Aquarana catesbeiana (American bullfrog): 141113670
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Entry
141113670 CDS
T11018
Symbol
ABCA5
Name
(RefSeq) cholesterol transporter ABCA5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
141113670 (ABCA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acat02000
]
141113670 (ABCA5)
Transporters [BR:
acat02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
141113670 (ABCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
ABC2_membrane
AAA_29
AAA_22
AAA_23
NB-ARC
SMC_N
ATP-synt_ab
AAA_5
Rad17
AAA_16
AAA_30
Motif
Other DBs
NCBI-GeneID:
141113670
NCBI-ProteinID:
XP_073463011
LinkDB
All DBs
Position
LG12:234796543..234926772
Genome browser
AA seq
1633 aa
AA seq
DB search
MTSEMKDVGVWAQTKTLLYKNYLVKCRTKKDTLQEILYPLIWSQIWLLLVLIMPNKYYEA
SPNDMLSDLEISPLPTIGYTPVTNTTENIMAVAWAPCLGSDVDIVPYHNEESLKAASSSF
LHFVGVKFEDPMSYKLMFFPFFIPKSTLYIQEHCFSSRCDAAQYHYSGFTHLQACIDSAI
IKLKTNHSAWRELTRTKVTIMEKLPMVEVDSYYHALMSICLAMAFLPFGCSPAAYIVAEK
EKKLKEFMKILGLHDTAFWLPWVLLYIVFILLVSILMACITTSLTPFSHSSWFLVFLLYA
LYGISLIMFALMLTPLFKKAKQAGGIAFLSTLLLSALGIFIVLKEDFPKSFVWFLSPFCQ
CTFMIGTAQVMILEQNGNGAQLFNLKDGPYPLIITYIFLVVDSVMYLLLASYLDQILPGE
YGLRRSPLFFLKPSYWSKRRRNYGVLSESFFSTNTVLSDVVEPVPLGLHGKEAIRIKNIH
KSFKKENRQMEALQGLTLDIYEGQITALLGHSGTGKTTLMNILCGLCPPSEGVATIFGHR
VTDIDEILDIRKMIGVCQQSDIHFEDLTVEENLSVFASLKGISKTCKELEINRILHDLDM
EAVKHNQVKRLNVGQQRKLAVAIAVLGNPKVLLLDEPTAGMDSCSRYTVWNVLKKRKANN
VIVFSTHCMEEADILADRKAVLSQGTLKCVGSSLFLKSKWGVSYRLSMDIKSSCNMASVS
ALVSQHIPGARLMLATENSLIYGLPLKDVDIFPGLFSALDNDCSLGILTYGVSVTTLEDV
FFRLEAESDVDQTDSNIFTHQKIDDDRKWKSTEDIDQGLLALPESDPCTVSGRALWKQQA
RTIAKLHFRNLYRDRKCVRNVCLSLFLFLAAQVAVNILHWYNHKHSVPIKLSPDLYFLRP
GQKSQKDLTSLLIQSSTGASIDEIIDHLHSQRIKVELMNGTDYMSVAPHSGGLDVISSEK
YFIYEVVFNSTMVHTLPVLINTISNTLLRQLNVNESIQVWSSPFPKEYLDVSYKITLYFL
VIYLGILAAGMLPYFAMENIYNHKVKAYTQLKMSGLYQSAYWVGQASVDMLFFLLILSIM
LGILFICNKGISLYVGTFVTLVFCIIGYVPAAVLLTYVASFMYKSISDTRQWWSIFFSMM
CLITITTVELVSVIGNDLIFTLCHDLFSLFIPIYPLIGCLICFLKKSWKVSGDENSYTQL
GRVLVAVLAPYIQCVILLLLLRHLEVKNGGKSIRKDSLFRTKDKKGKAWKFTEVPEDEDE
DVRTERARVGEYMASDSYEKPAIMVSGLHKEYNEKGKTIVGKTMRKLVVNNISFCVRKGE
ILGLVGPNGCGKSTILDMMVGQTEPNAGKIWVGDPGPTETAGGPIRYVGYAPQLNHLWPE
IRVQEHLETYGSIKGMSQSSLKEVIDRIVEALDMREDRQKPTKKLSAGAQRKLCFALSML
GNPDIVLLDEPSTGMDPKAKQQLWKVIRSAFKGKEQAAVLTTHIMEEAEAVCDRVAIMVS
GQLRYIGSVQHLKSKFGRHYSLELKLDADAGTQQMEILHREILKHFPNACRQESFASLMS
YKVPKEDVQSLSQAFFNLGQVKRTFNVEEYSFSQSTLEQVFIELAKEQEEEDNFATMNST
LCWNRRQEDSVAF
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgagatgaaagatgttggcgtttgggcgcaaaccaaaaccctcctctacaaa
aattacctggtcaagtgccgtacgaagaaggacacattgcaggaaatcctctacccgctg
atctggtcgcagatatggctgctgttggtgctgatcatgccaaataaatattacgaagcc
tcccccaatgatatgctcagcgatctggagataagtccgctgccgactatcggctacacg
ccggtgaccaacaccaccgagaacatcatggccgtggcgtgggcgccgtgtctcggatca
gatgtggatatcgtgccctaccacaatgaggagagtttaaaggccgccagctcttccttt
ctgcactttgttggcgtcaaatttgaagaccccatgtcctacaagctcatgttcttcccc
ttcttcatcccaaagtcaactttgtacatacaagaacattgcttctcctctcggtgtgat
gcggctcagtaccattattctggattcacacacctgcaagcctgcattgattccgccata
ataaagctgaagaccaatcactcggcctggagggagctgacgagaacaaaggtcacgata
atggagaagctgccgatggttgaagtggacagctactaccatgccctcatgtcaatatgc
cttgccatggccttcttgccatttggctgctcaccggcagcttatatcgtagccgaaaaa
gaaaaaaagctgaaagagtttatgaagatcctggggctccatgacacagcgttctggctg
ccatgggttctgctgtacatcgttttcattctgctggtctctatactgatggcctgtatc
accaccagcctgactccattcagtcacagcagctggttcttggtctttctgctctatgcc
ctctatggaatatctctgataatgttcgcattgatgttgacgccacttttcaaaaaggcc
aaacaagccggaggcatcgcgttcctctccactctcctcctcagtgctctgggtattttc
attgtgctgaaagaagactttccaaagtcctttgtgtggttcctcagtccgttctgtcag
tgtacgttcatgattggcaccgcccaggtcatgattcttgagcagaatggaaatggtgcc
cagctattcaatctgaaggatggcccctaccccctcatcatcacctatattttcctggtg
gtggacagtgtgatgtacctgctcctggcgtcataccttgaccagattctcccaggagag
tacggtttacgaaggtcacctctcttctttctgaagccatcttactggtcgaagaggagg
agaaattatggggtgctcagtgagagcttcttcagcaccaacaccgttctgagcgacgtg
gtggagcctgtaccgctaggcctgcatgggaaagaggccatcagaattaaaaatatccat
aagtctttcaaaaaggagaatcgtcagatggaggcattacaagggctcaccttggacata
tatgaaggacaaataacagctttgcttgggcacagtggcaccggcaaaacaacactgatg
aatattttatgtggtctctgcccgccgtctgaaggggtggccactatctttggacaccga
gtgaccgacatcgatgagattctggacatcaggaagatgattggagtctgccagcaaagt
gacattcacttcgaggacctgactgtagaggagaacctgtccgtcttcgcctcactgaag
gggatcagcaagacctgcaaggagctggagataaataggatcttgcatgatctggatatg
gaagccgtgaagcacaaccaggtgaagcgtctgaacgtggggcagcagaggaagctcgcc
gtggcgattgcggttctgggaaatcccaaggtgctgcttctggatgagcccacggcgggt
atggattcctgctcccgctacaccgtctggaatgtgttaaagaagaggaaggcgaacaat
gtcatcgtgttcagcacacactgcatggaggaagccgacatcctggcggacagaaaagcc
gtcctctcccagggaaccctgaaatgcgttggatcctctctgttcctcaagagcaagtgg
ggtgtcagctaccgcctcagcatggatataaaatcctcgtgtaacatggcgtctgtatct
gcgctcgtctcacagcacattcccggggcgcgtctgatgctggccactgagaactccctc
atctacggcttaccattgaaggatgtagacatcttcccaggattgttttcagctttagac
aatgattgcagcctgggaatcctgacctatggagtgtcggtcaccacgttggaggatgtc
ttcttcagactagaagcagaatctgatgtggaccaaacagacagcaatattttcactcat
cagaagatagacgatgacaggaagtggaaatccaccgaggatattgaccagggcctactg
gcccttccagagtccgatccttgcaccgtgagtggccgtgctctgtggaagcagcaagcc
cggaccatagccaagctacatttccgcaacttgtaccgagaccggaaatgtgtccgaaac
gtgtgtctgtctttattccttttcctggctgcccaggtcgcagtaaacattcttcactgg
tacaaccacaagcattccgttcccatcaagctgtctccggatctgtatttcctgcgtccg
ggacagaagagtcagaaggacctcaccagccttcttatccagagctccacaggtgccagt
atagatgagataattgaccacctgcacagccaaagaataaaggtggagctgatgaacggg
accgactatatgtctgtcgctcctcacagtggcggtttggatgtcattagttcagaaaag
tatttcatctatgaagtcgtgttcaatagtaccatggtgcacaccctaccggtccttatt
aacaccatcagtaacactctgctgagacagctgaatgtcaacgagagcatccaagtgtgg
agcagccctttccccaaggaatacttggatgtatcatacaagatcactctgtacttcctg
gtcatatatctgggaattttagctgctgggatgttgccttattttgccatggagaacatc
tacaaccataaggtgaaggcctacacccagctgaagatgtcgggcctctaccagtctgcc
tattgggttggacaagcttcggtggacatgctttttttcctgttgattctctccatcatg
ctgggaattttgttcatctgtaataagggaatttcactttatgtgggaacattcgttacc
ttggtcttctgcataatcggctatgttcctgcagcggtgctgctaacctacgtggcttcc
tttatgtacaaatccatcagtgacacccggcagtggtggtccattttcttttctatgatg
tgtctgatcaccatcaccacggtcgagcttgtctccgtcatcggcaacgatttgatattt
accctctgccatgacctgttctctttatttatccccatctaccccctgattggatgtttg
atctgcttcctaaagaaatcctggaaagtttcaggggatgaaaacagctacacacaactc
ggccgggtgttggtggcagttttagctccatacatacagtgcgttatcctgctgcttctc
ctgcgccacctagaggtaaagaatggaggaaaatcaattagaaaggattccctgttcagg
acgaaagacaagaaaggcaaagcatggaagttcaccgaggtcccggaggatgaagacgag
gacgtccggacagaaagagcgcgggttggcgagtacatggcatccgactcttatgagaaa
ccggccatcatggtgagtggattacacaaagagtacaatgagaaggggaagaccattgtg
gggaagacaatgaggaagctggtggtaaataacatctccttttgtgtaaggaaaggggag
attctcgggctggtggggcccaatggatgcgggaaaagcacaatcctggacatgatggtg
ggacagacggagccgaatgccgggaagatctgggttggagatccgggccccacggagaca
gcagggggccccatacgatatgtggggtatgcacctcaattaaaccatctatggccggag
atcagagtgcaggaacacctggagacctacggctccatcaaaggcatgagccagagtagc
ctgaaagaagtcatagacagaatagtagaagctctggacatgagagaggacaggcagaaa
cctaccaagaagctgtcagcgggagcccagagaaagctatgttttgccctgagcatgctg
ggtaatcctgatattgtgcttctggatgaaccttccacagggatggaccctaaagccaaa
caacaattgtggaaagtcatcagatctgcgttcaaagggaaggagcaggccgctgtcctc
accacgcatatcatggaggaggccgaagccgtctgtgaccgggtggccatcatggtttct
ggacagctgagatatatcggctcagtgcagcatctgaagagtaaatttggtcggcactac
agtctagagctgaagctggatgcagacgccgggacccagcaaatggagatcctacacagg
gagattctcaaacacttcccaaatgcctgccgccaggagagctttgcttcattgatgtca
tacaaagttccaaaggaggacgtccagtccctatcacaggccttctttaacctgggacaa
gtgaaacgtaccttcaatgtagaggagtacagcttctcccagtccacgctggaacaggtt
ttcatcgaactggctaaagagcaagaggaggaggacaattttgcaaccatgaacagcacg
ctctgttggaaccggagacaggaagactcggtggccttctaa
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