Aquarana catesbeiana (American bullfrog): 141127746
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Entry
141127746 CDS
T11018
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein
KO
K12200
programmed cell death 6-interacting protein
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03250
Viral life cycle - HIV-1
acat03272
Virion - Hepatitis viruses
acat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
141127746 (PDCD6IP)
03272 Virion - Hepatitis viruses
141127746 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141127746 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acat04131
]
141127746 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acat04147
]
141127746 (PDCD6IP)
Membrane trafficking [BR:
acat04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
141127746 (PDCD6IP)
Exosome [BR:
acat04147
]
Exosomal proteins
Proteins found in most exosomes
141127746 (PDCD6IP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
T2SSM
HbrB
TPD
Motif
Other DBs
NCBI-GeneID:
141127746
NCBI-ProteinID:
XP_073470597
LinkDB
All DBs
Position
LG02:289735863..289739030
Genome browser
AA seq
865 aa
AA seq
DB search
MATFISVPLKKSSEVDLVKPLSKFIQNTYPAGEEQAEYCRAVDELNKLRKSAVGRPLDKH
ESSLETVMRYYDQLSSIEPKFPFSEGQLCLTFTWKDAFDKGSLFGGSVKLGLASLGYEKT
CVLFNIGALASQIASEQNLDNDEALKAASRYYQLASGAFAHIKDTVLSALSRDPTVDISP
DTVGTLSVIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADFYGDAYKQCQYKDALPKEV
YPVLAAKHCIMQAYAEYHQSVMAKQQKKFGEEIGRLQHAADLVKTVNSRYDEYVSVKDLS
DKIQRALTAAKKDNDFIYHDRVPDLKDLDPVGKAALVKPTPVAVPLSQKYTDLFQKMVPL
AVQQSLSIYNQRRGDLINTTIARMRDATTLCNGVLASLNLPAAIEDMSGDTVPQSILQKS
KAVIEQGGIQTIDQLIRDLPELLQRNREILDESLKFLDEEEVTDNDLKSKFKERWQRTPS
TELYKPLRVEGSNLSNVLDKAIHADAVVKERYQSQREAIATLCKPEAELNAAIPSANPAK
TMQGSEVVNTLKSLLAQLDEIKKEREQLETDIKSVNFDMATKFLTALAQDGAINEEALSV
TELDRIYGGYTDRVQRNLTKQEEIISNIQVSHQEFSKMKQSNSEANLREEVLKKLAAGHD
SYVELVANLREGTKFYNDLTEILLKFQGKCSDIVFARKTERDELLKDLQQSIAREPSAPS
MPAVPSYQNAASTTPATGTSSMPTPAPRTVYPAKQPPPRPPPPSAPASVPVSAAQNVAPP
IANASVPVPSQPVSSTIPSQAQGPPFATYPGYSGYYGMPMPGYNPYMYGQTMPPYLYQPQ
SGQAPYPTQQAGFPMPQPPYYQPPQ
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtttatctcggtgccgctaaagaagtcgtccgaagtggacctggtgaagccg
ctgtctaagttcatccagaacacgtacccggccggggaggagcaggccgagtactgccgg
gcggtagacgagctgaacaagctgaggaagagcgcggtgggccggcctctagataaacat
gagagctctctggagaccgtcatgcgttattatgaccagctgagctccatcgagcccaag
ttcccgttctctgaaggccagctgtgcctcaccttcacctggaaagacgcctttgataag
ggctccctgtttggcggctctgtcaagctaggcctggccagcctgggctatgagaagacc
tgtgtcctcttcaacatcggggccctggccagccagattgcctctgagcagaacctggac
aacgatgaagccctgaaggccgcctccaggtactaccaactggccagcggggccttcgcc
cacatcaaagacaccgtgctgtccgccctcagccgagaccccaccgtagacatctccccg
gacaccgtgggcaccctcagcgtcatcatgctggcccaggcccaggaggtcttcttctta
aaggccacccgagacaagatgaaagacgccatcatcgccaagctggccaaccaggcggct
gacttctacggagatgcctacaagcagtgccagtacaaagatgctctgcccaaagaggtg
tacccggtgctggccgctaagcactgcatcatgcaggcctacgctgagtaccaccagtct
gtcatggccaaacagcagaagaagttcggggaggagatcggcaggctgcagcacgccgcc
gacctggtcaaaaccgtcaattccaggtacgacgaatacgtcagtgtcaaagatctgtcc
gacaaaatacagcgcgcgctcactgccgcaaaaaaagacaacgacttcatttaccatgac
agggtgcccgatttaaaagacctggatcctgtgggcaaagcagcattggtcaagccaact
cctgtcgcggtccctctgagtcagaagtacaccgatctctttcaaaaaatggtaccgcta
gctgtccagcagtctttgagtatttataaccagaggaggggcgatctaatcaacacaacc
attgccagaatgagagatgccacgaccttgtgtaacggcgttctggcctctctgaatctt
ccagcggccattgaagatatgtctggtgacactgtaccccaatcaattctacaaaagtcc
aaggctgtcattgagcagggtggcattcagactattgaccagctgatcagagacctgcct
gagcttctgcagagaaatagagaaattctggatgagtcactcaagtttttggatgaagaa
gaagtgaccgataatgacttaaaatccaagttcaaggaaagatggcaaagaacaccttcc
actgagctctataaacccctgagagtggagggcagcaatctcagtaacgtgttggacaaa
gccatccacgctgatgctgttgtaaaagagcgctaccagtctcagagagaagctatagcc
acattatgtaagcctgaagctgagctcaatgcagccatcccatctgcgaaccctgcaaaa
actatgcagggcagtgaagtggtgaacaccttgaaatccttgttggcccagttggacgag
ataaagaaggaaagagagcagcttgaaactgacattaaatcggtcaactttgacatggca
accaaatttctcaccgctctggcacaggatggtgccattaacgaagaggccttatctgtg
accgaactcgatcggatctatggaggctacaccgacagagtacagagaaatctgactaaa
caagaggaaataatcagcaatatccaagtttcccaccaggagttttccaaaatgaaacaa
tcaaacagcgaagctaatctgagagaagaggtcctgaagaaattggctgcaggacatgac
agctatgtggaacttgttgctaaccttagagaaggaactaagttctataatgaccttaca
gaaattttgctgaagttccaaggcaagtgcagtgatattgttttcgcccgaaagacagaa
agagatgagttgctgaaagatttgcagcaaagcattgccagagagccaagtgcaccatcc
atgccggcagtaccaagttatcaaaatgccgcctctacaactcctgctactggtacatca
agtatgccaactccggcaccaaggactgtctatcctgctaaacaacctccaccacgtcct
cctccaccttcagctcctgcaagtgtccctgttagtgcagcacagaatgttgctcctcca
atagcaaatgcctcagttccagtgccctcgcagcctgtttccagcaccattccatcacag
gcacagggtcccccatttgcaacctaccccggatattcagggtattatggaatgcccatg
cctggctataatccatacatgtatggccaaaccatgcctccttatctataccaaccacag
tcaggtcaggcaccttacccaacacagcaggctggcttcccaatgccacagccaccttat
taccagccacctcagtag
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