Aquarana catesbeiana (American bullfrog): 141114364
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Entry
141114364 CDS
T11018
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03013
Nucleocytoplasmic transport
acat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141114364 (CASC3)
03015 mRNA surveillance pathway
141114364 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acat03019
]
141114364 (CASC3)
Messenger RNA biogenesis [BR:
acat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
141114364 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
141114364
NCBI-ProteinID:
XP_073464102
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All DBs
Position
LG12:complement(67799241..67852980)
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AA seq
691 aa
AA seq
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MADRRRRRRRASQDSEEEEEESGSESAGSEEKPALPGKSEPREVVVPVREGDKSECESED
GIGDGDAVLSDYESAEESEEEEPHLSEEEALKATLKPENTAVEETTAVATTTTAATTTTK
EEKLKTKGAVTGERQSGDGQESTEPDENKVSKKTQKQLDDDEDRKNPAYIPRKGLFFEHD
LRGHTNDEEVRPKGRHPRKLWKDEGRWVHDRFREDEQAPKSRDELIAMYGYDIRSSKNPE
EIRTRRPRKPRYTSPSRREDQEEKPIRQSNRYYDSDSVPPPRTYNSRNSPGNNRAVSNRT
YSRPGGYKENRPVSYPPEDIVAPPPTSERRQDYGGYRARSVEQAPQLPDDEPPEMGMPNK
VEPANEKTADPSPPPPDRPVEKKSYSRARRSRIKVGEAGKSIEDTTFPELPPPPPPQMPT
EVVPEPSPPIPVVKPGGWEPPVEGGLTGLEQDMSQVNIADQNWTPGQSPYVSTRIPNHIH
MPGAPPQYGRMEGMGVQSGRVKRYSSQRQRPVPDPAPAPMHISLMEGHYYDPLQFQGPIY
AHTDGSSPLPPQGMIVQQEMHLPHPGLHPHQSPAPMTTPSLYPAPVSIPPGQPPPQQLLP
PPYFTAPPGVINFGNPAYPYPPGALPPPPPPHLYPNTQAQSQVYGGVTYYNPVVQQQVQP
KPSPPRRTSQPVTIKPPPPEENRNLKMTREG
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggaggcggcggaggagacgtgcgtcccaggacagcgaggaggaggaagaa
gagtccggcagcgagagcgcgggctccgaggagaagccggccctaccggggaaaagtgag
ccccgagaggtcgtggtgcctgtcagagagggagacaagtccgagtgtgaaagcgaagat
ggtattggcgatggtgatgccgtgttgtcagactacgaaagtgctgaggagtctgaagag
gaagagcctcacttaagtgaggaggaagcactcaaagctaccctaaaaccagaaaacaca
gctgtcgaggagaccaccgccgtcgccaccaccaccaccgctgccaccaccaccacaaaa
gaggaaaagcttaagacaaaaggagctgtaacaggggagcgtcagagtggagatggacag
gagagcactgagcctgatgaaaataaggtctccaagaagactcagaagcaattggatgat
gatgaagacaggaagaatcctgcatacatccctcgtaaggggctcttctttgaacatgat
ctacgtggacacacaaatgatgaggaagtaagaccaaagggtcgccatccacgcaagttg
tggaaagatgagggacgatgggtacatgatcggtttcgggaggatgagcaagctccaaag
tctcgggatgaactgattgccatgtacggttatgatattcggtcttctaaaaacccggag
gaaattcgtacacgccgaccaagaaagccaagatacaccagcccctccagaagggaagac
caggaggaaaagccaatcaggcagtcaaaccgttattatgattccgattctgtcccccca
ccccgaacctacaacagtcgcaattcccctgggaacaatagagctgtttcaaataggacc
tactcacggccaggtgggtacaaggagaatcgtcctgtcagttacccaccagaggacatt
gttgctccaccacctacttctgagcgaaggcaggattatggaggttatagagcccggagc
gtagagcaagcaccgcaactaccagatgacgagccccctgaaatgggaatgcctaacaaa
gttgaaccagcaaatgagaaaacggctgatccatcaccaccacctcccgatcgacctgtg
gagaaaaagtcctattctagagccaggaggagtcggattaaagttggggaggctggaaag
agcatagaagacactacattccctgaactgcctcctccccctccaccacagatgcccact
gaggtggttccagagccttccccacccatacctgtagtgaaacctggtggctgggaacct
cctgtagaaggtggtttgactggactagagcaggacatgtcacaggtcaacattgcagac
cagaactggacccctgggcaatcgccgtacgtttcaacacgtattccgaatcacattcac
atgcctggagcacccccacaatatggccgcatggagggaatgggagttcaaagtggccgt
gtcaagaggtattcctctcagcgtcagaggccggttcctgatcctgctcccgctccaatg
cacattagccttatggaaggtcattactatgacccactccaattccaaggaccaatatat
gctcacactgatggctcttcccctttgccccctcagggcatgattgtacagcaagaaatg
caccttccccacccaggtttgcacccgcaccagtctcccgcccccatgactaccccaagc
ctttaccctgcaccagtctccattcctccaggccagcctcccccacagcagttgctgccc
ccaccatacttcactgctccccctggagtcattaattttggcaacccagcctacccttat
cccccaggtgcattacccccaccaccaccacctcatctctaccccaatacacaggcacag
tcacaggtgtatggaggagtgacgtattataaccctgtcgtacaacagcaagtgcagcca
aaaccttccccgccccgacggacgtcgcagcctgtcactatcaaaccacctccaccagag
gaaaatagaaacttgaagatgacaagagaaggctag
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