Aquarana catesbeiana (American bullfrog): 141127149
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Entry
141127149 CDS
T11018
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03410
Base excision repair
acat04140
Autophagy - animal
acat04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
141127149 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141127149 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
141127149 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acat03036
]
141127149 (HMGB1)
03400 DNA repair and recombination proteins [BR:
acat03400
]
141127149 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acat04147
]
141127149 (HMGB1)
Chromosome and associated proteins [BR:
acat03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
141127149 (HMGB1)
DNA repair and recombination proteins [BR:
acat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
141127149 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
141127149 (HMGB1)
Exosome [BR:
acat04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
141127149 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
141127149
NCBI-ProteinID:
XP_073469465
LinkDB
All DBs
Position
LG02:<113348932..113352103
Genome browser
AA seq
222 aa
AA seq
DB search
MAKADKVRYEKEMGKGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSER
WKTMSAKEKGKFEDMAKADKVRYEKEMKTYIPPKGESKKRFKDPNAPKRPPSAFFLFCSE
FRPKIKGEHPGLTIGDVAKKLGEMWNNTPSEDKVPYEKKAAKLKEKYEKDVAAYRAKGKP
EAPKKAPAKPEKSKKMEDDDDDEDDEDDEEDEEEEDDEEDDE
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcagataaagttcgttatgaaaaagaaatggggaaaggtgatcctaagaaa
ccaaggggaaagatgtcctcttatgcttactttgtgcaaacttgcagagaagagcacaag
aaaaagcacccggatgcatctgtaaactttgcagagttctccaagaagtgctcagaaaga
tggaagactatgtctgctaaggaaaagggcaagtttgaagatatggcaaaagcagataaa
gttcgttatgaaaaagaaatgaaaacttatataccgcccaaaggagagtcaaaaaagagg
tttaaagacccaaatgcaccaaagagaccaccatcggctttcttcttgttctgctctgaa
ttccgtcctaaaatcaaaggtgagcacccaggtttgaccattggagatgtggcaaagaaa
cttggagagatgtggaataataccccatctgaagacaaggtgccttatgaaaagaaagct
gccaaactgaaggagaaatatgagaaggatgttgcagcgtatcgggccaaaggaaagcct
gaggcacccaaaaaggcacctgctaaacctgaaaagagtaagaaaatggaggatgatgat
gacgatgaagatgatgaagacgacgaggaggatgaggaagaagaggatgatgaggaagat
gatgaataa
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integrated database retrieval system
