Aquarana catesbeiana (American bullfrog): 141113858
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Entry
141113858 CDS
T11018
Name
(RefSeq) cholesterol transporter ABCA5-like isoform X1
KO
K05651
ATP-binding cassette, subfamily A (ABC1), member 9
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
141113858
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acat02000
]
141113858
Transporters [BR:
acat02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
141113858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
SMC_N
RsgA_GTPase
Rad17
AAA_29
ABC2_membrane
AAA_23
Motif
Other DBs
NCBI-GeneID:
141113858
NCBI-ProteinID:
XP_073463289
LinkDB
All DBs
Position
LG12:6162154..6259531
Genome browser
AA seq
1618 aa
AA seq
DB search
MTGGTGRETSLVQQTFVLLRKNILVQWRRLGNVVLEWVQHLALIFLLFVMLALRDAPSPS
AYTPAVVLGRLDEFSNESFPVGYIPTTPAIRDIMQRVSRSQITPEISMQEFQNTSDLQDA
VYGNITAVVEFENEFTYFIRYHYYIIPNPNDYLAHRGYCETSESCRPLEYWKVGFISLQA
SIDSAIVEKNTKQSLWDGLAATEVVKMKSLDLTERPVLFMGTIIYDLSMCFVSLSYLMTL
QITRERRKTRELMRMMGLKDLAFWLSWGLLYIISAIIIATVMALVATTYVFVQSSFGVIF
LLFSLYGIATVCFNCMLSALFRKHRLAAILGFFITLFLAALGLLPLVNAIPKSLEVFLSI
FHPFSFAVGIVESMHMENDFQGAFFSDIGGDSSHILSSAIYLTLDSVLYIILTLYFDKII
PDKHGVRHNPLFCLSPSFWSKKKMTPVPLGEGEHIEEDSGDYAEKVPIELLGKEAIRISN
VKKMYSGKDKTTEALRGLNLDIYEGQITALLGHSGAGKTTLLNILSGMGGATGGSANIYG
HPLSDLSHRQEIQRKIGFCPQIDINFELLTVKENLEVFAQIKGVPRSKVKSEVEKVLCDL
DIENIEDLRANKLSGGQRRKLTLAIALLGDPKILLLDEPTAGLDPFSRHRVWSVLKERKV
GHVTLFSTQFMDEADILADRKAVLSNGRLKCVGSSFFLKRKWGIGYHLRMQVTPSCDTEA
ITSLIKQHVSSAKLSTQNVEDLTFTLPFLNMDAFPALFSDLGGHVGQNIVSYGVSINTLD
DVFLKLEGEAEIEKGDYGVFAQEQNEEEDHFSSEPEDSILLMSDSGTPTISGLALWRQQV
LAVARIRYLKLIHDIKGFRSILLLLVLFILPLVTTTILVNNFHSTNTWELTPQLYFRRPG
DRAHRYYSNLLLVNTTGLPIENLVHGITAQDIAVDVLDGPYDENTTAYNGAIEITLDNNT
DYGYTIIGNPRAHNILPVLVNIISNAFMRVYNTTERIRVWNYPIVPDYRDRSSFEIFYMG
LVSMIFASGLAPHFAMTSMQDMKIKARSQLRISGLFPSAYWFGQALVDITLYWLLLFLMV
AILFAFSYSVHLSFFNTVLLIVEILGYGMATVLYVYSITFMFWKRKIHHDRWSFFFILSS
LIPIIYNLFTFFVPVSEELYFIYLILVPPSNLMAFLINLVYLHDPYYIDMPTVYGQLVIP
YAQTIILWGLLWFLEWWIGTRSLKQDPVFRFTKREHPFTQNPEQLDDADEEVLAEKERVN
TLKTTDQEEERPTILVDSLRKEFKEKSGICGRFRKKKKRTAISNTSFCVKKGEVLGLLGP
NGAGKTTSVLILAGEKKPSAGQVLLGNAGDPHRTKDSAALGYCPQHNPLWPNLTVKEHLE
IYAAVKGMNKEDTSRAIKRVSEALEMKDHLNKPARKLSAGVSRKVCFAISMLGNPTIVLL
DEPSTGLDPKGQQRLWRAIRAAFKNRERGAILTTHYMEEAEAVCDRVAIMVSGKLRCIGS
IQHLKSKFGKGYLLEIKLKDTQQVDVIDREVLRLFPQAARQDRFSSLLVYKIPMDNVQSL
SQAFLHLENAKQTYNIEEYSFSQSTLEQVFLELAKEQEKEDFHLDSSFQWKHLKSEEI
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgaccggggggacaggaagggagaccagcctcgtccagcagacctttgttctgctgcgg
aagaatattctggtacaatggaggcgtctgggaaatgtagtgctggagtgggtccagcat
ttggcgttgatcttcttgctcttcgtaatgctggctcttagagacgctccaagcccgagt
gcgtacacaccagccgttgtcctggggcgcctggatgaattcagcaatgaaagttttcca
gttggctacatccctacaaccccagccatccgggacataatgcagagggtcagcagaagc
caaatcaccccagaaatatcaatgcaggaattccaaaatacttctgacctccaggacgca
gtttatgggaacatcaccgctgttgtggaatttgagaacgagtttacgtattttatcaga
tatcattactacatcatcccgaaccccaatgactacttggctcacagaggctactgtgaa
acttcagaaagctgccgccccctggagtactggaaagtggggttcatctctctacaagcc
agtattgactctgccattgttgagaagaacaccaagcagtcgctgtgggatggtttggcg
gccacagaggtggtgaagatgaaatctttggatctcacagaaaggccggttctgttcatg
ggcaccatcatctatgacttgagcatgtgcttcgtctcattgtcctatctcatgacgctg
cagattacccgggagaggaggaaaaccagagagctgatgaggatgatgggactgaaggat
ctggcgttttggttgtcttgggggttgctgtacatcatcagtgccatcatcatcgccacc
gtcatggctctggttgccaccacttatgtgtttgtgcaaagttcctttggcgttattttt
ctgctcttcagcctctatggcattgcaacggtctgttttaactgcatgttgagcgccctc
ttcaggaagcaccgtctggcagcaattctgggatttttcatcactctcttcctagctgcg
ttgggcctccttcccctggtgaacgccatacccaaatctctggaagtttttctgagcatt
ttccaccccttctccttcgctgtcgggatagtggagagcatgcacatggaaaatgacttt
caaggggccttcttctcagacatcggtggtgactcctcccacatactctccagcgccatc
tacctgactctggattcagtactttatatcattctcactctctatttcgacaagattatt
ccagataaacacggagtgaggcacaacccgctgttctgcttgagcccttcattctggtca
aagaagaagatgacccctgtaccgctaggagaaggagagcacatagaagaggactcgggg
gactatgcagaaaaagttcccattgagttactgggaaaagaagcgatcaggataagtaat
gtcaagaaaatgtacagcggcaaggacaaaacgacagaggcgctacgaggactgaatctg
gacatctatgagggacagatcacagcgttactcggtcacagtggagctggaaaaacaaca
ttactgaatatactcagcgggatgggcggagccactggtgggtctgccaacatctatggc
catcctctatcagacctcagtcatcgtcaggagatccagagaaagattggcttttgtccg
cagatcgatatcaactttgagcttctaacggtgaaggagaacttggaagtttttgctcag
attaaaggagttcctagaagtaaagtgaaatccgaggtagaaaaggtcctttgtgacctg
gacatagagaacattgaagacctgagagccaataaactgagtggaggtcagaggaggaag
ctgaccctggcgattgcactattaggagaccccaagattctgttgctggatgaaccgacg
gctggtcttgaccccttctccaggcaccgtgtatggtctgttctcaaagagcgcaaagtt
ggccacgtcaccttattcagcacgcagttcatggacgaagctgacatccttgcggaccgt
aaggctgtgctctccaatgggaggctgaaatgcgttgggagttcttttttcctaaagcga
aaatggggcatcggctatcacttgaggatgcaggtgaccccatcatgtgatacagaggcc
atcacatccctcataaagcagcatgtctccagtgccaaactcagcacacagaatgtggag
gatttgacgttcaccctgccattcctgaacatggatgcctttcctgctctgttctctgac
ctggggggacacgtgggccaaaacattgtaagttacggagtctctattaatacgctggat
gatgtgttcctgaaattggaaggagaggccgagatcgaaaaaggagattatggcgttttt
gcccaagagcaaaatgaagaagaggatcacttctcctcggagccggaggattctatcctt
ctgatgtcggactccggtacacccaccatcagtggactggcattgtggagacagcaggtg
ttggccgtggcgaggatacgatacttgaaacttatccatgacataaaaggctttcgatcc
atacttcttctgctggtattgttcatccttcccctggttaccaccaccatactggtgaac
aatttccactccacaaacacctgggagctgactccacagctttacttccgaagacctgga
gatcgggcccacagatattactccaatcttctgctcgtcaacaccactggtcttcccatt
gagaatcttgttcatggtatcacggctcaagatattgcagtggatgttctggatggtccg
tatgatgaaaacactacggcctacaacggcgctatagagatcacactagacaacaacacg
gactacgggtacacaataatcggaaacccccgagcacacaatatcctcccagtattggtt
aatattatcagtaacgcctttatgagggtctataacaccacggagaggatcagggtgtgg
aactaccccattgtgcctgactacagggatcgctcatcatttgagattttctacatggga
ttggtgtctatgatctttgcgtctggacttgccccccactttgcaatgactagtatgcag
gatatgaagatcaaagctcgctcccagctgcgtatttccggccttttcccatccgcgtac
tggtttggacaagccctggtggacatcactctctattggctcctccttttcctgatggtc
gccatcctgtttgcgttcagctattccgtccatctgtcattctttaacacggtgctgctt
attgtggaaattttgggttacggcatggccacggtcctctatgtttactcaatcacattt
atgttttggaagaggaagattcatcatgaccgatggtccttcttctttatcttgtcctcc
ctcatcccgataatatacaacctatttacatttttcgttcctgtgtcagaagaattatat
ttcatctacttgatcttggtgccgcccagcaatttgatggcgtttttgataaatctggtt
taccttcatgatccttattacattgatatgccaactgtgtacggccagctggtgattccg
tacgcacaaaccatcatactctggggcctcctgtggtttctggaatggtggattggaacc
cgaagtttaaaacaagatccggtattcagattcaccaaaagagaacatccatttacccag
aatcccgagcagctggatgatgctgatgaggaggtccttgctgagaaagaaagggttaac
actttaaaaacaacagatcaggaggaggagaggccgaccatcctcgtggacagtttgcgg
aaagagtttaaggagaagtcaggcatctgtggacgcttcaggaagaagaagaagagaacg
gccatcagtaacacctcgttctgcgtcaagaaaggtgaagtcctgggacttctgggcccc
aacggagccggcaagaccacatctgtgctgattctggcaggagagaagaaaccatcagct
ggacaggtgttgctgggtaatgcaggagacccccataggactaaagactctgcagcattg
ggctactgtccccaacacaaccctctgtggcccaacctcaccgtgaaggaacatctggag
atctacgctgctgtgaagggcatgaataaagaggacacaagccgtgctattaaacgggtg
agtgaagctctggagatgaaggaccatctcaacaaacctgccaggaagttgtcagctggg
gtctccagaaaggtgtgttttgccatcagcatgttgggtaatcccaccattgttctcctg
gacgaaccttccactggtctggacccaaaaggacaacaaaggctttggagagccatccga
gcggccttcaagaacagggaaaggggtgccatcctgaccacacactatatggaggaggcc
gaggctgtgtgtgaccgcgtggcaatcatggtatctggaaaactcaggtgtatcggatcc
atccaacatctgaagagcaaatttggtaaaggttacctcctggagatcaaactgaaggac
acccagcaggttgatgtgattgaccgggaggtcctccgcctcttcccgcaagccgccagg
caggacaggttctcctccttgttggtctataagatcccaatggataacgttcagtctctg
tcccaggccttcctacacttggagaatgctaaacaaacgtataacatcgaggagtacagc
ttttcccagtccaccctggagcaggtcttccttgagttggccaaagaacaggagaaggaa
gacttccacttggattcatcattccaatggaaacacctgaagagtgaagagatataa
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integrated database retrieval system
