Aquarana catesbeiana (American bullfrog): 141126625
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Entry
141126625 CDS
T11018
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141126625 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acat03019
]
141126625 (NUP98)
03036 Chromosome and associated proteins [BR:
acat03036
]
141126625 (NUP98)
Messenger RNA biogenesis [BR:
acat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141126625 (NUP98)
Chromosome and associated proteins [BR:
acat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
141126625 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
141126625
NCBI-ProteinID:
XP_073468646
LinkDB
All DBs
Position
LG02:complement(10551212..10645877)
Genome browser
AA seq
1775 aa
AA seq
DB search
MFNKSFTSPFGGGSGAFGATSTFGQNAGFGTTQATGFGTTSAFGANNSGGLFGTTQNKPG
GLFGTTTFQQPATSSTTSAFGFGASTGTANSLFGSTNTGGGGLFSSQQSNAFGQAKPSTF
GTFGTSTSSGGLFGNTNTTSNPFGGTTSNLFGGSTFSAAPTGTTIKFNPPSGTDTMAKGG
VTTNINTKHQCITAMKEYESKSLEELRLEDYLANRKGPQNPVGAATATGLFGASTATSSA
ATGLFGSTPASSTFSFGSKNAFGQGTNTFGTTTGGLFGQTAAQPATSLFNKPFGTATTTP
NTAFSFGNANTLGQPQTSTMGLFGSTQATQPTGLFGTTTNTNAASGFGTGTGLFGQTNPT
PFGGVTGSTLFNSKPAGFGTTTTSAPTFGTSTGGLFGFGTNTAGTSIFGNKNAAGTLGPA
LGTGFGPGLNTGQNTLFGNNQQKIGALGTGAFGTTAFNAASGGLGFGGAQAPVALSDPNA
AAVQQLALQQQINALAYSPYGDSPLFRNLIDDPKKKEERLKPTNPAAQKALTTPTHYKLT
PRPAARVRPKALSTTGSAKSQLFDGLDDDEPPMTGGTFMPKKSIKKLVLKSSSNISSLLS
PSNAEAANEVNSPTSYNETGDRSNENHRVEENHEEEVSTFYPPPLSKPLPSSQDKHMDSM
DDTILALNMRPSLRSRGLDVSVDENSLNEEEIMNDVPPHPAGIVLSREGYYTIPSMEELA
NMMDDNGECIVDGFTIGRKGYGSIFFEGLVNVTNMNLDEIVHIRNKEVIVYTDDTNKPPV
GEGLNRAAEVTLNEVWPINKTTRELIKSPEQLAEMNYKSKLEAASRKQGAQFKEYRPETG
SWVFRVKHFSKYGLQDSDEEDDGSASTAENKKIKSATLPPPGQQAPPPAQATLDGKLSPP
PQGSVAELLGHALELDSDMVDVTQETFKETAMEDLEVPEDQESLSASIHIASSLGVNPHA
LQVMKASLLMDEDGVTDLLSPYGHYPSLLETSQEGRSPRLLHPSSQAQRTSSVGGLLQSR
FTGSSLLKQSESGQSPRPSSSASMGAPWPGLGLLAPSFLMPSPAPEIQLKTVGTQRQQGL
VPLKKSICTGRGRMLIDMGLFMGRSFRVGWGPNWTLVHSGKVISESSMVEKTDKQGNDYG
FLPKPVPAKSLMESPFKVHLEKLSLEEKGKDLQSYLIPLEIELKNSTIKPEPCPLLIPNP
GFAAIHDYAGWVSEECQEPSEMEAVVKQWCLTWTMCKALWGQLRELEASLDETNQYVERL
QRRKAFSHWLAETAVDRIESEVVMHQKERPIEAVFSYLTGCRISEACRLAQRSGDHRLSM
MLSQLVGSQQLQELMRMQLEDWQKQQVDRFIQEERLKVYVLLSGTAVWQSSDKKSINVCS
QLDWKRALAVHLWYMLPPTASIAQALQKYEEAFQVSDEGQCYASYPLPSYLENADLAMES
ETFPPSMQRDVCFHLLKLYSDRSYDLRQLLDPRSITSDPLDYRLSWHLWMVLQALNYTHL
SAQSQGVLHASYAAQLENVGLWEWAVFVILHIPDPVVRESAVRELLIRHCVLQETPESLM
KEKFLIEKLCIPAQWIHEAKAIRSRREGDQHKEAIYLLRAGHWNQCHRLVSRHLASDAII
NENYSYLHSFLDELSRPENCVHIQGWDTAGQVCLDYITIIEMLNSIRQSECSVYELERLH
NKVISVCNRVEQIQCYKSKDRLAQSEMAKRVANILRVVLRLQHSPESDDTADLQRVPLRL
LAPHIGRLPMPEDYAMEELRSLTQSYLRELTLHSQ
NT seq
5328 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaatcgttcacctctccgttcggaggaggcagcggagcctttggagccacg
tctacatttggacaaaatgctggatttggcacaacgcaggcgactggatttgggacaacg
tcggcatttggagcaaataacagtggcggattgtttggaaccacgcagaataaaccaggc
ggactgtttgggaccacaacattccaacaaccggcaacctcctccaccacctccgccttt
ggtttcggagcttcgaccggtacggcaaactccttgtttgggtcaacgaatactggagga
gggggtctcttctcatcccagcagagcaatgcctttggacaggcaaagccatcgactttt
ggcacattcgggacgagtacaagcagtggaggtctcttcggaaacaccaacaccacctcc
aacccctttggtgggaccaccagtaacctgtttggtggttccaccttctctgcagctccc
actggaaccaccataaaattcaatcctccatctgggactgacaccatggccaagggtggt
gtcaccaccaacatcaacacaaagcatcaatgtataactgcaatgaaggagtatgaaagc
aagtctctggaggaactgcgtctggaagattacctggccaataggaaggggccccagaat
ccagtgggcgcagccacagcaacaggcttgtttggagcctctactgccacttccagtgca
gccacgggactgtttggctccacccctgccagcagcacgttctcctttggaagtaaaaat
gcctttggacagggcaccaacacttttggaaccaccacgggaggtctgtttggccagacg
gctgcccagccggccaccagcctgtttaacaagccatttggaacagcgactacaacaccc
aacactgccttctcattcgggaacgccaacactttggggcagccccaaaccagcaccatg
ggtctctttggcagcacgcaggccacacagcccacaggactgtttggcaccaccacgaac
accaatgctgcctctggctttggcactggaaccggtctgttcggacagacgaaccccacc
cccttcggaggcgttaccggctcgaccttattcaacagcaaacctgctggcttcgggacg
actaccaccagcgcaccgacgttcggcacttccaccggcggcctttttgggttcggaacc
aacaccgcgggcaccagtatttttggcaataagaacgcagcgggtacgctggggccggca
ctggggacaggatttgggcctggtctgaatacaggtcagaacacgctgtttggaaacaac
cagcagaagatcggggccctcggtaccggagcatttggcacaaccgcgtttaatgccgct
agcggtggcttggggtttggtggtgctcaggcccctgttgctctgagtgaccccaatgca
gcggctgtccagcaattggctctccagcaacagatcaatgccctggcctactctccatat
ggggactcccctctcttcagaaatctcatcgatgaccccaagaagaaagaggagcgtctg
aagcccaccaacccggctgcccagaaagcactgaccacgcccacgcattacaagctgacc
ccccgtcccgcggccagggtgcgccccaaagcgctgagcacaacagggagcgccaagtcg
cagctcttcgatgggttggacgatgacgaaccgccaatgacgggcggaactttcatgccg
aagaagagcatcaagaagctggtcctgaagagctcctccaacatcagctccctcttatct
ccttccaatgccgaggcagccaatgaggtgaactcccccaccagctacaatgagaccgga
gacaggtccaatgaaaatcacagagtggaagagaaccatgaagaggaggtgtccacgttc
taccctcctccattatccaaacctctcccctccagccaggacaagcatatggacagcatg
gatgacaccatcttggccctgaacatgaggcccagcctgaggagcaggggactggatgtc
agcgtggatgagaattccctcaacgaggaggagatcatgaatgacgtcccaccacaccct
gcaggcatcgttctgtccagagaaggttactacaccatcccatccatggaggagctggcc
aacatgatggatgacaatggagagtgcattgtagatggcttcaccatcggccgcaaaggc
tacgggtccattttctttgagggactggtgaatgtgactaacatgaacctggatgaaatc
gtccatatacggaataaggaggtgatcgtgtacaccgatgacacaaacaagccgccagtg
ggagaaggcctgaacagggctgctgaagtgaccctgaatgaagtctggccaatcaataag
accacccgagagctgattaagagccccgagcaactggctgagatgaactacaaaagcaag
ctggaggccgcttcccgcaagcagggagcccagttcaaggagtaccgtcccgagaccggg
tcctgggtgttcagggtgaagcatttctcgaagtacggcctgcaggactcggacgaggaa
gatgacgggtcggcttctacagcagagaataagaagataaaatccgcgactctcccgccc
cctggacaacaagcacctcccccagcgcaggccaccctggatggaaagctcagtcctcca
ccacagggctcagtggcggaactgttgggacacgctctggagctggacagcgacatggtg
gatgtgactcaggagacgttcaaggaaacggccatggaagatctggaggttccggaggat
caggaatcgctctctgcctccatacacattgcctcttctctcggggtgaaccctcatgct
ctgcaggtgatgaaggcgtctcttctgatggatgaagatggtgtgacggatctcttatct
ccttatggccactacccatccttgctggagacctcacaggaagggcgctccccccgactc
ctccacccctcctctcaggctcagcggacctccagtgttggaggtctcctgcagtcccgc
ttcactggatcttcattactcaaacagagtgagtctggtcaaagtcctcgtccatcttca
tcagcctccatgggggccccatggcctggcctgggtctcctagccccctccttcctgatg
ccatctcctgccccagaaatacagctgaagactgtggggacccaaaggcagcaaggcctg
gtacccctcaagaagtccatatgcactggccggggcaggatgttgattgacatgggcctg
tttatgggacggtcgttccgggtcggttgggggcccaactggactttggttcacagcggg
aaggtcatcagcgagtccagcatggtggagaaaaccgacaaacaagggaatgactatgga
tttctgcccaaaccagtccctgccaaatcacttatggaatctccgtttaaagtccacctg
gagaagctgagtttggaggagaaggggaaggatcttcagtcttatctgatcccactggag
attgagctgaagaacagcaccataaagcctgagccatgtcctctccttatacccaaccct
ggctttgccgccattcatgactacgccggatgggtcagtgaagagtgccaggagccttca
gagatggaagctgtggtaaaacagtggtgcctaacgtggaccatgtgcaaggcgttgtgg
ggccagctgcgggaactggaggcaagcctagatgaaaccaaccagtatgtggagagatta
cagcgcaggaaggccttctcccattggttggctgagacggcggttgatcgcattgagtcg
gaggtggtgatgcaccaaaaggaacgtcccatcgaggccgtcttcagctacctgaccggc
tgccgtatcagtgaggcgtgtcgactggcgcagagatctggggaccatcggctctctatg
atgttgtcgcagttggtgggcagtcagcagctacaggaactgatgcgtatgcagctggag
gactggcagaagcagcaggtggaccgcttcatccaggaggagaggctgaaggtctatgtg
ctcttatctggcactgcggtatggcaatcctccgataagaaatccatcaatgtctgctca
caactggactggaagcgagcgttggctgttcacctctggtacatgctcccacctaccgcc
tccatcgcccaggcactacagaaatacgaggaggcttttcaggtgtcggatgaggggcag
tgctatgcatcctaccctctgccttcatatctggagaacgctgacctcgctatggagtcc
gaaaccttcccaccatctatgcagagagacgtctgcttccaccttctgaagctgtacagt
gacaggtcttatgacctacgccagctcttggacccccgaagtatcacctccgaccccttg
gactatcgtctcagctggcacctctggatggttctacaggccttaaattacacccacctg
tcagcacagagccagggagtgctgcacgccagctatgccgctcagctggagaatgtgggg
ctgtgggagtgggccgtcttcgtcatccttcacatccctgaccctgtggttcgggagtcg
gctgtgcgagagctcctgatccgacactgcgtcctgcaggagactccggagtcgctgatg
aaggagaagttcctgattgagaagctctgcatcccagcacaatggatccatgaggcaaaa
gccatccgttccagaagagaaggagaccaacacaaagaggccatctacctcctgagagcc
ggccactggaaccaatgtcaccggctggtctcccgccatctggcttcagatgccatcata
aatgagaattactcctacctacacagcttcttagatgaattgtcccgtcctgagaactgt
gtccacatccagggttgggacacggcaggacaggtctgcttggattacatcactatcata
gagatgctgaacagtatccggcagagtgaatgttcggtgtatgagttggagaggttacac
aataaagtcatctccgtctgtaaccgggtggagcagatccaatgctacaaatccaaagac
aggttggctcagtccgaaatggcgaaacgcgtcgccaacatcctccgtgtcgtccttcgt
ttacagcattcaccagaatctgatgacaccgccgacctccagcgagtccccctcaggctc
ctcgccccccacatcggccgactccccatgccagaggactatgctatggaagaactccgc
agtctcacgcagtcttacttgagagaactgactttgcacagccagtag
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integrated database retrieval system
