Aquarana catesbeiana (American bullfrog): 141117075
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Entry
141117075 CDS
T11018
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141117075 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acat03019
]
141117075 (CPSF2)
Messenger RNA biogenesis [BR:
acat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
141117075 (CPSF2)
U7-dependent histone pre-mRNA processing factors
141117075 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
ODP
Motif
Other DBs
NCBI-GeneID:
141117075
NCBI-ProteinID:
XP_073465782
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Position
LG13:19109255..19149661
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AA seq
783 aa
AA seq
DB search
MTSIIKLTTLSGAQEESALCYLLQVDEFRFLLDCGWDESFSMEIIEAIKKYVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFNLYTLDDVD
SAFDKIQQLKFSQIVHLKGKGHGLSIAPLPAGHMLGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMISRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLTLCHGFADLARVPSPKVVLASQPDLECGFSRELFIQWCQDPKNSIILTYRTS
PGTLSRFLIDNPTEKIIDIELRKRVKLEGKELEEYLEKERLKKEAAKKLEQSKEADIDSS
DDSDVEEDIDQPMVHKAKHDLMMKNEGSRKGFFFKQAKKSYPMFPTTEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGEEPMDQDLSDVPTKCISATEPMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLVIVHGPPDASQDLAEACRAFGGKDIKVYTPKLHETVDAT
SETHIYQVRLKDSLVSSLKFCKAKDTELAWIDGMLDMRVSKVDTGVILEEGELKEEGEDS
EMQVDVTPVDASTIAQQKVIKSLFGDDDKEFTEESEVIPTLEPLTSTEVPGHQSVFMNEP
RLSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCICEDFYKIRELLYSQY
AIV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgacctccatcatcaagctgacgacgctctctggagcgcaggaggagtcggccctctgc
tacttgctgcaggtggatgaatttcgcttcctacttgactgcggctgggatgaaagtttt
tctatggagatcattgaagccatcaaaaagtatgtacatcagatagatgctgtgcttctt
tctcatccagatccgctacacctcggagcactgccctacgccgtgggcaagctgggatta
aactgtgctatatatgctacgatccctgtatataagatggggcagatgtttatgtatgac
ttgtaccagtctcggcacaacacagaagattttaatttgtacaccctggatgatgtggat
tcagcgtttgataagatacagcagctgaaattctcacagatcgtccatttgaaaggaaaa
ggtcacggtttgtctatcgccccgttgccagctggtcacatgcttggaggcaccatatgg
aagattgtaaaggacggggaggaggagatagtatacgctgtagatttcaaccacaaaagg
gagatacatttaaatggctgctccctggaaatgattagccgtccatctcttctcatcaca
gacagttttaatgctacttatgtccagccgagaagaaagcagagagatgaacaactacta
acaaatgtccttgagaccctccgtggtgacggcaatgtgttaatagcggtggacacggct
ggaagggtgctggaacttgcacagttgctcgatcagatttggaggaccaaagacgctgga
ctcggtgtatactccctggcacttctcaataatgtgagctacaatgtggtggagttttcc
aagtctcaggtggagtggatgagcgataagctgatgagatgttttgaagacaagaggaac
aatccctttcagttccgacacctcaccttgtgtcacggcttcgcagacctcgctcgtgtc
cccagtccgaaagtggtgctggccagccagcctgacctggaatgtggtttctccagagag
ctgttcatccagtggtgtcaggatccaaaaaattccattattctcacctaccgcacctct
cctgggaccctcagccggtttctgatcgataacccaaccgagaagatcatagatattgag
cttagaaaacgcgtaaaactggaagggaaggagctggaggaatatttagagaaagagaga
ctgaagaaagaagctgccaagaagcttgaacagtccaaagaggctgacattgactccagc
gatgacagcgacgtagaagaagacatcgatcagccgatggttcacaaggccaaacacgac
ctgatgatgaagaacgagggcagccgcaagggattcttcttcaaacaggccaaaaagtct
taccctatgttccccaccaccgaggagcgtatcaaatgggatgaatatggagaaatcata
aagcccgaagacttcctggtcccagagcttcaagcgactgaggaggagaagagcaagttg
gagtcaggcttgacaaatggagaagaaccaatggaccaggacctgtctgatgtccccaca
aagtgcatctctgcaacggagcccatggagataaaggccagagtcacatacattgactac
gaggggaggtctgacggtgactccatcaagaagatcattaaccagatgaaacccagacag
ctggtaattgtccacgggccccctgacgccagccaggaccttgcagaagcctgcagagct
tttggagggaaagacataaaggtttacaccccaaaacttcacgagactgtggatgcaact
agtgaaacgcacatataccaggtccggttaaaagactccctggtcagctctctcaagttc
tgcaaagctaaagacacagagctcgcctggatagatggcatgctggacatgcgggtgtcc
aaggtcgacaccggggtcatcttggaggaaggagagttgaaagaggaaggagaggacagc
gagatgcaagtagacgtaacgccagtggatgccagcaccatcgctcaacagaaagttata
aagagcctgtttggagatgatgacaaagaatttacagaggaaagcgaggtcatccctacc
ttggagcccttgacaagtactgaggttcccggacatcagtctgtgttcatgaacgaaccg
agattatcagatttcaagcaggtcctgctccgggaaggaatacaggcggaattcgtggga
ggcgtcctcgtctgtaacaacttggtggcggttcgcaggacagagacgggacgcatcggc
ttagaggggtgcatctgtgaggacttttacaaaatccgagaactcttgtattcccagtac
gccattgtctga
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