Aquarana catesbeiana (American bullfrog): 141127884
Help
Entry
141127884 CDS
T11018
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04148
Efferocytosis
Brite
Membrane trafficking [BR:
acat04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
141127884 (TGFBRAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
Mst1_SARAH
zf-RING_16
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
141127884
NCBI-ProteinID:
XP_073470850
LinkDB
All DBs
Position
LG02:315544997..315597134
Genome browser
AA seq
870 aa
AA seq
DB search
MSVQAFRLVCASGKDHLPAGIQIECLESSGHDLYIGSSDGCIHHLLLVEVNGTESAGLPL
GQQSDYPNTSFTTSRQNQRQLGVKKPICELKASSALGRLLVLCDNTIFLLCNDSLEPVPG
TKIRGVLSFTLNENPVSGDPFSVEVCLISSKKRTVQIFSVGQERVQIVREVSTPEQPCSL
AADGYYLCLALSSRYVILNYNTGHCQDLFPYPSEQKRPIIKRISRQEFLLAGPGGLGMFA
TVAGISQRAPVRWSENVIGAAVSFPYVLALDEEFITVHSMLDQQQKQSLPFKEGVILQDF
EGRVIVATTNGVYVLIPLPLEKQIQDLLSNQRVEEALVLTKGARRNIPKEKFQVMNRRIL
QQAGFIQFAQLQFLEAKELFRTSHLDIRELISLYPLLLPSSSGFIRAHPPLHEYADLNQL
TRGDQEKVSKCKRFLMSYLSEIRSTEVANGYQQDVDTALLKLYAEADHESLLDLLVSDNA
CEVGDSAAWLEKHKKYFALGLLYHYNKQDAAALQIWVRIVNGDLEDNTRTDLFEYVVDFL
TFSKDQQLVWQYVDWVLQKSEQIGVQIFTKRSLDEQLQNGFCPDKIVSHLCKYRRALLLY
LEHLVMDRMIQKEKYHTHLAVLYLEEILRLNSMDSSDHTELEELRQRFQSLLRQSNLYRV
LFLLDKIKDTDMHMERAILHGKLEEHDQALDILVHHLKDFSAAESYCMWNSEGREAPYRK
RLFQLLLSSYLSPSTPANTLTVAAVDLLNNHPTEFDAATVLHLLPQEWSVQLLCPFLAGA
MREHVHSLRMSQVAVGLARAENIIYKKEKLNMKEKPVILSEKKLCHMCRKPFQEPVFARQ
PNGHIVHAHCATNQHVNSSIDHVPSQSKRT
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgcaggcattcagattggtgtgtgcatctgggaaggatcacctccctgctggg
atacagattgagtgcttggagagctctggacatgatctgtacattggcagcagtgatggc
tgcattcaccatcttctgctggtggaagtaaatggcacagagtcagctggacttcctctg
ggtcagcagtcggattatcctaacactagttttactaccagccgacaaaaccagagacag
ctaggtgtaaagaaaccaatatgtgaattgaaagcctcctctgcccttggccggttactt
gtgctgtgtgataatacgattttcttgctgtgcaatgactctctggagccagtaccaggg
actaagatcaggggtgttctcagcttcaccctaaatgagaatccagtaagcggagacccg
ttcagtgtagaggtttgcttgatctcctccaagaaacgcacggtgcagatcttcagtgtg
ggacaggagcgggtacagatagttcgagaagtgtctacgcctgaacagccatgttctctt
gctgctgatggatattatctgtgcctggcgctcagcagtcgttatgtcatcttaaattat
aatacagggcattgccaggatctctttccttatcccagcgagcagaaaagaccaattatt
aagagaatcagcagacaggagtttctgttggcagggcctggaggattagggatgttcgcc
acagtagcagggatctcacagcgtgctccagttcgatggtctgagaatgtaattggagct
gcagtgtctttcccttatgtgctggctttagatgaagaattcatcacagtgcacagcatg
ctggaccaacagcagaaacaaagcctgccctttaaagaaggtgttatcctgcaagatttt
gaagggcgtgtgattgtagcaactacaaatggtgtgtatgttttaattcccttacctttg
gagaaacagattcaggatctactatcaaaccagagggtagaagaagcacttgttctaact
aaaggagcacggcgcaatattccaaaggagaaatttcaggttatgaacagaagaatcctg
caacaggctggatttatacagtttgctcagcttcagtttttagaagcaaaagaattattc
agaactagtcacttagatatccgggagttgatttctctctatcctctcctgctgccatca
tcctctggatttatccgcgcacatcctcctctgcacgaatatgcggatcttaaccagctc
acccgaggagaccaggagaaggtttcaaagtgcaaacgtttcctcatgtcttatttaagt
gaaatccgcagcaccgaggtggctaatggctatcagcaggatgtggacacggccttactg
aaactttatgcagaggcagatcacgagagcctgctagatctgctggtgtcagacaatgct
tgtgaagtgggagatagtgcagcatggctggaaaagcacaaaaagtattttgcacttggc
ctactgtatcactataacaagcaagacgctgccgctcttcagatctgggttagaatagtg
aacggtgacctggaagacaacactcggacagatctgtttgagtatgtggtagattttctg
accttttccaaagaccagcagttggtgtggcagtatgtggattgggttttgcagaaaagt
gagcagattggggtccagatcttcacaaaacgttctttagacgaacagttgcagaatggc
ttctgtccagataaaattgtgagccacctgtgcaagtaccgacgggctttgctcctctac
ttggaacatttagtcatggataggatgatccagaaggaaaagtatcacacacacttggct
gtgctataccttgaagaaatcttacgactaaactctatggactcatcagatcacactgaa
ctggaggagctgcgtcagagatttcaaagccttctgcggcagtcaaacctttatcgggtc
ctcttcctcttagataaaatcaaagacacagatatgcatatggagcgagcaatattacat
gggaaactggaagagcacgatcaagcattggatatcttagttcatcatttaaaagacttt
tctgcagctgagagttattgtatgtggaactctgagggcagggaggctccttatcgcaag
agactttttcagctccttctttcctcctacctcagtccgtccacacctgccaacactttg
acagtggctgctgtagacttgttgaataatcaccctaccgaatttgatgctgccactgtt
ttgcatcttttgccacaagaatggtctgttcagcttctttgcccattcctggcaggggcc
atgagggaacatgttcattctttaaggatgtcacaggtggcggtaggattagcaagggca
gagaacatcatctataaaaaggagaagttgaacatgaaggaaaagccggtaattctgtca
gagaagaagctttgccacatgtgccggaagccattccaagaaccggtatttgccagacag
cccaacggtcacattgttcatgcccactgtgctaccaaccagcacgtcaacagcagcatt
gaccatgtacccagtcaaagcaaaagaacatga
DBGET
integrated database retrieval system
