Aquarana catesbeiana (American bullfrog): 141113468
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Entry
141113468 CDS
T11018
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
acat Aquarana catesbeiana (American bullfrog)
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acat03041
]
141113468 (RBM39)
Spliceosome [BR:
acat03041
]
Common components
Common spliceosomal components
General mRNP proteins
141113468 (RBM39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_occluded
DUF8400
RBD_DEAH11
PRP38_assoc
RRM_7
RSRP
Presenilin
Motif
Other DBs
NCBI-GeneID:
141113468
NCBI-ProteinID:
XP_073462672
LinkDB
All DBs
AA seq
557 aa
AA seq
DB search
MADDIDIEAMLEAPYRKDENKQNSANGHEERSKKKKKSKSRSRSRERKRSRSKTRKHSKE
REKKRSRSKEKKRSRSKERKRSRSKSRDRKFRGRYRSPYSGPKFGGPMRGKMGVPHGVKL
RRRSKSRSPQKREKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRD
VRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANN
LQKGTAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDS
ECAKKALEQLNGFELAGRPMKVGHVTERTDASNASSFLDSDELERTGIDLGTTGRLQLMA
RLAEGTGLQIPPAAQQALQMSGSLAFGAVQDLQTRITQQSEVPKPSPDRTEPWGQAAHAP
FALAAASAAAITMSSATLPIPPTATQPLATQCFQLSNMFNPQTEDEPGWDTEIKDDVIEE
CNKHGGVVHIYVDKSSPQGNVYVKCPTIASAIAAVNALHGRWFAGKMITAAYVPLPTYHS
LFPDSMTSTQLLFPVRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatatcgatatagaagcgatgctggaagctccttacaggaaggacgagaac
aaacagaacagtgccaatggacatgaggagcgtagcaagaagaaaaagaagagcaaaagt
aggagccgcagtcgcgagcggaaacgtagccgtagcaagactcgtaagcatagtaaggaa
cgggagaaaaaaagaagcagaagcaaagagaagaaacgtagccgcagtaaggaacgaaaa
aggagccgttcgaaaagtagagatcgtaaattcagaggtcgatacagaagcccatactct
ggaccgaaatttggaggtcccatgcgtggaaagatgggagtaccacatggtgtgaagcta
aggcgcaggtcaaagagcagaagtcctcaaaaaagagagaaaagccctgtaagagaacca
atagataatcttacaccggaagagagggatgcacgtactgtcttttgcatgcagctagca
gccagaatccggccaagagatcttgaagagtttttctccactgtaggaaaggtccgtgat
gtacgaatgatttcagatagaaattccaggcgctctaagggcattgcttatgtggagttt
gttgatgtcagttctgtacctctagccattggcttaacaggacagagagtcttgggtgtt
cctattatagttcaagcttctcaggccgaaaagaacagagctgccgctatggccaataat
ttacagaaaggcactgcaggaccaatgaggctgtatgttgggtctttgcactttaacata
acagaagacatgctacgtggaatatttgaaccatttggtagaatcgaaagcatccaactt
atgatggacagtgagactggtcgctccaagggatatggatttattactttctcagattcc
gaatgtgccaaaaaagctctagagcagttaaacggctttgagcttgctgggcgccctatg
aaggtcggtcatgtgacagagcgtactgatgcttcgaatgccagttcatttttggatagt
gatgagcttgagagaactggaatagaccttggcaccactggtagacttcagcttatggca
aggctggctgaaggtaccggtctacagattcccccagctgctcagcaagctttacagatg
agtgggtcattggcttttggagctgtgcaagatctccagacaagaattacacaacaaagt
gaagtccccaaaccatctcctgatagaacagaaccttgggggcaagctgcacatgctccg
tttgctcttgctgctgcttctgctgctgccatcacaatgtcttcagccacattacctatt
ccaccaacagcaactcagccactcgctactcagtgcttccagttgtcgaatatgtttaac
cctcagacggaagatgagccaggctgggacacagagataaaagacgatgttattgaagaa
tgcaacaaacatggaggagttgtacacatttatgtagataagagttcaccacagggaaat
gtttatgtgaaatgtccaactatagcatctgcaatagctgcagttaatgcactacacggg
aggtggtttgctggtaagatgatcacagctgcatacgtcccacttccgacttaccacagc
ctcttcccagactccatgacctccactcagcttctgtttcctgttcgtcgatga
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