Aquarana catesbeiana (American bullfrog): 141126665
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Entry
141126665 CDS
T11018
Symbol
ATG16L2
Name
(RefSeq) protein Atg16l2 isoform X1
KO
K20868
autophagy-related protein 16-2
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141126665 (ATG16L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acat04131
]
141126665 (ATG16L2)
03029 Mitochondrial biogenesis [BR:
acat03029
]
141126665 (ATG16L2)
Membrane trafficking [BR:
acat04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
141126665 (ATG16L2)
Others
Specific organelles associated proteins
Auto phagosome
141126665 (ATG16L2)
Mitochondrial biogenesis [BR:
acat03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
141126665 (ATG16L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WD40_WDHD1_1st
WDR55
ATG16
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_VPS8
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_SPT8
Beta-prop_SCAP
DUF7000
Motif
Other DBs
NCBI-GeneID:
141126665
NCBI-ProteinID:
XP_073468714
LinkDB
All DBs
Position
LG02:complement(15875677..15978949)
Genome browser
AA seq
631 aa
AA seq
DB search
MQRPGGDSGIRWKRNIVHQLRHRDRTQHTAFRDLVLSYNKLLEKSVFLKDLTEKIQTESL
ASPGIHHAARSPSDASHSPGSGDLSALQKEIAEIKTSNGELAFEACERKKQVQESDDRLK
EQNTKIAGLADEEEARRVQRQCLEEEEVWLVCENADLKEKYDHLLTQRLWMEQELKEKEI
EQREMIEKMTKEKAIQAEQQNDLNDRWWKESWKRTVKKALTKTLSAEGGSKDDSQILLSS
CWLRPISDISVIIDIRQHRSSDSLDSRSLDWPGSLEGEKLQPRKNRSQSMIALGSSRFLG
AVKSLFDLNFRRDRTGCEMEECWYHPRSVCVICSLPRRALYSKEIHDSEIHAVRFSPNSK
MVATGGADRMVKLWYIVGGQLQMHQTLQGSNGGITSIEFDPEGLQLLAASFNGSAHLWKL
DGRSKETLTGHTGKVTAAKFKMSVHRAVTCSMDRTIREWDLQKAACIRQIPVSSYCSDVV
CSDMYTISGHHDKKIRFWDSRSENCVRELTMEEKITSLSIGQDQTQLLSCSRDDALSLID
LRRGEILHAFRADGFKCGCDWTKAVLSPDSSYAMAGSSDGTIFIWNTQTGLLERSLNGEH
RAAVNAVAWSLSGDYVVSVDRGRKAVLWSEY
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggccggggggagactccgggatccgatggaagcggaacatcgtccaccaacta
cgacaccgggaccggacccaacacaccgccttccgggacctcgtcctgtcctacaataag
ctattggaaaagtcagtttttctgaaggatctgactgaaaaaatccaaactgaatcactt
gcttcccccgggatccaccatgcagcgaggtctccttcagatgcatcccatagtcctgga
tcaggtgacctttccgcactacagaaggaaattgctgaaattaagacatccaatggtgag
ttggcgtttgaagcctgtgagcgaaagaaacaagtgcaggagagcgatgatcggttgaag
gagcagaacaccaagatagctgggctcgcagatgaggaggaggcgcgtcgggtgcagcgg
cagtgtctggaggaggaggaggtctggctggtctgcgagaacgctgacttgaaggagaag
tatgaccacctgctgacccagcgcctctggatggagcaggagctgaaagaaaaggagatc
gagcagagagaaatgatcgagaaaatgactaaggagaaggccattcaggcggagcagcag
aacgacctgaatgataggtggtggaaagagtcgtggaagcgcacggtcaaaaaagcgtta
acgaaaacgcttagcgctgaaggaggctctaaagacgattcgcagattttgttatcctcg
tgctggctgcgccccatttctgatatatctgtcataatagacatccggcagcatcgctct
tccgattcgctggattccaggagtctggattggcccgggagcctggaaggggagaaactg
cagcccaggaagaacaggtcgcagtctatgatcgcattaggttcctccagattcctggga
gcagtcaaaagtttgtttgatttaaatttcaggagagatcggacaggttgcgagatggaa
gagtgctggtatcacccgcgctcggtgtgtgtcatatgtagtctacctaggagagcactc
tacagtaaggaaatccacgattctgagatccacgcggtcagatttagccctaattccaag
atggtggccaccggaggagcagaccgaatggtgaagctttggtatattgttggaggtcag
cttcagatgcaccagaccctacaaggaagtaacggaggaatcaccagtatagaatttgat
cccgagggtctgcagctcctggcagcgtcttttaatggctcggctcatctctggaaactg
gatggtagatccaaggaaactctgacaggacacaccgggaaagtgacggcagccaagttt
aagatgtcagtgcatcgtgcggtcacctgcagcatggatcggaccatcagggagtgggac
ctgcagaaagcagcctgtatccggcaaattccagtctcctcgtattgcagtgatgttgtt
tgttccgatatgtacacaatcagtggtcatcacgacaagaagattcggttctgggacagc
aggtcagagaattgtgtccgggagttgaccatggaggagaagatcacctccctcagcatc
ggccaggaccagacgcagctgctcagctgttcccgcgatgatgcgctcagtctgattgac
ctacgacggggggagatcctgcacgccttccgagctgacggattcaaatgtggctgtgat
tggaccaaagcagtattaagcccggactccagttacgccatggccggatcctcagatggg
accatcttcatctggaacacccagacaggcctgctggagaggagcctgaacggggaacac
cgtgctgctgtgaatgctgtggcctggtcactttctggggattatgtggtcagtgtggac
cgagggaggaaagccgttctctggagtgaatactga
DBGET
integrated database retrieval system
