Aquarana catesbeiana (American bullfrog): 141113995
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Entry
141113995 CDS
T11018
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141113995 (PRPF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acat03041
]
141113995 (PRPF6)
Spliceosome [BR:
acat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
141113995 (PRPF6)
Complex C
U5 SnRNP specific factors
141113995 (PRPF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
HAT_PRP39_C
TPR_16
Suf
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
TPR_17
TPR_2
TPR_1
TPR_8
FAT
ARM_TT21_2nd
ARM_TT21_C
ARM_TT21_N
TPR_9
ARM_TT21_5th
TPR_12
Motif
Other DBs
NCBI-GeneID:
141113995
NCBI-ProteinID:
XP_073463514
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All DBs
Position
LG12:23330466..23370605
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AA seq
972 aa
AA seq
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MAASSSAGSGPGPSGAGNPGGVSGLTASITGTMNKKKKPFLGMPAPLGYVPGLGRGATGF
TTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKNQADDDDEDLNDTNYDEFNGYAGSLF
SSGPYEKDDEEADAIYAALDKRMDERRKERREQREKEEIEKYRMERPKIQQQFSDLKRKL
AEVTEEEWLSIPEVGDARTKRQRNPRHEKLTPVPDSFFAKHLQTGENHSSVDPRQTQFGG
LNTPFPGGLNSPYPGGMTPGLMTPGSGELDMRKIGQARNTLMDMRLSQVSDSVSGQTVVD
PKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKVQVAR
NLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAICHLPQSVRIYIRAAELETDLRAK
KRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECCPTSVELWLALARLETYENA
RKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIVDRAITSLRANGVEINREQWIQD
AEECDKAGSVVTCQAVTRAVIGIGIEEEDRKHTWMEDAESCVSHGALECARAIYAYALQA
FPMKKSVWLRAAYFEKNHGTRESLETLLQRAVAHCPKAEVLWLMGAKSKWLAGDVPAARS
ILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLG
KVDAALELCEEALRHYEDFPKLWMMMGQIEEQREQMEKARESYNQGLKKCPHSSPLWLLL
SRLEEKIGQLTRARAILEKSRLKNPKTPELWLESVRLEFRAGLKNIANTLMAKALQECPN
SGILWAEAIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKISKARDWFHRTVK
IDSDLGDAWATFYKFELQHGTEEQQEEIRKRCENAEPRHGELWCAVSKDIVNWQNKIGEI
LILVASKIKNAF
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcctcgtctgctggaagcggccccgggccctcaggggccgggaatcccgga
ggggtgtccggactgaccgcctctattaccggtaccatgaacaagaagaagaaaccgttc
ctgggcatgccggccccgctgggatatgtgccgggtctgggcagaggtgccacaggtttc
accactcgttctgatattggtccggcccgtgatgccaatgacccagtggacgatcgccat
gccccaccaggaaaaaggacagttggggaccagatgaagaaaaatcaggctgatgatgac
gatgaagatttgaacgacaccaactatgatgagtttaatggctatgctggcagtttgttc
tccagcggcccatacgagaaggatgatgaagaggcggatgccatctatgccgcattggac
aaaagaatggatgaaagacggaaagagagaagagaacaaagagagaaagaagaaattgaa
aaatatcgtatggaaagacccaaaatccagcagcagttttcagatttaaagaggaaatta
gctgaagtgacagaagaagagtggctgagcatccccgaggttggcgacgcccggaccaag
cgccagcgaaatcctcgccatgagaaactcactccagtccccgacagtttctttgctaaa
cacttgcagacgggggagaaccactcatctgttgatccacgacagacgcaatttgggggg
ttgaacacccctttcccaggtggcctgaattccccgtacccaggaggaatgacgccaggc
ttgatgacacccggctctggagaactggacatgaggaaaatcgggcaggccagaaatacc
ctgatggacatgaggttgagccaggtgtcagactctgtgagtggccaaactgtggttgat
cccaaaggttatctgactgatctaaactctatgatccccacccacgggggagacatcaat
gatattaagaaagctcgtctgctgctgaaatctgtgcgagaaaccaaccctcaccaccca
cccgcctggatcgcatctgcccgtctggaggaagttactggcaaggtgcaagtggctcgc
aatctcatcatgaaaggaacagaaatgtgtcctaagagtgaagacgtatggctggaagca
gcccgtctccaaccaggagacacggcaaaggctgttgtggcccaggccatttgtcacctt
ccgcagtctgtccgtatctatatccgagctgctgagctagaaactgaccttcgagccaaa
aagcgggtgctgcggaaagctcttgagcatgttccaaactctgtccgtctgtggaaggcc
gctgtggaactggaggagcctgaggacgcgaggatcatgcttagccgcgctgtagaatgc
tgccccactagtgtagagttgtggttggccctggccaggttggagacctatgagaatgcc
cgtaaggtcttgaacaaggctcgagagaacatccctactgacagacacatctggattaca
gccgccaaactggaggaagccaacggaaacacacagatggtggaaaagattgtggacaga
gccatcacatctctgagagccaacggagtagaaatcaaccgagaacagtggatacaggac
gcagaggagtgtgacaaagcaggcagtgtggtaacatgccaagctgttaccagggcagtc
attggaattggaatagaagaggaggacaggaaacacacgtggatggaggatgctgaaagt
tgtgtatctcatggtgcactggagtgtgcccgtgctatctacgcatatgccctgcaggca
ttccccatgaagaagagcgtgtggctgcgggctgcctactttgaaaagaatcatggaaca
agggagtccctggagaccctcctgcagagagctgtcgcccattgtccaaaggctgaggtt
ctgtggctgatgggtgccaagtctaaatggctggcaggtgatgttccagctgctaggagt
atcctcgctcttgccttccaggccaacccgaacagcgaggagatttggctggctgccgtg
aagttggaatctgaaaataatgaatatgagcgtgcccgaaggctgctggcaaaggctaga
agcagtgctcccaccgccagggtgttcatgaaatcagtcaagctggagtgggtgctgggg
aaagtagatgccgcactggaactgtgtgaagaggcattgcgtcactatgaggatttccct
aaactctggatgatgatggggcagatcgaggagcagagagagcagatggaaaaagcgaga
gaatcttacaatcaggggctgaagaagtgcccacactcctccccgctgtggcttttgctt
tctagattggaggagaagataggacagctgaccagggctcgggctattctggaaaaaagt
cgtctaaaaaacccaaagacccctgaactatggttggagtcagtacgtctagagttcaga
gctgggctaaagaatattgccaataccctgatggccaaggctctgcaagagtgtcctaat
tcaggaatcctctgggcagaagccatatttctagaagccagaccacagagaaaaacaaag
agcgttgatgccctgaagaagtgtgaacatgacccccatgtactattggcagtagccaag
ctattctggagcgagcgtaagatctccaaagcgcgggattggtttcatcgtacagtgaag
attgactctgacctcggcgatgcctgggcaacattctataagtttgagctgcagcacggt
acagaggagcagcaggaggaaatccgtaaacgttgtgaaaatgcagagccgcgtcatggc
gaactttggtgcgcagtgtcaaaggacatcgtaaactggcaaaacaaaataggggaaatt
ctcatcctggtggcttccaaaataaagaatgcattctga
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