Aquarana catesbeiana (American bullfrog): 141116677
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Entry
141116677 CDS
T11018
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
acat Aquarana catesbeiana (American bullfrog)
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acat04131
]
141116677
Membrane trafficking [BR:
acat04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
141116677
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
Ig_3
I-set
LRR_LRWD1
ig
LRR_9
V-set
LRR_Zer-1
Ig_2
Ig_6
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
141116677
NCBI-ProteinID:
XP_073465169
LinkDB
All DBs
Position
LG13:223107929..223116618
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AA seq
770 aa
AA seq
DB search
MLTITQGLEEGDPSRVLSIAWGPEEDDPSQVLVIARGPEEDDPSQVLTIAQGPEEDDPSQ
VLTIPQGPEEDDPSQVLTIPRGPEEDDPSQVLTIPRGPEEDDPSQVLTIPRGPEEDNPSQ
VLTIPRGPEKDDPSQMGTSKYTQRLNLTLKPVVLLVTIGILLRKSCICCPPTCDCPSHDN
ATLCKHRLLSLVPVEIPRSSHFLDLSYNRIRSVQHGTFSHLQDLQELDLSHNQLSRIEPG
AFSGLTKMRILLVHHNQLKLLSPGVFLGMPGLNWLDIRANQLVILLDQTFRGLQELRHLE
VSDNPLLFISPAAFLGISLLQRLGLEKTKLGSVPSLALASLPQLSELRLGGVTSTVLRDL
SFSDMPSLRVLDIDHWPSLANLGAHSLTSLNLTSLSLTNCNLRSVPEEALRSQVYLRRLD
LSQNPISFLTEGCFCDLKRLEELRLSGGRLSSIPSNAFHGLDHLRVLDLSDNPIRWVEEN
ALPPPGVLETLLLSGTILSCDCRLCWLLHHKIHFGGRPPVCSAPDSLKGMVIPDHSELLC
PEFFTCQPPKIIGQGPREFRVQEGDRLTISCQSQGVPEPSTLWVLPQVPWSMDTKSTHLD
GPDTELPQHALGSTEKVTESVQLVKDSQKWRTTNTSQPSKPVEQQEGRITILPEGSLQFL
PVQTLDTGDYLCLATNLAGNDSAWIHLEVSPFNSSTVYSPLPIVHSHLLAVITAGGILPF
ISSVTLCFIFIFLWSRGRGNIKHTANIDYIPRTSRASSSPEDNKFTMKLI
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccataacccagggccttgaagaaggtgacccctcccgagttttatccatagcc
tggggcccagaagaagatgacccttcccaggtgttggtcatagcccggggcccagaagaa
gatgacccctcccaggtgttgaccatagcccagggcccagaagaagatgacccctcccag
gtgttgaccataccccagggcccagaagaagatgacccctcccaggtgttgaccatacca
aggggcccagaagaagatgacccctcccaggtgttgaccataccccggggcccagaagaa
gatgacccctcccaggtgttgaccataccccggggcccagaagaagataacccctcccag
gtgttgaccataccccggggcccagaaaaagatgacccctcccagatggggacaagcaag
tatacccagagactgaacttaacattaaagccggtggtcctgttggtgactattgggatc
ttgctcagaaagtcatgcatctgctgtcctcctacatgcgactgcccatctcacgacaac
gccaccctgtgcaaacatcgtcttctcagcttggttccagtggagatcccccgctcttcc
catttcttggatctaagttataaccggatcaggtcagttcagcacgggaccttttcccac
ctgcaggatctccaggaactagacttgagccacaaccagctatcccgcatagaacctgga
gccttcagcggcctgacaaaaatgcgcatcctgttggtgcaccacaatcagctcaagctt
ctgtctccaggagtctttttgggaatgccaggacttaattggttagatatcagagcaaac
cagttggtcatcttgctggatcagactttccgtggcctgcaggagcttagacacctggag
gttagcgacaaccctctgttgttcatatctcccgcagccttcctggggatatcactactg
cagagactggggttggagaaaaccaaactgggcagtgtaccttctctggctctggcttcc
ctgccccagctttctgaactaagactgggtggagtgaccagcacagttctacgtgatctc
tcgttttcagacatgccatccttgagagtactagatatagaccattggccttctcttgca
aaccttggagcacacagtctgactagtctcaatcttacctccctatcactaacaaactgc
aacctaaggtcagtcccagaggaagcactgaggtctcaggtctacctacgtaggttagac
ctctcgcaaaatcccatttctttccttactgaagggtgtttttgtgatctgaaaaggttg
gaggagttacggttgtctggtggaagacttagttctataccttccaatgcttttcatggc
ctggaccacctccgtgtgttagatctttcagacaatccgattcgatgggtagaagaaaat
gccctccctccccctggtgtcctggagactttgttactttctggaaccattttgtcgtgc
gactgccgtctttgttggctcctgcaccataaaatccattttggaggaaggccaccagtg
tgctcagctcctgactcgttgaaggggatggttatcccagaccactcagagctgctatgc
ccagagttttttacctgccaaccacccaagataataggacaaggtccacgtgagttcagg
gtgcaggagggcgacaggctgactatcagctgtcagagtcagggcgtacctgaaccctct
acgctgtgggtgctaccacaagttccatggtccatggacacaaaatccacacaccttgat
ggcccagatacagaactccctcaacatgcactaggttctacagagaaggtaacagagtca
gtgcagttagtaaaagattctcaaaaatggagaacaaccaatacatcacaaccatcaaaa
ccggtggagcaacaagagggccgaatcaccatcctaccagaaggttccctccagtttctt
ccagtgcaaaccttagacacgggggattacctctgcctggctaccaaccttgcagggaat
gactctgcctggattcacctggaggtctcaccattcaacagcagcacagtctattctccc
ctccccattgtccacagtcatcttctggccgttatcacggctgggggaatccttcccttc
atcagttctgtgacgctttgcttcatcttcatcttcctctggagccgtggacgcggaaat
atcaaacacacagctaacatagattatattcccaggacttctcgggcaagttcatcaccg
gaggacaataaattcaccatgaaactcatctga
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