Aquarana catesbeiana (American bullfrog): 141117213
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Entry
141117213 CDS
T11018
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03013
Nucleocytoplasmic transport
acat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141117213 (PNN)
03015 mRNA surveillance pathway
141117213 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acat03019
]
141117213 (PNN)
03041 Spliceosome [BR:
acat03041
]
141117213 (PNN)
Messenger RNA biogenesis [BR:
acat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
141117213 (PNN)
Spliceosome [BR:
acat03041
]
Complex C
Other components
EJC/TREX
141117213 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
141117213
NCBI-ProteinID:
XP_073466029
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All DBs
Position
LG13:77516875..77538293
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AA seq
697 aa
AA seq
DB search
MAVAVRTLQEQLEKAKENLKNVDENIRKLTGRDPNDSRPAPARRLTITGPNAIGGRGRGG
IVLRRGLSEGGGGPPAKQRDFEGALSRLGGDRRQRRESRQESDAEDEDDKKPALQSSVVA
TSKERTRRDLIQDQTIDEKGKQRNRRIFGLLMGTLQKFKQESNVATERQKRRQEIEQKLE
VQAEEEKKQVENERRGLFEERRAKQTELRLLEQKVELAHLQEEWNEHNVKIIKYIRTKTK
PHLFYIPSRMCPPTQKLHEESQKKLNGIFEKRRAEFAEHLNKMEARPRRHSMKEKDEEKK
QGDENEEQKEDREDGKVARHERVEETGNLSNDIEMEDTFEEEKDVGARDVEMVQETSLME
DGEDSKVEEKIEEEGRVVVEEPQISKWEEQEAEVEEEVVKEEEEHKDSMDEDHQEVADVS
QSTGLELADETNQSKEVESEEKADEGSDTKLDEAETAKTNEPEPDTETDSTEKREQEREP
DLMFQPPLDYEPQTRLETHYHVEEEQVVEKEEGVAIVENTPEIQVEQPQITSSEHKEKSS
KNRGRTRNKVEKSRSRSSSSSSSSSSSSSSSSGSSSSSSSSRSSSSSSSSSSGSSSRDSS
SSSSSSSSESRSRSRGRGHVRDEKRRRSTERKRRDTSGVERSHKSSSKVNSRDSKGSKDK
GSSRSDRKRTNSEGSRSGKRPSRSERDRKSDRKDKRR
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagccgtgcgtactctgcaagagcaactagaaaaggcgaaggagaacctgaag
aatgtggatgagaatatccgcaaactgaccggccgcgacccgaacgatagcaggcctgca
cctgcaagacgactgaccatcacaggcccaaatgcgattggaggtagaggccgtggtggc
attgtgctacggcgtggactctctgaaggtggaggaggacccccagccaaacagagggac
tttgaaggtgcactgagcaggctgggcggggatcgtcggcaaaggagagagtcacgccag
gaaagcgacgctgaggatgaggacgataaaaaaccggcgttgcaatcctcagttgttgct
acctccaaagaacgtacccgccgagatcttatccaggaccaaactattgatgaaaaaggg
aagcaaagaaatcggcgaatatttggcctgttgatgggtacccttcaaaagtttaagcaa
gaatcaaatgttgctacagaaagacaaaagcgacgtcaagaaattgaacaaaaactcgaa
gtgcaggcagaagaagaaaaaaaacaggtggaaaatgaacgtcgagggctttttgaggaa
agacgtgccaagcaaaccgagctgcgactattggagcagaaagttgagttggcacacttg
caagaagagtggaatgaacacaatgtcaaaattatcaaatatatcagaacaaaaacaaaa
ccccacctgttttacatacctagcaggatgtgcccaccaacacaaaaattgcatgaggag
tcgcagaaaaagttgaatggtatatttgaaaaaagacgagctgaatttgctgagcattta
aacaaaatggaagctaggcctaggcgccattccatgaaagaaaaagatgaagaaaagaag
caaggtgatgaaaatgaagaacagaaggaggatcgagaagatggtaaggtggctcggcat
gagagagttgaggagacaggtaacctgtctaatgacatagaaatggaggacacctttgag
gaagagaaggatgttggtgctagggatgtagagatggtgcaagagactagccttatggaa
gatggtgaagattctaaagttgaggagaagattgaggaagaaggtagagttgtagtagag
gagccccagatcagtaaatgggaggagcaggaagccgaggttgaggaggaagtagtaaag
gaagaggaggaacataaagacagtatggatgaggatcatcaggaggtagcagatgtcagt
cagtcaacaggcttggagttagcagatgagactaaccaaagtaaggaagtagaaagtgag
gagaaagcagatgaaggttcagatactaaacttgatgaagctgaaacagctaaaacaaat
gagccagaaccggacacagaaactgattccacagaaaagcgagagcaggaacgagagcca
gatctaatgttccagccaccattagattatgaacctcaaacaaggctggaaacacactat
catgtggaagaggaacaggtggtggaaaaagaggaaggtgtagcaatagttgagaacact
cctgagattcaagtagagcaacctcaaattacctcatcagaacacaaagagaagagcagc
aagaacagggggaggacgaggaacaaagtggagaaaagtaggagtcgtagtagtagcagc
agtagttccagcagcagttccagctcaagcagcagtggaagcagctctagcagcagcagt
agtcgcagcagttcaagcagtagtagcagcagcagtgggagcagtagcagagacagcagt
agtagcagcagcagtagtagcagtgaaagtcgaagccggagcagagggagagggcatgtt
agagatgagaaacgcaggaggagcacggagcgaaagcggcgagatacatcaggagtagaa
aggagtcacaagtcttcttcaaaagtcaatagcagagactccaaaggatccaaggacaaa
ggctcatcaaggtctgaccgcaagaggacaaattcagaaggtagccggtcaggcaagaga
ccctcaagaagtgagagagaccgtaaatcagacagaaaagacaaaaggcgttga
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