Aquarana catesbeiana (American bullfrog): 141117025
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Entry
141117025 CDS
T11018
Symbol
SEMA6C
Name
(RefSeq) semaphorin-6C isoform X1
KO
K06842
semaphorin 6
Organism
acat Aquarana catesbeiana (American bullfrog)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
141117025
NCBI-ProteinID:
XP_073465696
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Position
LG13:237146910..237436499
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AA seq
1045 aa
AA seq
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MSHVPFAVVLLLIRCLLSSSLVFPKDLSPIRTIDSGSTRSYPLFRGLTSDENAVNLGLDF
QKMIRLNQTLFVAAREYVYAIDLRRTKDAISSDKYITWKTQNMDNCAVRGKPLDECYNYI
KVLVIKNDQTLIACGTNSFNPTCRNYKIQTLEQEGEEFNGQARCPFDAKQTNVALFADGN
LYSATVADFQASDAVIYRSLGEKSPVLRTIKYDSKWLREPHFIHAVEYGNYVYFFYREIS
MEYTTLGKVTFSRVARVCKNDMGGSPRVLEKYWTSFLKARLNCSVPGDSFFYFDVLQSMS
DILTINNRPAVIGVFSTQANSITGSGVCAFYMDDIEKVFNGKFKEQKTTESAWTPIPEDK
VPVPRPGCCAGFGNAASYKASSEFPDETLSFIKSYPLLDEAVPSITETPWFTKTTSRYKL
TQIAADTSAGPYGNYTVLFLGSEDGKVLKVLTGTTENSTVETALLEEINVYSQDRCGVRA
EDGKILGLQVDRENHALFVAFSSCIIRVPLSRCETYGTCRRSCLTSRDPYCVWLKSGTCA
NFRGDPRAGVEQEVEQTKHRGNCQDLVTASGSLDGDGDSAYGKVPLSGDITMSNVASLGD
VTLPGGRGYPPPGVTSDGYYHLSAWHTLRTQGVRQEAAGNEATKTVHFTFLIGCVFVAFV
VGSIFSGLFVSCYCNHMFQKNKHIGKDPESNLQRPLSLRSLAKMNGLLDTQSKEGMEATS
PKLYTTLLHGDKEQQAETTKTGSKDHPELSGLPTPESTPELPMKNLKAFKNQWERNQNCN
NAKEIQSKSPVFHFPVSNSQVFQFPSTVALPSSMHGYDQPLSSYADDKKIPNSERALIRH
SQCYLPKGVEVTTLDELLKHLPEGGGSPRKMSGMMAISPQAVSPHSPMSFMNRVQPQIPE
TESAPYYSSSTLPRDSLPRRLDIPPDVNPQSCLEKQSRHPSQRHSLSSGHKLMNIGPGPL
VSRQHSLGQGTRQHPPPLLTRMHSTGTPVPMDSHNIYLSRQHSYTEQTPMQRGMVKRTLS
LRPEVSSAPVFLPSSPIKDANQFQY
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacgtgccttttgctgtggttcttctcctcatcagatgtctactgtcctcttca
cttgtgttcccgaaggacttaagtcctatcagaaccattgattcgggaagcaccagatcc
tacccattgtttcgaggactgaccagcgatgaaaacgcagtaaatctcggcctggacttc
cagaagatgatcaggctcaaccaaacgttgtttgttgctgcaagggaatatgtgtacgca
atcgatctgaggaggactaaagatgcaatctcaagcgacaagtatatcacatggaagacg
caaaatatggacaactgtgccgtgcgaggaaaaccactggacgaatgctacaattatatt
aaagttttggtaatcaagaatgaccaaactctcattgcctgcggcaccaattccttcaac
ccaacatgccgaaactacaagatccaaaccttggagcaggaaggcgaagagtttaacggc
caagcgcggtgcccttttgacgccaagcaaaccaacgtggccctttttgcagatgggaat
ttgtattcagccacggtggccgacttccaagccagcgacgccgtcatctaccgaagcctg
ggggagaagagccccgttctccgcaccatcaaatacgactccaaatggcttcgagaaccc
cattttatccatgcggtggagtatggaaactacgtgtatttcttctatcgggagatctcg
atggaatataccacactgggcaaggtgaccttctctcgggtggccagagtatgcaaaaac
gacatgggtggctctcctcgggtcttggagaagtactggacctcctttctgaaagctcga
ctgaactgctctgtcccaggagactccttcttctactttgacgtcctccagtccatgagc
gatatcctcaccatcaacaaccgtccagcagtcattggagtattcagcacccaggctaac
agcatcactggctcaggagtctgtgccttctacatggacgacatcgagaaggtcttcaat
ggaaagtttaaagagcaaaagaccactgagtcggcttggaccccgatcccagaagacaag
gttcctgtgcccaggcctggttgttgtgcagggtttggcaacgccgcatcctataaggcc
tccagtgagttcccagatgagaccctctccttcatcaaatcctaccctctcctggacgag
gctgtgccttctataacagagacaccatggtttactaagacaactagcaggtacaaattg
acccaaattgctgctgacacgtcggccggcccctatggaaattacacggtcttgttcctt
ggctcagaggacgggaaggtgttgaaggtcttgactggcactacggagaactccaccgta
gagacggctctcttagaggagattaatgtttacagccaagataggtgtggggtgagggca
gaggatgggaagatattggggctgcaggtggaccgtgaaaaccatgccttgttcgtcgca
ttctccagctgcatcattcgggttcctctaagtcgctgcgaaacctatggaacctgtaga
cggagctgcctgacctccagagacccgtactgcgtgtggttgaaatcggggacctgcgcc
aacttccggggcgacccaagggccggggttgagcaggaagttgaacaaacaaaacatcgg
ggcaactgtcaagatcttgtcactgcatcggggagtcttgatggtgatggagactccgct
tacgggaaagtcccgctcagtggtgacatcaccatgtccaatgttgcctcccttggggat
gtgactctcccaggcgggcgcggctaccccccgccaggtgtgacatcagacggttactac
cacctttctgcctggcacactcttagaacccagggtgtgcggcaggaggctgcaggcaat
gaggccaccaagacagtccatttcacgttcctcatcgggtgtgtcttcgtagcctttgtg
gtaggatccatcttttcaggcctttttgtgtcctgttactgtaaccacatgtttcagaaa
aacaagcatattgggaaggacccagaatccaatctacaacggcctctatcattgagaagc
ctggcaaagatgaatggacttttagacacccagtcaaaggaaggaatggaagcaacctca
ccaaagctctacaccaccctactgcatggagacaaagagcagcaagcagaaacaaccaaa
actggatcaaaagaccatcctgaactatccggtctccccactccagaatccactccagaa
ttgccaatgaagaatctcaaagccttcaagaaccaatgggaaagaaatcagaattgtaat
aatgccaaagaaatccaaagcaaaagtccggttttccattttcctgtctcaaattcccag
gtctttcagtttcctagcacagttgcccttccgagcagcatgcatgggtatgatcagcct
ctatctagctatgcagatgataagaagatacccaactctgaaagggctctgatccgtcat
tcacagtgctatctccccaaaggggttgaagtgacaactctagatgaacttctaaaacat
cttccagaaggtggtggctcaccgagaaaaatgtctggcatgatggctattagccctcaa
gctgtcagccctcattcacccatgtcattcatgaacagggtccagccccaaattcctgaa
actgaaagcgctccttattacagctcctcaactcttccgagagacagtctgcccagaaga
ttggacatcccaccagatgttaatcctcaatcctgtctggagaaacagtcaaggcacccc
tctcaaagacattctctatcctctgggcacaaactcatgaacataggtccaggaccgctg
gtttccaggcaacatagcctgggtcaaggaaccagacaacatcctccaccacttctcaca
aggatgcactctacaggcaccccagtgccaatggatagccacaacatctatctctcccgc
cagcatagctacacagagcaaactccaatgcagaggggtatggtgaaaaggaccttgtcc
ttgagaccagaagtatcatctgcccctgtgtttctcccatcatcccccataaaggatgca
aaccagtttcagtattaa
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