Aquarana catesbeiana (American bullfrog): 141116963
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Entry
141116963 CDS
T11018
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04140
Autophagy - animal
acat04142
Lysosome biogenesis
acat04145
Phagocytosis
acat04148
Efferocytosis
acat05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
141116963 (VPS39)
04142 Lysosome biogenesis
141116963 (VPS39)
04140 Autophagy - animal
141116963 (VPS39)
04148 Efferocytosis
141116963 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
141116963 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acat04131
]
141116963 (VPS39)
Membrane trafficking [BR:
acat04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
141116963 (VPS39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
141116963
NCBI-ProteinID:
XP_073465592
LinkDB
All DBs
AA seq
876 aa
AA seq
DB search
MHDAFEPVLILEKLPLQIECLAAWGEWLLVGTKQGHLLLYRVKKEQGCNQFEVTLEKSNK
NFAKKIQQIHVVPQFKILVSLLDNNACVHDLLTFQLMTTISKAKGASLLSCDLQVTKSGE
ETLKMCVAVRRKLQLYYWKDRSFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVD
GKGSIKELFPTGKQLEPLAVPLGDGKVAVGQDDLTVVLNEEGTCTPKCALNWTDIPMAME
YQPPYIIAVLPRYVEVRTFEPRLLVQSIELQRPRFISSAGPNMVYVASNHFVWRLVPVSI
ATQIQQLLQDKQFELALQLAKMKDDANGEKRQQIHHIQNLYAFNLFCQKRFDDSMQVFAK
LGTDPTHVIGMYPDLLPSDYKKQLQYPNPVPLLSGAELEKANLALIDYLTQKRSHLVKKL
NDTDHHSTTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLEHNHCHVEE
SEHVLKKAHKYSELIILYEKKGLHEKALAVLVDQSKKANSPLKGHERTVQYLQRLGSEKL
SLIFEYCVWVLRDYPEDGLKIFTEDLPEVESLPRNDVLEFLLEHFRHLAIPYLEHIILVW
EDKGPEFHNCVIKLYCERVQTLMQAIGPDFNEEVMRTIPAGSEDGDLGEYRGKLLNFLEI
SNCYQPERLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTSMAEQYCHKHYDRA
KEGNKDVYLSLIRMYLSPPDVHCLGPIKIKLEEPKANIDAALAVLEQHHAKLNTTKAIDL
LPANTQIRQIQIFLEKVLEENAERRRFNQILKNLLHAEFLRVQEERISHQQVKCVITEEK
ICSVCKKKIGNSAFARYPSGTVVHYFCAKDTSSVDT
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgcctttgagccggtcctgatcctggagaagctgccgctgcagatagagtgt
ctggcagcctggggtgagtggctacttgttggaactaagcagggtcatctgctgctttac
agagtcaaaaaagaacaaggttgtaaccagtttgaagtaactttggagaaatcaaacaag
aactttgctaagaaaattcagcagattcatgttgttcctcagtttaagatcctggtcagc
ttgctcgataacaatgcctgtgttcatgacttgctgaccttccagcttatgaccactatt
tcaaaagctaagggtgcttcactactatcatgtgacctccaggtcactaaatctggagaa
gagactctgaagatgtgtgtggctgtccgtagaaaattgcagctatattactggaaggac
agatcgttccatgaacttcagggagacttcagtgttcctgatgttcccaaatccatggca
tggtgtgaaaactccatctgtgtggggttcaagagggattattatttaatcagggtagat
ggtaaaggctctattaaggagttgttcccaacaggcaagcagcttgaaccattggcagta
cctctgggtgatggaaaagttgcagtgggtcaggatgatctgacagtggtgctaaatgag
gagggaacttgcaccccaaagtgtgccttgaattggacagatatcccaatggcaatggag
tatcagcctccatatattattgctgtcttgccaaggtacgtggaagtacggacatttgaa
ccgcgtctgctagtgcagagtattgaacttcagcgaccccgcttcatttcatctgcagga
ccaaacatggtatatgttgctagcaatcattttgtctggagattggtccctgtttcaatt
gctacgcagatacagcagctactccaggataaacagtttgagcttgcactgcagctagca
aagatgaaagatgatgcaaacggtgagaagcggcagcagatccatcacattcagaacctc
tatgccttcaacctattttgccagaagcgctttgatgattctatgcaagtgtttgccaaa
cttggcactgatcctacgcatgttattgggatgtatccagacctgctaccttctgattac
aaaaaacagctccagtaccccaatcctgtgcccttactgtcaggagcagaactagagaaa
gccaatctggctctcatagattacttaacccagaaaagaagtcacctggtaaagaagctg
aatgatactgatcaccactctaccacctctccacttatggaagggactccaaccatcaag
tcgaagaagaaacttctccagattatagacaccactttgctcaaatgttacttgcataca
aatgtggctttggtggctcctcttctccggttagagcataatcattgccatgtggaagag
agtgaacatgtcctgaaaaaggcacacaagtacagtgagctgatcatcctttatgagaag
aaagggctacatgaaaaagctcttgcagttcttgttgaccagtcaaagaaagcaaactct
ccattgaagggccatgaaagaacagtccagtacctgcagcggttgggatcagaaaaactt
tctttgatatttgaatactgtgtatgggtgctgagggattatcctgaagatggtttaaag
atcttcacagaagacctcccagaagttgaaagtcttccccgtaacgatgtgttggaattt
cttttggaacacttcagacatctagcaattccatacttggaacatatcatcctggtatgg
gaagataaaggccctgaatttcacaactgtgtgatcaagctttattgtgagagagtgcag
accttgatgcaagcaataggccctgactttaatgaagaagtcatgcgtacaattcctgca
ggctcagaggatggggacctgggagaataccgaggaaaactgctaaattttctggaaatc
tcaaactgttatcagcctgaaaggctgatcagtgacttcccgtttgatggattgttagaa
gaacgtgctctccttttgggccgaatgggcaaacacgagcaggctttgttcatatatgtg
cacattttgaaggacaccagtatggcggagcagtattgccataaacactatgaccgtgcc
aaagaaggcaataaggatgtgtatttgtcccttatcaggatgtacctctctccacctgat
gttcattgtcttggtcccatcaaaataaagctggaagaaccaaaggcaaatattgatgct
gccctggctgttttggagcagcatcatgcaaaactgaacacaactaaagccattgacttg
ttaccagccaacacacaaataagacagatccagatcttccttgaaaaagtactggaagag
aatgcagagaggaggcgcttcaaccaaatcctcaagaatctcctacatgccgagttctta
cgagtacaagaggagagaatttcccatcaacaggtgaagtgtgtaatcacagaggagaag
atatgtagtgtatgtaagaaaaaaattggaaacagtgcttttgcccgctatccaagtggc
actgttgtccactatttctgtgcaaaggataccagctctgttgacacctga
DBGET
integrated database retrieval system
