Aquarana catesbeiana (American bullfrog): 141127744
Help
Entry
141127744 CDS
T11018
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04382
Cornified envelope formation
acat04510
Focal adhesion
acat04512
ECM-receptor interaction
acat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141127744 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141127744 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
141127744 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141127744 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acat04147
]
141127744 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
acat00536
]
141127744 (COL4A2)
Exosome [BR:
acat04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
141127744 (COL4A2)
Glycosaminoglycan binding proteins [BR:
acat00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141127744 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
141127744
NCBI-ProteinID:
XP_073470595
LinkDB
All DBs
Position
LG02:289367607..289680148
Genome browser
AA seq
1738 aa
AA seq
DB search
METSENRKRCLRLHPLWKQNFLPWVLLLIVLVMGFPGSVDAGGKSYTGPCGGRDCSEGCQ
CFPEKGSRGQPGQLGGQGPQGPPGIIGIAGLQGRKGDKGERGHPGISGPTGDKGQNGVTG
FPGANGVPGHVGQGGSRGKPGHDGCNGTKGDAGEAGFQGPRGPLGPLGNPGIKGHKGEPF
YISEDMKKRIRGEPGEPGLAGYPGPNGQPGKVGFIGPMGELGLPGPPGPPGSPGPPGSKG
IGFFGQKGEMGDPGKPGPPGVPCQTQGEPGTTGPTGAPCHLEQVKPSDTSIIDYVAEKGE
KGERGDYGAPGEHISSGERGEEGIMGFPGTRGPSGNDGAPGEKGENGLPGLNGNPGKPGF
KGLKGEEGERGAPGPPTYVTNLKTQKGEQGDAGFPGNVGLDGETGEKGSPGLPGLKGLPS
FFPGPPGSPGLKGEKGQKGYQGNPGLPAFQKGRYGEPGEPGPRGPNGFPGYPGGRIGRKG
AKGSPGNDGSDGYPGFAGLKGLKGEQGECKCSAGDEATKGPAGDPGPIGFPGLTGEIGPK
GEKGDRGGPGLPGAPGIKGLPGFNGLPGPVGEKGDKVNATEKGAKGERGTPGTLGAVGFE
GFPGKDGLYGIPGSSGPPGDAPKGLIGEPGFTGSPGLEGAQGEPGLPGVAFAGPKGARGA
PGQPGRDGSPGIPGLQGLPGDCFKEPGEDNEVGQRPIFPGRGCTLTPPPAPAGTRGPPGL
PGFNGVRGVKGQIGQSGADGMHGFKGVRGDTGPDSLPGPQGFPGRRGDRGKPGTPGLPGE
RGPSGNPGAQGYQGKKGSPGDVLGAPSGSRGDAGWPGFSGLKGVQGDAGFPGFRGIDGSP
GTPGLKGISGDPGIPGTPGLPGPPGNGGFPGMPGKPGKPGTVGLSGLPGSPGPRGDEGEQ
GNPGQPWKKGAAGDEGELGITGIRGRIGDPGFPGLTGMGGHPGVKGVKGSPGMAGFQGMK
GEKGQPALDGPKGQYGNFGLPGERGNLGVSGNKGDRGEEGPPGTQPKIEEGMLDKMKGEK
GNLGVTGSPGFPGLNGTKGIPGQPGIPGQAGSPGMPSFEKGNKGDAGQSGFLGFPGSPGQ
VGPPGIRGFPGFTGPRGSKGMPGLYGIPGYKGDLGDKGEIGDSMDLPGQRGNKGVMGDHG
FPGQRGIHGEKGFSGDGGFPGIEGMSGDPGQPGQKGERGLPGLLGISGTQGDPGFPGVHG
EKGSSGIFGLPGQQGFPGLRGRSGLDGLKGTKGLQGPAGVDVFGVRGIKGTPGQKGDQGE
HSNLAGLPGNTGGTGARGEPGLPGITGLPGLNGVRGLPGASNLSGIPGDTGPAGPTGQPG
YPGPQGRPGVSSQPGVKGEPGPFGLPGIVGERGPPGDRGLQGFTGIPGYPGLKGQKGQQG
IIGNFGLPGFSGDTGPKGPKGDRGATGLQGAPGQPGLPPVPLHMKVDSGPVGAFGIVGPQ
GIQGDMGPRGPEGAKGVQGPQGKVGVPGIPGRSAAPGARGDLGSMGQRGPEGARGTSGVP
GSAGHPGMPGRSVNIGYLLVKHSQTDQEPMCPVGMAKLWSGYSLLYFEGQEKAHNQDLGL
AGSCLQRFSTMPFLYCNPGDVCYYASRNDKSYWLSTTAPLPMMPVVEDEIKPYISRCTVC
EAPAVAIAVHSQDSSIPFCPEGWRSLWIGYSFLMHTAAGDEGGGQSLSSPGSCLEDFRAT
PFIECNGARGTCHYFANKYSFWLTTIDDNFHSSPSSDTLKAGLIRTHISRCQVCMKYL
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atggaaacatctgaaaacaggaagagatgcctgcggttgcatccattatggaagcagaat
tttttgccatgggttctgctgctgattgtgctggtaatggggtttccaggaagtgtcgat
gctggtggaaagtcttacactgggccctgtggtggacgggactgcagtgaaggatgtcag
tgttttccagagaagggcagccgtggacaacctgggcaacttggtggacaaggtccccaa
gggccaccaggaatcataggaatagcaggcttacaaggacgtaaaggagacaaaggtgaa
agaggtcatccaggtatttctggaccgacaggagataagggccaaaacggtgtcacaggt
tttccaggagccaatggtgtacctggccacgttgggcaaggtggttcaagaggaaagcca
gggcatgatggctgcaatggtacaaaaggtgatgctggtgaggcaggcttccaaggccca
agaggacctttggggcctttgggtaacccaggtatcaaaggtcataaaggagaacccttc
tatatatcagaagacatgaaaaaaagaataagaggtgaacctggtgaacctggattagca
ggatacccaggtcccaatggtcagccaggtaaagtgggattcatcggtccaatgggtgaa
ctaggattacctgggccaccgggaccacctggatcaccaggaccaccaggcagcaaaggg
attggattttttggacagaagggagaaatgggtgacccaggcaagccagggcccccaggt
gttccatgccaaacacagggtgaacctggaacaacaggacccacaggtgcaccatgccac
ttagagcaggttaagccttctgatacttccataatagattacgtggctgaaaaaggtgaa
aaaggagagaggggggactatggagcaccaggggaacacatttcatcaggagagcgtgga
gaagaaggtattatgggcttccccggaacaaggggaccttctggaaatgatggtgcacct
ggagaaaaaggagaaaatggattgcctggactcaatggtaatcctggaaaacctggcttt
aaaggactgaagggagaagaaggagaaagaggtgctcctgggccaccaacctatgttaca
aatcttaaaacacagaaaggagaacaaggagatgcaggatttcctggtaatgttggtctt
gatggagaaactggagagaaaggaagtcctggccttccgggcttaaagggtttacccagc
tttttcccaggtcctccaggatctcctggattgaagggtgaaaaaggtcaaaaaggatat
caaggaaacccgggattacctgcttttcaaaaagggagatatggagaaccaggagagcct
ggcccaagaggacccaatggttttccagggtatccaggtgggcgcattggaagaaaaggt
gctaaaggatccccaggaaatgatggatcagatggatatcctggctttgctggtttaaaa
ggacttaaaggtgaacagggagaatgcaaatgttcagctggtgatgaagctacaaaggga
cctgctggggatccaggccccataggctttcctggccttactggcgaaattggtcctaaa
ggtgaaaaaggagacagaggaggtcctggtcttccaggtgctcctggtattaaggggctt
ccgggctttaatggtcttcctggtcctgtgggagagaaaggagacaaagtaaacgctacc
gaaaaaggtgcaaaaggtgagcgaggaacccctggcaccctaggtgctgtaggatttgaa
ggatttccaggaaaggacggattatatggtattcctggctcctcaggtcctcctggtgat
gctccaaaaggactaattggagagcctgggtttacaggttctccaggtcttgaaggagct
caaggtgagcctgggttaccaggtgtagcatttgcagggccaaagggtgcacgtggggct
cctggacagccagggagagatggatctccaggaattccaggacttcaaggtttaccagga
gactgctttaaggagcccggagaagacaatgaagtaggccaaagacctatatttccaggc
cgtgggtgcacattaactccaccaccagctccggcaggaacaagaggccctccaggatta
ccaggatttaacggtgtaagaggtgtaaaaggtcagataggtcaatcaggtgcagatgga
atgcatggatttaaaggagtcagaggtgacactggacctgatagcttgcctggtccacaa
ggattcccaggtcgaagaggagatcgtggtaagcctggaacaccaggtttaccaggagaa
cgtggtccatcaggaaatccaggtgcacagggatatcaaggtaaaaaaggtagccctggt
gatgtgctgggagctccatctggatcccgaggcgatgctggctggcctggcttttcaggc
ctgaaaggtgtacaaggcgacgcaggctttccaggatttcgaggtatcgatggaagccct
gggaccccaggactgaaaggtatttcaggtgatcctggaattcctggaactcctggatta
ccaggtccaccagggaatggtggttttccaggaatgccagggaaaccagggaagccagga
acagtgggtctctccggacttccaggttctcctggaccacgaggtgacgaaggagaacaa
ggaaacccaggacaaccttggaaaaaaggtgcagctggagatgaaggagaattgggaatt
actggcataagaggaagaattggagatccaggtttcccagggttgactggtatgggtgga
caccctggtgtaaagggagtgaaaggttctcctggaatggcaggtttccaaggaatgaag
ggcgagaaaggacagcctgccttagatggtcctaagggccagtatggcaattttggctta
ccaggagaaagaggaaatctaggagtatcaggaaacaaaggtgatcgaggggaggaggga
cctccaggaacacaaccaaaaatagaggaaggtatgctagacaagatgaagggagaaaaa
ggaaatttaggtgttactggatctccgggatttcctgggctaaatggaactaaaggaata
cctggccagcctggaattcctggacaagctggttcacctggaatgccaagctttgaaaaa
gggaataaaggagatgctggacaaagtggatttcttggttttcctggttccccaggacaa
gttggtcctccaggcattcgtggattcccaggatttacaggtcctagaggttcaaaaggc
atgcccggtttatatggaattccaggttacaaaggagatttaggagataaaggtgaaata
ggagactctatggatttaccaggacagagagggaataagggtgtgatgggtgaccatggg
tttcctggacaaaggggaatacatggagaaaagggattttcaggagatggaggttttcct
ggaattgaaggaatgagtggagatcctggacaaccaggacaaaaaggagaaagaggttta
cctggcttgttgggcatatctggaactcagggggatcctggatttccaggagtccatggt
gaaaagggaagttctggtatctttggtttaccgggtcaacaaggtttccctggattgaga
ggacgttctggacttgatggcttgaagggtacaaaggggcttcagggaccagcaggggtg
gatgtctttggtgtaagaggtattaaaggaactcctgggcaaaaaggtgatcagggagaa
cacagcaatctagctggacttcctggtaacacgggtggaacaggtgccaggggagagcca
ggtttaccaggcataactggtttgcctggattaaatggagttcgtggacttccaggtgca
tcaaatttgtccggaatcccaggagatactgggcctgcagggcctactggacagccaggc
tatccagggccgcaaggaagaccaggtgtgtcctctcaacctggtgtgaaaggagagcca
ggaccatttggattaccaggaattgttggtgagagaggacctcctggtgacagaggattg
caagggtttactgggattcctggttatcctgggttgaaaggtcagaaaggtcaacagggc
attattgggaactttggattacctggattttcaggagacacagggcctaaaggaccaaaa
ggtgacagaggggctacaggtctacagggtgctcctggacagccgggattacctccagta
cccctgcacatgaaagtggactcaggtcctgttggtgcgtttggaattgttggtccacaa
ggcattcaaggtgatatgggacctcggggtcctgaaggtgctaaaggtgttcagggtcca
cagggtaaagtaggagtacctggaatacctggaaggtctgctgcccctggtgcgagagga
gacctgggatcaatgggacaaagaggacctgaaggagctagaggaacttcaggtgtacct
ggtagtgctggacatccaggaatgccaggaagaagtgtgaacattggctatcttctagtg
aaacacagccagactgatcaagagccaatgtgtcctgtcggcatggccaaactatggagt
ggatacagtctattgtattttgaaggacaggagaaagcacacaatcaagacctaggtctc
gctggatcttgcttgcagcgcttcagcacaatgcctttcctgtactgcaacccaggtgat
gtgtgctactacgccagccgtaatgataaatcctattggctgtcaaccactgctcctctt
ccaatgatgcctgtggttgaagatgaaatcaagccttacataagtcgttgtacggtctgt
gaggctcctgcagtagcaattgctgttcacagccaagatagctccatcccgttctgtcca
gagggctggcgaagcttgtggattggatattcatttcttatgcatacagccgcaggtgac
gagggaggaggacagtccctttcttctcctggtagctgcctggaagactttagagcgact
ccattcattgagtgcaatggtgcccgtgggacctgccactattttgccaacaagtacagc
ttctggcttaccactattgacgacaacttccatagctctccgtcttcagatacactgaaa
gctggcctgattagaactcatatcagtcgctgtcaagtttgcatgaaatacctgtaa
DBGET
integrated database retrieval system
