Aquarana catesbeiana (American bullfrog): 141116830
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Entry
141116830 CDS
T11018
Symbol
DHX15
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141116830 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acat03041
]
141116830 (DHX15)
03009 Ribosome biogenesis [BR:
acat03009
]
141116830 (DHX15)
Enzymes [BR:
acat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
141116830 (DHX15)
Spliceosome [BR:
acat03041
]
Complex A
U2 snRNP components
U2 related factors
141116830 (DHX15)
Complex B
141116830 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
141116830 (DHX15)
Ribosome biogenesis [BR:
acat03009
]
Eukaryotic type
90S particles
Helicases
141116830 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Cas3-like_C_2
Flavi_DEAD
Atrophin-1
AAA_29
AAA_25
DUF3915
Motif
Other DBs
NCBI-GeneID:
141116830
NCBI-ProteinID:
XP_073465387
LinkDB
All DBs
Position
LG01:857960855..858018534
Genome browser
AA seq
759 aa
AA seq
DB search
MSKRHRLDLGDDYASSKKRDGKDRDRERDDRSKDRDRDRDRDRERDRDKDKDSRSALNTP
FIAAGGVPTVKPAALPQGINPFTNLPHTPRYYEILKKRLQLPVWEYKERFTDILTRNQSF
VLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQE
VGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVVILDEAHERTLATDILMGVL
KEVVRQRNDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYLEAAI
RTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQ
QQRIFEPPPPKKASGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESL
LVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKK
LGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI
ASCEYNCSNEILSITAMLSVPQCFIRPTEVKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ
NHESSQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYVNIRKALVTG
YFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPE
WLVKIAVQYYDMGNFPQCEAKRQLERIIAKLQTKEYSQY
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgccaccggttagatctcggagacgactatgcctcgagcaagaagagagat
gggaaggacagagatcgagagagagatgacagatcaaaggatcgagatcgggacagggat
agagatcgtgaaagggatagggacaaggataaggattcacgtagcgcattaaatacccca
tttatagcagccggtggggtcccaactgtaaagccagcagcacttcctcaaggcatcaat
ccattcaccaacctgccccacacaccgcggtactatgagatcttaaaaaaacgtcttcag
ttgccagtctgggagtacaaggagcgttttacagatattcttaccagaaaccagagcttt
gttttagttggagagactggttctgggaaaactacacagattccccagtggtgtgttgat
tacatgcgatctttgcccgggcccaagagaggtgttgcatgtacccagccgagaagagta
gctgcaatgagtgtggcacagagagtcgctgatgaaatggatgtcatgctgggccaggaa
gttggttattctattcgatttgaagactgcagtagtgcaaaaactatcctgaagtacatg
actgatggtatgttgcttcgagaggctatgaatgacccattgttggaaagatatggtgta
gttattctggacgaagctcacgagaggacgttggccactgatattttaatgggcgtgtta
aaagaggttgtacggcagaggaatgatttaaaggttatagtcatgagtgccacacttgat
gcaggcaaattccaagtgtattttgatagctgccctctcctgactattcctggccgcaca
catcctgtagaaatcttctatactccagagccagagagagactacctggaagctgctatc
cgcacagtaatccagattcacatgtgtgaagaggaagaaggagatctacttctgtttctc
acaggccaagaggagattgatgaagcttgcaaaaggattaagcgtgagatcgatgacttg
ggtcctgaagttggcgacataaagatcatcccattatattcaaccctcccaccccaacag
cagcagagaatatttgagccccctccaccaaagaaagcaagtggtgcaataggaaggaaa
gttgttgtttccaccaatattgctgagacctcattgactattgatggtgtcgtatttgtg
atcgatcctgggtttgctaagcaaaaggtgtacaaccctcgcattcgagtagagtccctt
ctggtgaccgctatcagcaaggcttcagcacaacaaagggcaggccgtgctggtcgtact
aggccaggaaagtgctttagactttacacagaaaaagcttacaaaactgaaatgcaggac
aacacataccctgaaattttgaggtctaatctgggttcagtggtgttgcagttgaaaaag
cttggtattgatgacttggtccactttgactttatggatcctccagcccctgaaacttta
atgcgagctctggagctgctgaattacctggctgccttaaacgatgacggtgacctgact
gaactgggatctatgatggcggagtttcccttggaccctcagcttgccaagatggttatt
gccagttgtgaatacaactgttctaatgagatcctatccataactgctatgttgtcagtc
ccacagtgttttattcgacccacggaagtcaagaaagctgcagatgaagccaagatgagg
tttgcccacatagatggtgatcatctgacactgctgaatgtctaccacgctttcaaacaa
aatcatgagtcgtctcagtggtgttatgacaacttcattaactacaggtccctgatgtct
gcagacaatgtacggcagcagctgtcacgaatcatggacagatttaacttgccgcggcga
agtacagacttcacaagccgggattattacgttaatattagaaaagctttggttaccggc
tattttatgcaggtggcgcatttggaacggactggccattatctgaccgtgaaagacaac
caagtcgtacagttacatccctcaacagttctggaccacaagcctgagtgggtcttgtat
aacgaatttgtgcttacaacaaagaactacatccgcacatgcacagacataaagccagaa
tggttggtgaaaattgctgtccagtactatgatatgggcaatttccctcagtgtgaagca
aagaggcagctggaacggatcattgccaaacttcaaaccaaggagtactcccaatactga
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integrated database retrieval system
