Aquarana catesbeiana (American bullfrog): 141117787
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Entry
141117787 CDS
T11018
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04137
Mitophagy - animal
acat04140
Autophagy - animal
acat04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141117787 (HIF1A)
04137 Mitophagy - animal
141117787 (HIF1A)
04148 Efferocytosis
141117787 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acat03000
]
141117787 (HIF1A)
Transcription factors [BR:
acat03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
141117787 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
141117787
NCBI-ProteinID:
XP_073466921
LinkDB
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Position
LG13:63347613..63412962
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AA seq
805 aa
AA seq
DB search
MEGTAVTDKKRISSERRKEKSRDAARCRRSKESEVFYELSHQLPLPHNVSSHLDKASIMR
LAISYLRIRRLLDAGDMDGESEMEKQLNCFYLKALEGFVLVLTEEGDMIYLSENVNKCMG
LTQFELTGHSVFDFTHPCDHEELREMLTFRNGPSKKGKEQITERSFFLRMKCTLTSRGRT
VNIKSATWKVLHCTGHMRVYDSCNSQNQCGYKKPPMTCMVLICEPIPHPSNIEFPLDSKT
FLSRHSLDMKFSYCDERVTELVGYEPDELLGRSVYDYYHALDSDHLTKAHHDMFTKGQVT
TGQYRMLAKKGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSDIVEKGLILSLGQTESTL
VSSEPAETKMPQFFTKLDEDDDDTNSLYEQLKKKAPESLTVLAPDAGDEIIPLDFNSSDS
EPQYDDAPLYNDVMLHSTSKPPENILVSPLPVPEKPKSLRSNADPALNREVVIKMECSPE
QLGLAFTIPQLSKPSSPSEISSNQGSTEPGTPAEYCFEEDMDIAQEFKMDLVEKLFAIDT
EAKAPFSTKETDLDLEMLAPYIPMDDDFQLRSFDQLSSMETDSTPLQSLGSMTNLFHPST
VSPSTDLKPITTEAMSDPKTIIVHPPAPTIKEVLSAPASPYNGSRSCTSSPVRTDKAAVK
ERSRPGTPTIPSPLNKRSAVLDDELSPKMIALHNVQRKRKIESDGPLFQAVGLGTIFQTN
VDPGANSPLLWKCVKVSDSDKPTGPEQRTILLLSTDMASRLLGQSLDGTGLPQLTGYDCE
VNAPIQGNRNLLQGEDLLKALDQAN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggagggaacagcggtcaccgacaagaaaaggatcagttcggagcgacggaaggagaaa
tctcgggatgctgcaaggtgtcgaagaagtaaagaatcggaggtcttttatgaactgtcc
caccagctgcctctgccccacaatgtcagctctcatcttgataaagcctccataatgaga
ctcgccattagctacctgcgtataagacggctcctcgatgcaggtgatatggatggagag
tctgaaatggaaaaacagctgaattgtttttatttgaaagccttggagggatttgttttg
gtcctgactgaggaaggggatatgatctacctgtctgaaaatgtcaacaagtgcatggga
ctcacacagtttgagctgactgggcacagtgtgtttgacttcactcatccctgtgatcat
gaggagttgcgggagatgctaacatttagaaatggaccatcaaagaagggtaaagagcaa
atcacagagcgcagctttttcctgcgtatgaagtgcaccctgacaagccgggggagaacc
gtgaatataaagtctgccacgtggaaggttcttcactgcacggggcacatgcgtgtgtat
gacagctgcaacagtcagaaccaatgtggatataagaagccacccatgacctgtatggtg
ctgatctgcgaacccatccctcacccatcaaatattgaatttccattggacagtaaaacc
tttctgagccgccacagccttgacatgaagttttcttactgtgatgaaagagttacggag
ctagtgggatatgagccagatgaacttctgggacggtcagtgtatgactattatcatgcc
ctggactctgaccatctgaccaaagcacaccatgacatgttcacaaaagggcaggtgaca
acaggacagtacagaatgctggcaaagaaaggtggctacgtgtgggtggaaacgcaagcc
acagttatatacaacacaaagaactctcagccccagtgtatcgtatgtgtgaactatgtc
ctcagtgacattgtggagaaagggctgatcttgtccctcggccagacagagtccactctg
gtgtcttcagaacctgctgaaacaaagatgcctcagttcttcactaaactggatgaggat
gacgacgacaccaacagtttgtatgagcaactaaaaaagaaggcgcctgagtctcttact
gttcttgcacctgatgctggagatgagatcatacccttggacttcaactctagtgattca
gagccgcagtatgacgatgccccattgtataatgacgtcatgctacactcaaccagtaag
cctcctgaaaacatcctggtgtctccacttccagtgccagagaagccaaagtctctgcgt
agcaatgctgaccctgcgctgaacagagaggtagtgatcaagatggagtgtagcccagaa
cagctggggctggcttttaccattccacagctctccaagccatctagtccatcagaaatc
agcagcaaccagggctcaacagagcctggcactcctgcagaatattgttttgaagaggat
atggacattgcccaggaatttaagatggacttggtagagaaactttttgccattgacaca
gaagcaaaggctccattctctacaaaggaaacggacttggacctggagatgttggctcca
tatatcccaatggatgatgacttccagctaagaagctttgatcagctttcctccatggag
actgattccactcctctgcagtccctgggaagcatgaccaatctgttccatccctctact
gtttcaccctccactgatctgaaaccaatcaccacagaagccatgagcgatccgaagacc
atcattgtgcacccgccggcaccaaccattaaagaggtgctgagtgcccccgcttctcca
tataatggaagccgaagttgcacaagttctcctgtgagaacagacaaagcagctgtaaag
gagagatcccgccctggaactcccactataccaagtccactaaataaaagatctgcggtc
ctggatgatgaattgagcccaaagatgatcgctttacataatgtccagagaaaacgcaaa
attgaaagtgatggccctttgtttcaagcagtgggactaggaacgatatttcaaacgaat
gttgacccaggagcgaactctcctctcttatggaaatgtgtcaaagtatcggactcagat
aagccaactggacctgaacaaagaacaatcctcttattgtctacagacatggccagtcga
ttgctcggacagtcattggacggcactgggcttccacagctaaccggttatgactgcgaa
gtgaacgctcccatacaaggaaacagaaatctgctgcagggcgaggatttattaaaagcc
cttgatcaagctaactga
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