Aquarana catesbeiana (American bullfrog): 141113838
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Entry
141113838 CDS
T11018
Symbol
DDX5
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141113838 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acat03041
]
141113838 (DDX5)
03009 Ribosome biogenesis [BR:
acat03009
]
141113838 (DDX5)
Enzymes [BR:
acat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141113838 (DDX5)
Spliceosome [BR:
acat03041
]
Complex A
U1 snRNP components
U1 related factors
141113838 (DDX5)
Complex B
141113838 (DDX5)
Ribosome biogenesis [BR:
acat03009
]
Eukaryotic type
Pre-60S particles
Helicases
141113838 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
141113838
NCBI-ProteinID:
XP_073463254
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All DBs
Position
LG12:4885031..4900087
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AA seq
598 aa
AA seq
DB search
MPGFNDRGRGFGGAPRFGGNRNGSSGKYGNPGERLVKKKWNLDTLPKFEKNFYQEHPDLA
RRTPQEIQEFRRSKEITVRGLHCPKPVFAFHEASFPDNLMGVIRHQNFTDPTPIQSQGWP
VALSGLDMVGVAMTGSGKTLSYLLPGIVHINHQPFLQRGDGPILLVLAPTRELAQQVQQV
AAEYGRACRLRSTCIYGGAPKGPQLRDLERGVEICIATPGRLIDFLEAGKTNLDRCTYLV
LDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPREVRQLAEDFLKDYVHINIGALE
LSANHNILQIVDVCNDGEKDDKLVRLMEEIMSEKENKTIVFVETKRRCDDLTRRLRRDGW
PAMGIHGDKSQQERDWVLNEFKHGKSPILIATDVASRGLDVEDVKFVINYDYPNSSEDYI
HRIGRTARSTNTGTAYTFFTPNNAKQVNDLISVLREANQTINPKLLQMIEDRGGRFRGRG
GMNDRRDRFSSGKRGGWDRDNRGFGAKRDFGNKPQNGFGGETMNGNSYSNGYGMQGNQGG
YRGGAQNGSYQNYNAGQQYSTAIPNSMAPQAYTAYPIATAATTTPALIGYPMPAAYTQ
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgccaggattcaacgaccgaggccgcggatttggaggagcacccagatttggaggaaac
agaaatgggtcatctggaaagtatggaaatccgggtgagcggctcgtcaagaagaaatgg
aatttggatacattaccaaaatttgagaagaacttctatcaagaacaccctgacttagcc
cgacgcacaccgcaagaaatacaagaattcagaagaagtaaagagatcaccgtcagaggc
ttacactgccccaagcctgtgtttgctttccatgaagcaagtttccctgacaacctcatg
ggagtgatcaggcaccagaatttcaccgaccccacacctatccagagccagggctggccg
gttgctctgagcggactggacatggttggtgtcgccatgactggatctggaaaaacactt
tcttacctacttcctggaatcgtccacatcaatcaccaaccattcctacagagaggagat
gggccaattctcctggtgctggcacctacccgagagctggcacaacaagtgcagcaagtt
gcagctgagtatggcagggcttgccgtttaagatctacctgtatttatggaggagcaccc
aaaggaccacagcttcgtgacttagaaagaggtgttgaaatttgcattgcaactccgggc
agactaatcgacttcctggaagctgggaagaccaacctggacagatgcacatacctggta
cttgatgaagcagacagaatgctggatatgggttttgagccccaaatcaggaagattgtg
gagcagatcaggcctgacagacagaccctgatgtggagtgccacttggcctagagaagtc
aggcagcttgcagaagacttcttaaaggactatgtgcacattaatatcggtgcgctggaa
ctgagtgctaaccacaacatcctgcagattgttgatgtctgcaacgatggagaaaaggat
gacaagcttgtccgtctgatggaggagatcatgagtgagaaggaaaacaaaaccattgtg
ttcgtagagacaaagaggcgctgtgatgacctcacaaggagattacgtagagatgggtgg
cctgcaatggggatacatggtgacaaaagccagcaggagagagactgggtattaaatgag
ttcaagcatggcaagtcacccatcctcattgccacagatgtggcgtcccgtggtctagat
gtggaggacgttaaatttgtcatcaactacgactatccaaactcctctgaggattacatc
caccgtatcggccgcacggcccgcagcaccaacacgggcaccgcctacaccttcttcaca
cccaacaacgccaaacaagtcaacgacttgatctctgtgctgagggaggccaaccagaca
atcaatcccaaacttctccagatgattgaagacagaggagggcgcttcagaggccgtgga
ggaatgaacgaccgtcgtgacaggttctcttcaggcaagcggggcgggtgggaccgggat
aacagagggtttggtgctaagagagactttggaaacaagccccagaacggatttggtggg
gaaactatgaacggtaactcctacagcaacggctacggaatgcaaggcaaccaaggaggg
tatcggggaggcgcacagaacggctcctaccagaactacaatgccggacagcaatactcc
acagccatacccaacagtatggcaccacaggcatacacagcatacccaattgccactgcc
gccacaacaactcctgccctgataggttatcctatgccggcagcctacacacaataa
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