Aquarana catesbeiana (American bullfrog): 141113856
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Entry
141113856 CDS
T11018
Name
(RefSeq) cholesterol transporter ABCA5-like isoform X1
KO
K05651
ATP-binding cassette, subfamily A (ABC1), member 9
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
141113856
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acat02000
]
141113856
Transporters [BR:
acat02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
141113856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
SMC_N
RsgA_GTPase
Rad17
AAA_29
Motif
Other DBs
NCBI-GeneID:
141113856
NCBI-ProteinID:
XP_073463284
LinkDB
All DBs
Position
LG12:6276941..6376863
Genome browser
AA seq
1618 aa
AA seq
DB search
MTGGTGRETSLVQQTFVLLRKNILVQWRRLGNVVLEWVQHLALIFLLFVMLALRNGPSPS
AYPPAVVLGRLDEFSNKSFPVGYIPTTPAIRDIMQRVSRSPITPEISVQEFQNSSDLLDA
VHEIITAAVEFENEFTYFIRFHHYTIPNPNDYLARRGYCGTSENCRPLEYWKVGFISLQA
SIDSAIVQKNTKQSLWDGLAATEVVKMKSLDKTERPVLSMGTIIYELSMCFVSLSYLMTL
QIARERRKTRELMRMMGLKDLAFWLSWGLLYIISAIIIATLMALVATTYVFVQSSFGVIF
LLFSLYGIATVCFNCMLSALFRKHRLTAILGFFITLFLAAMGLLPLVNAIPKSLEVFLSI
FHPFSFAIGIVESMHMENDLQGAFFSDIGGDSSHILSSAIYLTLDSVLYIILTLYFDKII
PDKHGVRHNPLFCLSPSFWSKKKMTTVPLGEGEHIEEDSGDYAEKVPIELLGKEAIRISN
VKKMYSGKDKTTEALRGLSLDIYEGQITALLGHSGAGKTTLLNILCGMGRATGGSANIYG
HLLSDLSLRQEIQRKIGFCPQIDINFELLTVKENLEVFAQIKGVPRSKVKSEVEKVLSDL
DIENIEDLKANKLSGGQRRKLTLAIALLGDPKILLLDEPTAGLDPFSRHRVWSVLKERKV
GHVTLFSTQFMDEADILADRKAVLSNGRLKCVGSSFFLKQKWGIGYHLRMQVTPSCDTEA
ITSLIKQHVSSAKLSTHNVEDLTFTLPFPNMDAFPALFSDLEGHVGQNIVSYGVSITTLD
DVFLKLEGEAEIEKGDYGVFAQEQNEEEDHFSSEPEDSILLMSDSGTPTISGLALWRQQV
LAVARIRYLKVIHDIKGFRSILLLLVLFMLPLVTTTILVNSFHSTNTWELTPQLYFRRPG
DRAHRYYSNLLIVNTTGLSIENLVHGITAQNIAVDVLDGPYDENTTAYNGAIEITRGNNT
DYGYKIIGNPRAHNILPVLVNIISNAFMRVYNSTERIRVWNYPVIPDYWDYRSYAIFYMG
VTFMIYASGLAPHFAMTSMQDMKIKARSQLRISGLFPSAYWFGQALVDIALSWFLLFLMV
AILFAFSYSIHLSFFNAVLLIVEILGYGMAMVLYVYSITFLFGKRKIHHDRWSFFFILSS
FIPIIYNTFQFFIPLPKELYFIYLILVPPSNLMAFLINLVYLRDPYYIDMPTVYGQLVIP
YAQTIILWGLLWFLEWWIGTRSLKQDPVFRFTKREHPFTQNPEQLDDADEEVLAEKERVN
TLKTTDQEEERPTILVDSLRKEFKEKSGICGRFRKKKKRTAISNTSFCVKKGEVLGLLGP
NGAGKTTSVLILAGEKKPSAGQVLLGNAGDPHRTKDSAALGYCPQHNPLWPNLTVKEHLE
IYAAVKGMNKEDTNRAIKRVSEALEMKDHLNKPARKLSAGVSRKVCFAISMLGNPTIVLL
DEPSTGLDPKGQQRLWRAIRAAFKNRERGAILTTHYMEEAEAVCDRVAIMVSGKLRCIGS
IQHLKSKFGKGYLLEIKLKDTQQVDVIDQEVLRLFPQAARQDRFSSLLVYKIPMDNVQSL
SQAFLHLENAKKTYNIEEYSFSQSTLEQVFLELAKEQEKEDFHLDSSFRWKHLKSEEI
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgaccggggggacaggaagggagaccagcctcgtccagcagacctttgttctgctgcgg
aagaatattctggtacaatggaggcgtctgggaaatgtagtgctggagtgggtccagcat
ttggcgttgatcttcttgctcttcgtaatgctggctcttagaaacggtccaagcccaagt
gcgtacccaccagctgttgtcctggggcgcctggatgaattcagcaacaaaagttttcca
gttggctacatccctacaaccccagccatccgggacataatgcagagggtcagcagaagc
cccatcaccccagaaatatcagtgcaggaattccaaaattcttctgacctcctggacgca
gttcatgagatcatcaccgctgctgtggaatttgagaacgagtttacgtattttatcaga
tttcatcactacaccatcccgaaccccaatgactacttggctcgcagaggttactgtgga
acttcagaaaactgccgccccctggagtactggaaagtggggttcatctctctacaagcc
agcattgactctgccattgttcagaagaacaccaagcagtcgctgtgggatggtttggcg
gccacagaggtggtgaagatgaaatctttggataaaacagaaaggccggttctctccatg
ggcaccatcatctatgaattgagcatgtgcttcgtctcattgtcctatctcatgacgctg
cagattgcccgggagaggaggaaaaccagagagctgatgaggatgatgggactgaaggat
ctggcgttttggttgtcttgggggttgctgtacatcatcagtgccatcatcatcgccacc
ctcatggctctggttgccaccacttatgtgtttgtgcaaagttcctttggcgttattttt
ctgctcttcagcctctacggcattgcaacggtctgttttaactgcatgttgagcgccctc
ttcaggaagcaccgcctgacagcgattctgggatttttcatcactctcttcctagccgca
atgggcctccttcctctggtgaacgccatacccaaatctctggaagtttttctgagcatt
ttccaccccttctccttcgccatcgggatagtggagagcatgcacatggaaaatgacctt
caaggggccttcttctcagacatcggtggtgactcctcccacatactctccagcgccatc
tacctgactctggattcagtgctttatatcattctcactctctatttcgacaagattatt
ccagataaacacggagtaagacacaacccgctgttctgcctgagcccttcattctggtca
aagaagaagatgaccactgtaccgctaggagaaggagagcacatagaagaggactcgggg
gactatgcagaaaaagttcccattgagttactgggaaaagaagcgatcaggataagtaat
gtcaagaaaatgtacagcggcaaggacaagacgacagaggcgctacgaggtctgagtctg
gacatctatgagggacagatcacagcattactcggtcacagcggagctggaaaaacaaca
ttactgaatatactctgtgggatgggcagagccactggtgggtctgccaacatctatggc
catcttctatcagacctcagtcttcgtcaggagatccagagaaagatcggcttttgtccg
cagatcgatatcaactttgagcttctaacggtgaaggagaacttggaagtttttgctcag
attaaaggtgttcctagaagtaaagtgaaatccgaggtagaaaaggtcctttctgacctg
gacatagagaacattgaagacctgaaagccaataaactaagtggaggtcagaggaggaag
ctgaccctggcgattgcactattaggagaccccaagattctgttgctggatgaaccgacg
gctggtcttgaccccttctccaggcaccgtgtatggtctgttctcaaagagcgcaaagtt
ggccacgtcaccttattcagtacacagttcatggacgaagccgacatccttgcagaccgt
aaggctgtgctctccaacgggaggctgaaatgcgttggtagctcttttttcctaaagcaa
aaatggggcattggctatcacttgaggatgcaggtgaccccatcatgcgacacagaggcc
atcacatccctcataaagcagcacgtctccagtgccaaactcagcacacataatgtggag
gatttgacgttcaccctgccattcccgaacatggatgccttccctgctctgttctctgac
ctggagggacatgtgggccaaaacattgtaagctacggcgtctctattactacgctggat
gatgtgttcctgaaattggaaggagaggccgagatcgaaaaaggagattatggcgttttt
gcccaagagcaaaatgaagaagaggatcacttctcctcggagccggaagattctatcctt
ctgatgtcggactccggtacacccaccatcagtggactggcattgtggagacagcaggtg
ttggccgtggcgaggatacgatacttgaaagttatccatgacataaaaggctttcgatcc
atacttcttctgctggtattgttcatgcttcccctggttaccaccaccatactggtgaac
agtttccactccacaaacacctgggaactgactccacagctttacttccgaagacccgga
gatcgggcccacagatattactccaatcttctaatcgtcaacaccaccggtctttccatt
gagaatcttgttcatggtataacggctcaaaatattgcagtggatgttctggatggtccg
tatgatgaaaacactacggcctacaatggcgctatagagatcacacgaggcaacaacacg
gactacgggtacaaaataatcggaaacccccgagcacacaatatcctcccggtattggtt
aatattatcagtaacgcctttatgagggtctataactccacggagaggatcagggtgtgg
aattaccccgtcattcctgactactgggattacaggtcatatgcgattttctacatggga
gtgacgtttatgatctatgcgtctggacttgccccccactttgcaatgaccagcatgcag
gatatgaagatcaaagctcgctcccagctgcgtatttccggccttttcccatccgcgtac
tggtttggacaagccctggtggacatcgccctctcttggttcctccttttcctgatggtc
gccatcttgtttgcgttcagctattccatccatctgtcattctttaacgcggtgctgctt
attgtggaaattttgggttacggcatggccatggtcctctatgtttactcaatcacattt
ttatttgggaagaggaagattcatcatgaccgatggtccttcttctttatcttgtcttcc
ttcatcccgataatatacaacacatttcaatttttcattcctttgccaaaagaattatat
ttcatctacttgatcttggtgccacccagcaatttgatggcgtttttgatcaatctggtt
taccttcgtgatccttattacattgatatgccaactgtgtacggccagctggtgattccg
tacgcacaaaccatcatactctggggcctcctgtggtttctggaatggtggattggaacc
agaagtttaaaacaagatccggtattcagattcaccaagagagaacatccatttacccag
aatcccgagcaactggatgatgccgatgaggaggtccttgctgagaaagaaagggttaac
actttaaaaacaacagatcaggaggaggagaggccgaccatcctcgtggacagtttgcgt
aaagagtttaaggagaagtcaggcatctgtggacgcttcaggaagaagaagaagagaacg
gccatcagtaacacctcgttctgcgtcaagaaaggtgaagtcctgggacttctgggcccc
aacggtgctggcaagaccacatctgtgctgattctggcaggagagaagaaaccatcagct
ggacaggtgttgctgggtaatgcaggagacccccataggactaaagactctgcagctttg
ggctactgtccccaacacaaccctctgtggcccaacctcactgtgaaggaacatctggag
atctacgccgctgtgaagggcatgaataaagaggacacaaaccgtgctattaaacgggtg
agtgaagctctggagatgaaggaccatctcaacaaacctgccaggaagttgtcagctggg
gtctccagaaaggtgtgttttgccatcagcatgttgggtaatcccaccattgttctcctg
gacgaaccttccactggtctggacccaaaaggacaacaaaggctttggagagccatccga
gcggccttcaagaacagggaaaggggtgccatcctgaccacacactatatggaggaggcc
gaggctgtgtgcgaccgcgtggcaatcatggtgtctggaaaactcaggtgtatcggatcc
atccaacatctgaagagcaaatttggtaaaggttacctcctggagatcaaactgaaggac
acccagcaggttgatgtgattgaccaggaggtcctccgcctcttcccgcaagccgccagg
caggacaggttctcctctttgttggtctataagatcccaatggataacgtccagtctctg
tcccaggccttcctacacttggagaatgctaaaaaaacgtataacatcgaggagtacagc
ttctcccagtccaccctggagcaggtcttccttgagttggccaaagaacaggagaaggaa
gacttccacttggattcatcattcagatggaaacacctgaagagcgaagagatataa
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integrated database retrieval system
