Aquarana catesbeiana (American bullfrog): 141115090
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Entry
141115090 CDS
T11018
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141115090 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acat03019
]
141115090 (FIP1L1)
Messenger RNA biogenesis [BR:
acat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
141115090 (FIP1L1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
141115090
NCBI-ProteinID:
XP_073464545
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Position
LG01:complement(822575936..822709016)
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AA seq
636 aa
AA seq
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MAACGLSRLSRDVLRVLQSLEGNGESLAVTGWPDLAIVASRSPVAKMSAGGEVLERMVVS
AEMSGSSPVAAVPSSTTSSTTAVATSTVTAGGGGGVGDEEEEWLYGEENEAAGPDDDEED
ITSSHPVTSVEAETTENGVVKPVTETEDDSDSDSDDDDDDVHVTIGDIKTAPQYGSYGTA
PVNLNIKTGGRIYGPAGGKGKGVDLDAPGSINGVPLVEVDLDSFEDKPWRKPGADLSDYF
NYGFNEETWKAYCEKQKRLRMGLEALPVSSTTNKITVQQGRTGNSEKETVIQTTKPEFTS
PTSLFKSNAAPPSRKLSGTIDVIGQTTTITRVEGRRRGANESNIQVVTEQSPSEVDNFIK
PPPPFFPPGAPPTHLPPPPLFPPPPNVSTAPPLIPPPGSGLQLSFSMQKPSRYGIPITVP
PPGFPPPHGGPPPSLIPTIESGHSSGYDGRSTPAFPYGSVSFPHMPGSGGPWSSMVETSK
PWDYYPRRDKERDRERDRDRERERDRERERERPRERERERERERDRDHSPSVGAYNSEEE
RYRYKEYAERPERGYERHRERISREKEERHRERRHREKEESTRHKSSRSSSRRRHDSEEG
DSHRRHKHKKSKRSKEGKDAGSEPAPEPESVETSAD
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctgcggtctctctagactgtcacgtgatgtccttcgggtcctccaatcactg
gaaggtaatggcgagtctctggccgtcacaggctggccagatctcgcgatagttgcttct
cgcagtcctgtagcaaagatgtccgccggcggagaggtgctggagcggatggtggtttcg
gcggagatgagcggctccagccctgttgccgccgttccgtcatcaaccacctcctctaca
actgccgtcgccaccagcaccgtgaccgcgggcggaggaggaggagtcggggatgaggag
gaagagtggctctatggggaggaaaatgaagctgcaggaccagatgatgatgaagaggat
ataacaagctctcatccagtaaccagtgttgaagctgaaactactgaaaatggtgttgta
aaaccggtgactgagacagaagatgacagtgacagtgatagcgatgatgatgacgacgat
gttcatgttactattggagatattaaaacagcacctcagtatggaagctatggtacagcc
cctgttaacctgaacattaaaactggaggtagaatttatggacctgcaggtgggaagggc
aaaggagtggatttggatgccccaggcagtattaatggagttccgctagtagaggtggac
ttggattcctttgaggacaagccttggagaaaaccaggtgctgacctttcagattacttc
aattatggttttaatgaagaaacatggaaagcgtactgtgaaaaacagaagcgactacgg
atgggcctagaagcacttccagtctcttcaactacgaataaaattacagtgcagcagggc
agaactggaaactcggagaaagaaactgttatacagacgacaaagccagagttcacatcg
ccaacttcattatttaaatctaatgctgcacctcccagtagaaaactctcgggcacaatc
gatgtgattggacaaacaaccaccatcacacgggtagaaggcaggcggcggggtgctaat
gaaagcaacatccaggtagtcacagagcagtctccttcagaagtggataatttcatcaag
ccgccaccaccatttttccctcctggtgctcctcccactcatctccctccacctccgtta
tttccacctcccccaaatgtcagcactgcccctccgctaatccctcctccaggatctgga
ttgcagttatctttctccatgcaaaaaccatctagatatggaataccgattacagtgcca
ccaccaggtttccctcctcctcatggcggaccaccaccatcactgataccgaccatagag
agtggtcactcgtctgggtatgatggacggtcaacacctgctttcccatatggtagtgtg
tccttcccacacatgcctggttctggaggaccatggtccagtatggtagaaacatccaaa
ccttgggactattatcctcgacgagataaagaaagagaccgtgagagggatcgagaccgt
gaaagagaacgtgatagggagcgagaacgagagcgtccacgggaaagggagcgagaacga
gagagagagcgagatcgtgatcatagtcccagtgtgggagcctacaacagtgaagaagag
cgataccggtataaggagtatgcagaaagaccagagaggggctatgagcgccatagggag
aggattagcagagagaaggaagagcggcatagggaaaggaggcatcgagaaaaggaagag
tcaactcgccacaaatcatcaagaagcagcagcaggcgccgccatgacagtgaagaaggc
gacagtcacagaagacacaagcacaaaaaatccaaacgaagcaaggaaggaaaggatgcg
ggaagtgagcctgcccctgaacccgaaagtgttgagacatctgctgattag
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