Aquarana catesbeiana (American bullfrog): 141127101
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Entry
141127101 CDS
T11018
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
acat Aquarana catesbeiana (American bullfrog)
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acat04040
]
141127101 (TRPC4)
Ion channels [BR:
acat04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
141127101 (TRPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
AvrB_AvrC
YVC1_C
Motif
Other DBs
NCBI-GeneID:
141127101
NCBI-ProteinID:
XP_073469386
LinkDB
All DBs
Position
LG02:100994600..101295882
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AA seq
967 aa
AA seq
DB search
MAQFYYKRSNSSPFQDRIPLRIVRSESELSPYEKAYLTSVEKGDYASVKQALDEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSYNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKHLVQKGVSIPRPHEVRCNCVE
CVSGSDVDSLRHSRSRLNIYRALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSKQCKQFAKDLLDQTRSSRELEIILNYRDDSGLLEEQNGNDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCVIIGLLFPVFSACYLIAPKSNLGLFIR
KPFIKFICHTASYLTFLFLLLRASQNEYNINQPGPIPAPIEWMILPWVLGIIWAEIKQMW
DGGFQDYVHDWWNLMDFVMNSLYLATISLKIVAYTQYNSELITRNQWDMWHPTLVAEALF
AIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFNY
DTNNFDNKTLNCTGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTKVQPDHKFTEFVG
ATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPF
NIIPSPKSAWYFFKWIQKQVCKQYTRKKPQSFGTIGRRAADNFRRHNQYQEVMKNLVKRY
VAAMIRDAKKEEGLTEENFKELKQDISSFRFEVLGLLKGNKLNLNNTKMSNSSDNSEAEE
KSRPKEKKSRTQKNRISFFDITTMIHPRTAEITAEKHNISNGSATLASETAKEKPKKIQF
SKDIKSFGLFHRRPKSSSMEQSSNKIYSVSEEVPEELISNPSEKTLDTVKDLEPNCELNV
NTLNEQCTVTEDTRDTLVCLPLQPSDSFVNDSPTDNVEPTIDKDVISETSSTQAEKPAEE
EDSITRL
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctactataaaagaagcaacagctctccatttcaagaccggattcccctg
cgcattgtacgttctgaatcggagctctcaccatatgagaaagcttacctgacctcagta
gagaaaggtgactatgccagcgtgaagcaagccctggatgaggcagaaatttatttcaaa
atcaatattaattgcattgatcccttaggaagaactgctttattgattgccattgaaaat
gagaatcttgagctgattgaacttttgttaagttacaatgtctatgttggagatgcttta
ctgcacgccatacggaaagaagtggtcggggccgttgaattgcttttaaaccacaaaaaa
ccaagcggggaaaaacaggttccaccaatactgctggataaacagttctctgaatttact
ccagacattactccaatcattttggctgctcatacgaacaattatgaaattataaaacac
ctggttcagaaaggtgtctcaatcccaaggccacacgaagttcgatgtaactgcgtggaa
tgcgtttctggttctgatgtggatagtttacggcactctcgctcaaggctgaatatctac
agggctctggcaagcccatctctaattgcactgtcaagcgaggatccctttctaactgcg
tttcaactaagctgggagcttcaggagttaagtaaagtggaaaatgagtttaaatctgag
tatgaggagctgtcaaagcaatgtaagcaatttgcaaaagaccttctggaccaaacaaga
agctctagggaattggaaattattcttaactatagggatgatagtggtcttttggaagag
cagaatggcaatgaccttgcccgtctgaaattggcaattaagtaccaccagaaagagttt
gttgctcagcctaactgtcagcagctgttggcatcgcgctggtatgatgaatttccaggc
tggaggagacggcactgggcagtgaagatggtgacgtgtgtaataattggactacttttc
ccagtcttctcggcttgttacctaatagctccaaaaagcaaccttggactctttatcagg
aagccattcatcaaattcatctgccacactgcatcatacttgacttttctcttcctcttg
ctgagagcgtcacaaaacgaatacaacataaaccagccaggaccaatacctgctcccatt
gaatggatgatattaccgtgggttttgggtatcatttgggctgaaatcaagcagatgtgg
gatggaggatttcaagattacgtccatgactggtggaacttaatggattttgtgatgaat
tcattatacctggcaactatttcattgaaaattgttgcatatacacagtacaattcagaa
ttaatcactcgaaatcaatgggacatgtggcatccaacactggttgctgaagcattattt
gctatcgccaacatctttagctctttgcggctgatttcattgttcacagctaattctcac
ctgggtccccttcagatttctttaggaagaatgcttctggacattttaaagttccttttt
atatattgtcttgtgctacttgcatttgccaatggtttgaatcaattgtactttaactac
gacaccaacaactttgataataaaaccttgaactgcactggcatccgttgtgaaaaacaa
aacaatgccttctcaacgttatttgagactcttcagtccttgttctggtcaatttttggc
ctcatcaatctctatgtaacaaaggtgcaacctgatcacaagttcacagaatttgttggt
gcaaccatgtttgggacctataatgtcatctccttggttgttcttctaaacatgttaata
gccatgatgaacaactcctaccagctcattgctgatcatgcagacatcgaatggaagttt
gctagaacaaagttgtggatgagttattttgaagaaggtggaacacttcccactccattc
aatataatacctagccccaaatctgcgtggtatttttttaaatggattcagaaacaagta
tgcaagcaatacacaagaaaaaagcctcaaagctttggaacaatcggtagaagagcagct
gacaatttccgaagacataatcaatatcaggaggtgatgaagaaccttgtgaagagatat
gtagcagcaatgatcagagatgccaagaaagaagaaggactaacagaagaaaacttcaag
gaattgaaacaagacatttcaagcttccgttttgaggttttgggtttgttaaagggaaac
aaactaaatctcaataatacaaaaatgagcaacagctcagataactcagaggcagaagag
aagagtcggcccaaggaaaagaaaagtcgaacacaaaaaaacaggatcagcttctttgat
atcaccacaatgatccatcccagaacagcagagataactgctgaaaagcataacataagt
aatggatctgccaccctggcttcagagactgccaaggagaagccaaagaaaattcagttt
tccaaagacataaaaagctttgggctttttcacagacgtccaaaatctagcagcatggaa
cagagctctaacaaaatctactctgtttcggaggaagttccagaagaactcatatccaat
cccagtgaaaaaacattggacacagtcaaagatctagagccgaactgtgagttaaatgta
aatactttgaatgaacagtgtacagtaacagaagatacccgggataccttggtatgtcta
ccactacagccttccgacagttttgtaaatgacagtccaacagacaatgttgaacccact
atagacaaagatgttatttcagaaacaagtagcacacaagcagaaaaacctgcagaagaa
gaagattccataacaagactgtga
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