Aquarana catesbeiana (American bullfrog): 141116921
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Entry
141116921 CDS
T11018
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
141116921 (SLIT2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
acat00536
]
141116921 (SLIT2)
Glycosaminoglycan binding proteins [BR:
acat00536
]
Heparan sulfate / Heparin
Axon guidance molecules
141116921 (SLIT2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRRCT
LRR_9
LRR_1
EGF_TEN
LRR_14
hEGF
EGF_DL_JAG
EGF_TGFA-like
JAG1-like_EGF2
EGF_Teneurin
EGF_C8A_B_C6
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
141116921
NCBI-ProteinID:
XP_073465521
LinkDB
All DBs
Position
LG01:complement(863351409..863760328)
Genome browser
AA seq
1564 aa
AA seq
DB search
MFVGFVKKKMCGVGFWKLSISVGLVLVILSEVAPQPCPTQCTCSGTTVDCHGLSLRSVPR
NIPRNTERLDLNGNNLTRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELDRLRLN
RNNLQVFPELLFLTTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDFNQISCIEDGSF
RALRDLEVLTLNNNNITRLSVASFNHMPKLRIFRLHSNNLYCDCNLAWLSDWLRQRPRVG
LYTQCMGPTHLRGHNVAEVQKREFICNGQQSFTISSCSVLHCPAACTCSNNIVDCRGKGL
TEIPTNLPETITEMRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLN
SLVLYGNKITELPQSVFEGLFSLQLLLLNANKINCLRVGAFQDLHNLNLLSLYDNKLQTI
AKGTFAPLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQI
KSKKFRCSAKEQYFIPGIHHLGCTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLT
KIPDHIPQYTAELRLNNNEFTVIEATGIFKKLPQLRKINLSNNKITDIEEGAFEGANGVN
ELILTSNRIENVHHKIFKGLDGLKSLMLRSNHISCVNNDSFTGLSSVRLLSLYDNQIVTV
APGAFDTLHSLSTLNLLGNPFNCNCHLAWLGNWLRKKRIVTGNPRCQKPYFLKEIPIQDV
AIQDFTCDEGNDDNTCSPLARCPAECTCLDTVVRCSNKALKALPKGIPKDVTELYLDGNQ
FNLVPKELSNYRHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPLRAFSGLN
SLRLLSLHGNDVSSVPQGAFNDLSSLSHLAIGANPLHCDCNLQWLSEWVKSEYKEPGIAR
CAGPGDLAEKLLLTTPSKKFTCHEIPGPCGFLVPGPVDVNILAKCNPCLSNPCKNEGTCN
NDPVDFYRCTCPYGFKGQDCDVPIHACISNPCKHGGTCHLKEGDKDGYWCTCADGFEGEN
CEVNIDDCEDNDCENNSTCVDGINNYTCLCPPEYTAANLNEVEKGELCEEKLDFCSQEVN
PCLHDSKCILIPKGYKCDCTPGYVGEHCETDYDDCQNNKCRNGARCTDAVNGYTCVCSDG
FSGLFCEYPPPMVLPRTSPCDNFECLNGAQCIVKGTDPSCQCVSGYQGSKCEKLTSINFV
NKESYLQMSSMRIRAQTNISVQVATDEDSGILLYKGDKDHIAVELYRGRVRVSYDTGSYP
ASAIYSVETINDGHFHTVELVSLDQTLSLIVDGGNPKTITNLSKQSSLGFDSPLYIGGMP
MKNNVAVLRQAPGQNGTSFQGCIRNLHVNNDLQDFKKFNLPTGIVHGCEPCHKKLCVHGT
CLATSQSGFTCECEGGWSGPLCDQQSNDPCLGNKCVHGTCLPINAFSYSCKCSSGYGGVL
CDEIEEQFNPCQSVKCKHGKCRLSGLGKAYCECNSGYTGDSCDKEISCRGERIRDYYQKQ
QGYAACQTTEKVSRLECRGGCSNGQCCGPLRSKRRKYVFECTDGSSFVDEVEKVIKCGCT
KCPS
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgggatttgtgaagaagaaaatgtgtggcgttggtttctggaagctttccatc
tcggtggggttagtgttggtgatcttgagcgaggtggcacctcaaccgtgcccgactcag
tgcacttgtagtgggaccacggtggactgccatgggttatctttgcgtagcgtgccacgc
aacattccccggaacacggaaaggctagatttgaatggtaacaatctcacaagaataacc
aagacagactttgctggtctgcgacatcttcgtgttttgcagcttatggagaacaagatt
agcaccattgaaaggggagcgtttcaagatctgaaagagctggatagattacgtttgaat
cgaaataatcttcaggtgtttccggaattgctttttctgacgactccgaagctctacaga
ctagacctcagtgaaaaccagatccaggccatcccaagaaaggcgttccgtggagcggta
gatattaaaaatctgcaactggattttaaccagatcagctgcattgaagatggttctttc
cgagctctgcgcgacctggaagtgcttaccctcaacaataacaatatcactcgactttca
gtggcaagcttcaaccacatgccaaaactgcgaatttttcgacttcattccaacaactta
tactgtgactgtaatctggcctggttatcagactggctgcggcagaggccccgcgttggc
ctgtacactcaatgtatgggacctacccacctgagaggacacaacgtggctgaagttcag
aaacgggaattcatatgtaatggtcagcagtccttcacgatatcttcttgcagtgtcctg
cactgcccggctgcctgcacctgcagtaataacattgtggattgtcgaggaaaaggattg
actgagatccctaccaacctgcctgagaccatcaccgaaatgagattagagcaaaactca
atcaaggtcatacctccaggggctttctcaccgtataaaaaactacgaagaattgattta
agcaataaccagatatcggaaattgctccagatgcatttcaaggcctgcgttccctcaac
tccttggttctctatggaaacaaaatcacagagctccctcagagtgtgtttgaaggcctg
ttttcattacagctactattgctcaatgccaacaagataaattgtttgcgggtaggtgct
ttccaggatctccacaacctgaaccttctgtctttgtatgacaacaaacttcaaaccatt
gccaagggcacattcgctcctcttcgtgccattcaaacactgcatttggctcagaaccca
tttatctgtgactgccatctgaagtggctggcggattatcttcatacaaaccctattgag
accagtggtgcccgctgcaccagcccccgccgactggcaaacaaaagaatcgggcagatc
aaaagcaagaaattccgctgttcagctaaagagcaatatttcattccaggcatccatcac
ttgggttgtacggaagactacaggtcaaaactaagtggagattgctttgctgacctggca
tgtccagagaagtgtcgttgtgaaggaaccactgtagactgttcaaatcagaagctcact
aaaatcccagatcacattccacagtacacagctgagctgcgtctcaataataatgagttt
acagttatagaagcaactggaatctttaagaagctcccacagctgcggaaaataaaccta
agcaataacaagattactgatattgaagaaggggcctttgagggagccaatggagtaaat
gagctcatcctgacaagcaaccgaatagagaatgttcaccataaaatttttaaaggcctg
gatggactaaaatctctgatgctgagaagtaatcacattagctgtgtgaataatgacagt
tttactggcctgagctctgtgcgattactttctctgtatgacaatcagattgtcacagtt
gcccctggagcattcgacacgttgcattccctgtctacactgaaccttctgggaaaccca
tttaactgtaactgtcacctggcctggctgggaaactggcttaggaagaaacgtattgtg
actggaaatccaagatgccaaaaaccatacttcctgaaggaaattcccatacaagatgtt
gcaatacaggactttacctgtgatgagggcaatgatgacaacacttgctcaccacttgct
cgttgcccagcagaatgtacctgcttagatacagtggttcgctgcagtaacaaagcacta
aaagcattgcctaagggtattcctaaggatgtcacagagctgtacctggatggaaatcag
tttaaccttgtcccgaaggagctatccaattataggcacttgacacttattgacctgagc
aataacagaatcagcactctgtccaatcaaagcttcagcaatatgacacagcttctcacc
ttgattctaagttacaatcgactaagatgcattcctctacgggctttcagtggacttaat
tcccttagactcctatccctccatggcaatgatgtatcctctgtaccacaaggagcattc
aatgacctctcctccctgtcacacttggccatcggagcaaaccctctgcactgcgactgt
aacttgcaatggttgtccgaatgggtgaagtctgaatacaaggaacctggtattgctagg
tgtgctggacctggggacctggcagaaaaactgcttcttactactccatccaaaaagttc
acatgtcatgaaattccagggccttgtggttttctggttccaggaccagtggatgtcaac
attcttgccaaatgtaacccatgtttatcaaatccctgcaaaaatgagggcacctgcaac
aatgacccagttgacttctatcgctgtacatgtccctatggctttaagggtcaagactgt
gatgtacctatccatgcttgtatcagcaacccatgtaaacatggaggaacttgccacttg
aaggaaggagataaagatggatattggtgtacctgtgcagatggctttgaaggtgaaaac
tgcgaggtgaacattgacgactgtgaagataatgactgcgagaataattccacttgtgtg
gatggaatcaacaactacacctgcctctgtccaccagaatacacagctgctaatctgaat
gaggtggaaaaaggagaactatgtgaagagaagctggatttctgctcccaggaagtaaac
ccatgtctgcacgactccaaatgcatcttgataccaaagggatacaaatgtgactgcact
ccaggatatgttggtgagcactgtgaaactgactatgatgactgccaaaacaacaagtgt
cggaatggtgcgcggtgtacggatgccgttaacggctatacctgtgtgtgttcagatggc
ttcagtggactcttttgtgagtacccaccacccatggtcctacctcgtacaagtccctgt
gataattttgagtgtctgaatggagcacaatgcattgtgaaaggcactgacccctcgtgt
cagtgtgtgtcgggatatcaagggagcaagtgtgagaaactaacaagcatcaactttgta
aacaaggaatcttacctgcaaatgtcatcgatgaggatccgcgcgcagaccaatatctca
gtgcaggtggctacagatgaagacagcggcatcttgctctacaagggtgacaaggaccac
atagcagtggagctgtacagaggaagagtacgtgttagctatgacactggaagctaccca
gcatctgccatttacagcgttgagacaataaatgatggccactttcacaccgtggaactt
gtaagcctggatcaaacgctgtcactgatagtggatggaggaaaccctaagaccatcact
aatttgtcaaaacaatcctctctcggcttcgactctccgctatatataggaggtatgcct
atgaaaaacaacgttgctgttttgcggcaagctcctggacaaaatggaaccagctttcaa
ggttgcatccggaacctgcatgtaaacaacgatctacaagactttaagaagtttaatctg
ccgacgggaattgttcatggatgtgagccatgccacaagaagttgtgcgtgcatggaact
tgtctggccacaagtcagtctgggttcacttgcgagtgtgaaggaggctggtcaggacct
ctctgtgatcaacagtccaacgacccttgtctgggaaataaatgtgtacatggcacctgc
ctgccaatcaatgcattttcctacagctgtaaatgttcctcgggctatggtggagttctg
tgtgatgaaattgaagaacagtttaacccttgccaatctgttaaatgtaaacatggcaaa
tgccgactctcaggccttgggaaagcctactgtgagtgcaacagtggctataccggagac
agctgtgataaagaaatctcttgccgaggggaacggatcagagattattaccaaaaacag
caaggttatgcagcttgccagacgaccgagaaggtatcgagactagaatgcagaggaggc
tgctccaatggtcagtgctgcggacctttgagaagcaagagacggaaatatgtttttgag
tgcaccgacggttcctcatttgtggacgaagtcgagaaagtcataaagtgtggctgtaca
aagtgcccctcctaa
DBGET
integrated database retrieval system
