KEGG   Aquarana catesbeiana (American bullfrog): 141113888
Entry
141113888         CDS       T11018                                 
Symbol
CSTF1
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
acat  Aquarana catesbeiana (American bullfrog)
Pathway
acat03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:acat00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    141113888 (CSTF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acat03019]
    141113888 (CSTF1)
Messenger RNA biogenesis [BR:acat03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     141113888 (CSTF1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_Gbeta CSTF1_dimer Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_EML Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C NBCH_WD40 Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_VPS8 Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_NWD2_C VPS8_N PROPPIN Beta-prop_HPS5 Beta-prop_WDR75_2nd Frtz
Other DBs
NCBI-GeneID: 141113888
NCBI-ProteinID: XP_073463322
LinkDB
Position
LG12:complement(10662759..10680413)
AA seq 431 aa
MFRYKITLKDRHQLYKLIISQLLYDGHLNIANGLINELKLTSGCAPSEQLLHLIKVGMEN
DDSTVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPNEQILASGSKDYTLKLFDYSKPSAKRAFKFIQEAEMLRSISFHPSGDFIIVGTQHPT
LRLYDVNTFQCFVSCNPQDQHTDAICSVNYNPTANTYVTCSKDGSIKLWDGVSNRCVNTW
DKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRMLVKYTGAGLSGRQVHRTQAV
FNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR
ARFWYRRSTTD
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgttcagatacaaaatcacgctgaaagatcgccaccagctctacaagctgatcatcagc
cagctcctctatgatggacacctcaacatcgccaacggcctgatcaacgagctcaagctg
acttccgggtgcgccccgtctgagcagctcctccacctcatcaaagtgggtatggaaaac
gacgacagcaccgtgcagtacgccattggccgttcggatacggtggcccccggaaccggg
atcgacctggagtttgacgccgacgtgcagaccatgtcgccggaggcctcggagtacgag
acgtgctacgtcacctcccacaagggcccctgccgcgtggccacgtacagccgcgacggt
cagctgatcgccaccggctccgccgatgcctccatcaagatcctggacacggagaggatg
ttggccaagagcgcaatgccgatagaggtgatgatgaacgagaccgcccaacagaacatg
gagaaccatcccgtcatccgcactttgtatgaccacgtggatgaagtcacgtgtctggcg
ttccacccaaatgagcagatcttagcttcgggatccaaagactacaccctgaaactattc
gattactccaaaccgtcagccaaaagagcctttaaattcatccaggaagcagagatgttg
cgatcgatttcgtttcacccgtcgggagacttcatcattgtcggcacgcaacacccaacc
ttgcgcctttacgacgtcaacaccttccagtgcttcgtctcctgcaaccctcaggatcag
cacacggatgccatctgctcggtcaactacaaccccaccgccaacacctacgtcacctgc
agcaaggacggcagcatcaagctgtgggacggcgtgtccaaccgctgcgtcaacacgtgg
gacaaggcccacgacggggccgaggtgtgctccgccatcttctccaagaattccaagtac
atcctgtccagcgggaaggactctgtggccaagctgtgggagatctccacaggaaggatg
ctggttaagtatacaggcgccgggctgagcggacgccaggttcaccggactcaagccgta
ttcaaccacaccgaagactacgtccttctccccgacgaacggacgatcagcctgtgctgc
tgggactccaggacggccgaacgccgcaacctcctctcgttgggtcacaacaacatcgtg
cgctgcatcgtgcactctcccaccaaccccggattcatgacttgcagcgacgacttccga
gcccgcttctggtaccgccgctccaccacagactga

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