaaaaagaa
atgaattctcccaagtgcaatgggaatgggcactttgtatgcgggcattgtgagtgcaag
gttaactgggaagcagcagtgccagaaaggtctgagtactgctccacaggagattgcaag
ggactgatatcaagtcaaagatactgccagttcaatacagccacgtgtccacgtgtaagc
ggctttatgtgcaatgatagaggacattgctatatgggagcctgcgcatgtcagactgga
tgggaaggacccgcatgtgattgcccaatcagtaatcagacttgcctggacaggaatggg
ggcctgtgcaataaccgagggaaatgtgagtgcggtcgttgcaaatgtgatgccgagtcc
cagtttgccgatgtcatgtgtgaatttagcagctcattgcgcctcctgggggcctgtgag
gatgttcgcacatgtgcgcagtgccaggcctggggcactggggagaagaagggaaaaaaa
tgtgaaagctgcgacatccagataaagatggtagatgagctcaccaaagttgatgaacga
acagagaaatgcactttctgtgatgaggaggacgattgtacctatcattacacagtagaa
gcagtgggttctgtgttagccaattacactgtgctagtacaaaagaaaaaagaatgtccc
cccggtgccttcctatggctcatccctctactcatcttcctgatgctgctcctcggtctg
ttacttctattgtgctggaaatactgtgcctgctgcagggcttgtctggctctgctgcct
tgctgtggacgagggcgcactgtgggatttaaggaagaccactatatgctacgacaaagc
cttatgcaatctgattatctgaacactccacttgtacggaatagaaacctgaaaggtgga
gactctgtgagatggaagattaccaacaatgtacaccaaccacctccatcacccgagctg
gtcccatatggagtctccttgaggttggctcgccttttcactgagaacctgtctaagctt
cagacaagggaatgtgagcagctccgtcgggaagttgaacaaacgctaaatgaggtgtat
aaagtgatacctggaacacacaaggtgaagcagaccaatttccggttacaatccaatgca
ggcaaaagacaagatcacacaattgcagacaccgtattgatggctccaagagaagctgaa
cctgaaattgtaaaagtcaccgagaaacatgtcacccaagagtctttccaagacttgaaa
gtcacccctggctactacacagtcatatctgtcagagatgcttatgggctggtggaattt
caagagggagtggaactcgtggatgtttgtgttccccttttcatcagaccagaagatgac
gatgagaagcagttattggtggaggcactggaggttcccacaggaatcgcccacctggga
aagaaaaatgttaaccttacaatcattaagaagcaagctaagagtatagtgtcctttgtg
aagccagcgtatacctacagccgccatgatcaattagcacgtgttcctgtttctcgggaa
attctgcagagtggcaaatcacaggttacctaccgctcaaaggacctgacggctcgtgag
ggcaaggattatgcattctcagaaggtgacctgacataccaaggagatgacacactctct
gagatcacagttccattgcttgaccggtcagaggtggacactttgttgggaaaccgccag
gtcaaacagttcctgctggagcttagtaatccaaagtatggggccaaggttggcaaatgc
ccacagtgcaccatcaccattaatgacagcccagttccaagtgaaccaggccggctggct
tttaatgtcatttccagcaccgtgactcagttgagctgggcagagcctgcagagaccaat
ggcaatatcacagcatatgaagttaactatggcatggtcaatgaggataaccttcctatt
attccggatattccaattattgacgcaaagggtggagaggattatgacagctatctcctg
tacagtgcagatgtgctgcgatctccagtgggaagcaagagacccagtgtgtctgatgaa
tcagaacaattccttaatgggcgcatggacttttctttccccggatccgtaagcagcctg
actcgtacaggaactcttggctaccaacaacttaatcctagcgtgcaccaagaaacatac
aggtttggcagtaccagttctcagcacacaactgtcctttcaggacatggggcatcagga
caaagccgactgggactacctccacttatgacggggagtggaagagggcgcacccattca
gaggatgtgtgggatgctcttagcagtttggatgtggccatacaggaatcccgcatttct
cctggaatcccagacacgcccactcgcttggtgttctctgcgttggggccgacatcctta
aaggttagctggcagaaaccactgtgtgaacgagaagtgctggggtacaaggtgcactat
cagctgctcagtggaagcgattctcggaccatcgatattctgaatcccagagagaactca
gtggtggtggaagatttgctccccaaccattcctatatgttccgggtgaaggcacaaagt
gaggaaggctggggaccggaacgggaaggtgtcatcactatagagtcccaggtggacccg
cacagtcctctcagccctgtaccaggatcccccttcaccctgagcactcccagtngcccc
ctcgtctttacagctcttgccccagattcactgcagctgagctgggtgagaccaaggaaa
cctaatggcaccatcctgggttacatggtcacctgtgaaatgctgcacagaggagaagaa
ccaagaaatatatacgtggaaggtgatatgcctgagactatgctgaccgttcccttcctg
aataaaaatctgccctacaagttcaaagtgcaagccaaaacaatgcaaagctttgggcca
gagagagaagganccatcaccatagaatctcaggatggaggaaacttctctcagtttggt
acacagcagatcacacggcgagaggttttcaatctcccanacagtcaaaccaatgtcact
cactccacaatgtcagagcctttcttcaaagatggcatgtctgttgccacccactgcatg
gaaagctcgggcacggtcacacaacaggtcaccaaagagtacgtcacacgaacaatgatg
caaggaggatccctcagtagacaggtggagcgccagttctatgaagcctaa
DBGET
integrated database retrieval system
