Aquarana catesbeiana (American bullfrog): 141116453
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Entry
141116453 CDS
T11018
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
acat Aquarana catesbeiana (American bullfrog)
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acat03041
]
141116453 (PRPF39)
Spliceosome [BR:
acat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
141116453 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
MnmE_helical
TPR_19
TPR_MalT
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
141116453
NCBI-ProteinID:
XP_073464892
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All DBs
Position
LG13:34405080..34487783
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AA seq
677 aa
AA seq
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MQDSKSDHSLETKDSEDNVAASAETSAETTAEPSVETLDTSRDILEVTEMEQSPEQSPEQ
ESLPDEEAAAEPPPRTEPEPPLPPEFDKYWKAVEANPEEFTTWTYLLHYIEQENHIYAAR
RVFDMFLAHYPYCYGYWKKYADLERRNNNIMEADEVYRRGIQAITLSVDLWIHYLQFLKE
TLDPADPETCNTLRGTFEHAIMSAGLDFRSDKLWEMYIAYETEQGNLSGVTSIYSRLLSI
PTQLYAHHSQRFKEHIQGSLPRDFLTSEKFIEMRKELADMSQQCGVKIEYPTGLEEITDP
AKRTTEVENMRHRIIEVHQEIFNLNENEVHKRWTFEEGIKRPYFHVKALEKIQLNNWKEY
LEFEMENGSHERVVILFERCVIACALYEEFWIKYAKYMERHSAEGARHVYTRACTIHLRK
KPLAHLLWAAFEEQQGNIDEAKAILKTLEECVEGLAMVRLRRVNLERRHGNLMEAENLLT
DAMNNAKSNSELSFYAIKLSRHYSKIQKNIGKAKKVLCDAIQRDKENTKLHLNLIDLEFS
GDVKQNEANILSHFDKVIKSSMPIATRVVFSQRKVEFLEDFGSDISKLLTTYDEHQKLLR
EQENLKRKSENGLEQPDAKRLQTEDNAVVSAAPVAAAATATATGTVPSAYNYNNWYQYNY
QNAGAWNYGQYYHPPST
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcaggattcaaagtcagatcacagtcttgagactaaagattcagaagacaatgtagca
gcctcggcggagacctcagcggagaccacagcggagccctcagtggagaccttagatacc
agtagagacattttagaagtcacagaaatggagcagtctccggagcagtctccagaacag
gaatcattacctgatgaggaggcggcggcggaaccccctccaagaacagagccggagcca
ccactccccccagagtttgacaagtactggaaggctgtggaagccaatcctgaggagttt
acaacttggacttatctactgcattatattgaacaagagaatcacatctatgctgcccga
agagtgtttgatatgtttcttgctcattatccatactgttacggttactggaaaaagtat
gccgatctagagagacgcaataacaacatcatggaagctgatgaggtctaccggagagga
attcaggctatcactttaagtgttgacctttggatacattatcttcagttcttaaaagaa
actttagatcctgcagatcccgagacctgtaatactttaagagggacatttgagcatgca
atcatgtctgcaggcttagattttcgatctgacaagctgtgggagatgtatattgcctat
gagactgagcagggaaatctaagtggtgtcacatccatttacagtcgcctgcttagtata
cctacacaactctatgctcaccattcacagaggtttaaagaacacattcaaggtagtctt
cccagagatttccttacatctgaaaagtttatcgaaatgcgaaaagagctggctgatatg
agccagcaatgtggagtaaaaattgaatatccaactggcctggaagagataactgaccca
gcaaagcgcacaacagaagttgaaaacatgcgacatagaattattgaggtgcatcaagaa
atatttaacctcaatgaaaatgaagtccataagaggtggacctttgaagaaggaattaaa
cggccctacttccatgtgaaagctttggagaaaatccagctgaataactggaaagaatat
ttggaatttgagatggagaatgggtcacatgagcgtgtggtgatcttgtttgagagatgc
gtcattgcctgcgccctctatgaggagttttggatcaagtacgccaagtatatggaacgt
cacagtgccgaaggagcaagacacgtctacacccgggcctgcaccatccacctacggaag
aagcctttagctcatttactttgggctgcctttgaggagcaacaaggtaacattgatgaa
gccaaggctattttgaaaaccttagaagagtgtgtagaaggtctggcgatggttcggctg
aggcgagtcaaccttgaaaggagacatggaaacttaatggaagcagaaaatctgttgaca
gatgccatgaacaatgctaaatcgaacagtgaattatcgttttatgcaataaagctttcc
cgccattattccaaaattcagaagaatatcgggaaggcaaagaaagtgttatgtgatgcc
attcagagagataaagaaaataccaagttacacctcaatctgattgatttggagttcagt
ggagatgtgaaacaaaatgaagccaacatcctgtcccattttgacaaagtcattaagagc
tcaatgccaatagctacacgagttgtattttcacagaggaaagtggagttcttagaggac
tttggatcagatatcagcaaattgctgaccacctacgatgaacatcagaaacttttaagg
gaacaagaaaatctgaagaggaaatctgaaaatgggttagaacagccagatgctaagagg
ttgcaaactgaggataacgcagtggtgtctgctgctccagtggccgctgcagcaacagca
accgcaacaggaacagtgccatcagcatataactataacaattggtaccagtacaactac
cagaatgctggagcctggaactatgggcagtattaccatcctccttccacctga
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