Aquarana catesbeiana (American bullfrog): 141127315
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Entry
141127315 CDS
T11018
Symbol
HNRNPA1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141127315 (HNRNPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acat03019
]
141127315 (HNRNPA1)
03041 Spliceosome [BR:
acat03041
]
141127315 (HNRNPA1)
Messenger RNA biogenesis [BR:
acat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
141127315 (HNRNPA1)
mRNA cycle factors
Common to processing body (P body) and stress granule
141127315 (HNRNPA1)
Spliceosome [BR:
acat03041
]
Common components
Common spliceosomal components
hnRNP proteins
141127315 (HNRNPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RBD_AKAP-17A
DUF4715
RRM_3
Motif
Other DBs
NCBI-GeneID:
141127315
NCBI-ProteinID:
XP_073469723
LinkDB
All DBs
Position
LG02:149229769..149243337
Genome browser
AA seq
398 aa
AA seq
DB search
MHKSEAPKEPEQLRKLFIGGLSFETTDESLRNHFEQWGALTDCVVMRDPGSKRSRGFGFV
TYANTEEVDAAMNARPHRVDGRMVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEESH
LRDYFEQYGKIEAVEIMTDRTNGKKRGFAFVTFEDHDSVDKIVIQKYHTINDHNCEVRKA
LSRQEMSTASSSQRGRGGGGGGNFGRGGGGFGGSESYGGRGGNFGGSRGGGGFSGRGGYG
GGNDGGYNNGFGNDGYGSNPPYSGNRGYGGGQGYGGGGGQAGYGGSGGGYDGYSGGGSGF
GGGNGNWQDYIVSFLTPFFMSLFLLNIFYFFKGNFGGSSGGGGSGSYSDFGSFNNQSSSN
FGPMKGGNYSARNSGPYSGGGYGGGSSGGSGYGGGRRF
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcacaagtcagaggcacccaaggaacctgaacaactccgcaagcttttcattggcggt
ttaagcttcgagacgacagatgaaagccttcgaaaccattttgaacaatggggcgcccta
accgactgtgtggtcatgagagatccaggctcaaaacgatcccgtggctttggctttgtt
acttatgctaacactgaggaagttgatgctgctatgaacgcaagaccgcatagggtggat
ggtcgcatggtggagcctaaacgagcagtttccagagaggactcccaaagaccaggagca
catctaactgtaaagaaaatctttgttggaggaataaaagaggacacagaagaatctcac
ttacgagactattttgaacagtatggaaagatagaagctgttgagataatgacagaccgc
actaatggcaagaaaagggggtttgcctttgttacttttgaagaccacgattcagtcgac
aaaattgtcattcagaaataccataccatcaatgaccacaattgtgaagtaaggaaagct
ttgtccaggcaagagatgtccacagcatcgtccagccaaagaggacgtggtggcggagga
ggaggaaactttggacgtggtggtggtggttttggtggcagtgaaagctatggtggccgc
ggaggaaactttggtggaagcagggggggtggtggttttagtggacgtggtggatatgga
ggtggcaatgatggtggctacaacaacggatttggcaatgatggatatggaagcaaccca
ccctactctggaaaccgtggatatggaggtggacaaggttatggaggaggcggtggccaa
gctggttatggtggaagtggtggtggatacgatggctatagtggcgggggcagtggattt
ggtggtggaaatggtaattggcaagattatattgtgtcgtttcttaccccttttttcatg
tctttgtttcttctaaatattttttatttttttaaaggaaactttggtggcagcagtggt
ggcggtggtagcggcagctacagtgactttggcagcttcaataaccagtcatcttcaaac
tttgggccaatgaaaggtggaaattacagtgcaaggaattctggaccttatagtggtggt
ggctatggaggtggttccagcggtggcagtggatatggtggcggaagaagattttaa
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