Aquarana catesbeiana (American bullfrog): 141128063
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Entry
141128063 CDS
T11018
Symbol
LIG3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
141128063 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acat03400
]
141128063 (LIG3)
Enzymes [BR:
acat01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
141128063 (LIG3)
DNA repair and recombination proteins [BR:
acat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
141128063 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
RNA_ligase
BRCT_2
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
141128063
NCBI-ProteinID:
XP_073471225
LinkDB
All DBs
Position
LG02:378194393..378243423
Genome browser
AA seq
985 aa
AA seq
DB search
MKGLFKLLLQTARTLSPLSSRSISNTTTPFLHYCSRLPRLHTLQLDFAIRISGCHNMAEQ
RYCVEYAKRGTAGCKKCKEKIAKGMARIGKIVPNPFSESAGDMKEWYHIKCMFEKLERAR
ATTKKIDDLTELEGWQELQDAERELINQHVNELAAKTGAAPTPRKKTPSKANQPPTAPSA
SPSKMPAPSPSPLKFSGFSAKPEPSSASSSSSGSSLSAEKCDTKHKDCLLREFRKVCAMV
AEQPSYNSKTQIIQDFLTKGTSGDGFHGDTFLTVKLLLPGVIKSVYNLNDKQIVKLFSRI
FNCNLEKMVSDLEQGDVSETVRIFFEESKTFPPAAKSLLTIQEVDDLLNQLSKMTKEEDQ
QKVLEDIACRCTSNDLKCIIRLIKHDLKMNAGAKHVLDALDPNAYDAFKASRNLGDVVER
VLQNQQQAPGMKRTLSVKATLMTPVQPMLAEACKSVEYAMKKCPNGMYAEIKYDGERVQV
HKNGDHFSYFSRSLKPVLPHKVAHFKDYIPKAFPGGNSIILDSEVLLIDTKTGKPLPFGT
LGVHKKAAFLDANVCLFVFDCIYFNGVNLMDRPLIERRKFMRENMVEIPNHILFSEMKHV
TKASDLADMITRVIREGLEGLVLKDVKSIYEPGKRHWLKVKKDYLNEGAMADTADLAVLG
AFYGKGANGGIMSIFLMGCYDTESGKWCTVTKCSSGYDDATLARLQKELDMVKISKDPSK
IPSWLKINKNYYPDFIIRDPENAPIWEITGAEFSKAEAHTAGGISIRFPRCTRFRDDKDW
KTATTLQQLKELYEVSKETSDFTVAATSSQDEEGSSESSSRDNEGNSRPPTPSGSVKKPK
TSSSKSPGKDKRNDSGKIPQPKKKDEPAKAEKRKIVSPPSVDSKKAKLSSASNGNGHSVA
QPSSTTKTLLDIFTGVRLYLPASLEEFSKLRRYFVAYDGDLVPEFDVPSATHVMGDVPEC
AEDAKHVTPRWIWECIKRRRLVAPC
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggattatttaaacttttacttcaaacggcaaggacactttcgccactgtcgtca
aggagcatttcaaacactactactccctttcttcattactgctcaagattgcctcgtctc
cataccttacagctagactttgctataagaatcagtggctgccacaacatggcagagcag
cgatattgtgtagaatatgccaagcgtgggactgcaggctgcaagaaatgcaaagaaaag
atagcaaaaggcatggcacgaattggaaaaatagttccaaatccttttagtgaatcagca
ggagatatgaaggagtggtaccatatcaagtgcatgtttgagaagttggagcgtgcacgg
gcaaccacaaagaagattgatgacctcacagagcttgaaggctggcaagagctacaggat
gctgaaagagaactgatcaatcagcacgtgaacgaacttgctgctaaaactggagctgca
ccaacacctcgcaaaaagactccttcaaaagccaatcaacccccaacagcaccaagtgca
tctccatcaaaaatgcctgcaccaagcccttcacctttgaagttttctgggttttcagca
aagcctgaaccctcatctgcatccagttccagtagtgggtcaagtctctctgccgaaaaa
tgtgatacaaaacacaaggactgcctactgcgtgaattccgcaaagtgtgtgccatggtt
gcagagcagccaagctataattccaagacccagatcattcaggatttcctaacaaagggg
accagtggagatggtttccatggagatacattcttgacagtaaaactactgctaccaggt
gttatcaagagtgtgtacaacctcaacgataaacaaattgtcaagctctttagtcgtata
ttcaactgcaacctagagaaaatggttagcgaccttgagcagggagatgtttccgagact
gttcggattttctttgaagaaagtaaaacgtttccaccagctgctaagagtctcttgaca
attcaagaagtagatgacctgctgaaccaactttctaaaatgaccaaagaagaagaccag
cagaaagtactggaggacatcgcatgcagatgtactagtaatgatctgaagtgcatcatt
cggctaatcaagcacgatttgaaaatgaatgcaggagccaaacatgtacttgatgctctt
gatcctaatgcatatgatgcattcaaagcttctcgcaatttgggagatgtggtggaacgt
gtgctacaaaaccagcagcaggcaccaggcatgaaacgcacactaagcgtaaaagctacg
cttatgacgcctgttcaacctatgttggctgaagcctgcaaatctgtggagtatgctatg
aagaaatgtccaaatggaatgtatgcagagataaagtacgatggagaacgggtccaagtg
cacaaaaatggtgatcacttcagctattttagccgtagcctgaagccagttcttccccac
aaggttgctcatttcaaagactatatacccaaagcattccctggtggaaatagcattatc
ttggactctgaagtgcttcttattgataccaagactggcaaaccccttccatttggaacc
ttaggcgttcacaagaaagctgctttcctggatgccaatgtatgcctctttgttttcgac
tgcatatatttcaatggagttaacttaatggacaggccattgattgagagacgaaagttt
atgcgtgaaaatatggtagaaatccccaaccatattctgttctcagaaatgaaacatgtc
acgaaagcatcagatttggcagacatgataactcgagtaatcagggaaggtttagaaggc
cttgtgctaaaagatgtaaagtcaatttatgagccaggaaaacgtcactggctgaaggtc
aaaaaggattatttgaatgaaggcgctatggctgacactgctgatcttgcagttttggga
gcgttttatggaaaaggagcaaatggtggtataatgtctatattccttatgggatgttat
gacacagaaagtggcaagtggtgcacagtgacaaaatgctcaagtggttatgatgatgcg
acgcttgcccgtttacagaaggagctggatatggtcaagatcagcaaggatccgtctaaa
attccttcgtggctgaaaatcaacaagaactattacccagacttcataattcgggatcct
gagaatgcccctatctgggagatcacaggagcagagttctctaaggcagaggcccacaca
gctggtggaatttctattcgttttccacgttgcacccgcttccgtgatgacaaagactgg
aaaacggccaccactttacagcagctaaaggaactttatgaggtctcgaaggagacatcc
gatttcacggttgctgcaacatcatctcaggacgaggaaggctcttctgagagcagcagt
cgagacaatgaaggcaattccagaccacctacgccaagtggctctgtaaagaagccaaaa
acctcaagttctaaatcacctggcaaagataaaagaaatgatagtggcaaaattccccaa
ccaaagaaaaaagatgaaccagctaaagcagagaagaggaaaattgtatcgcctccgtct
gttgacagtaaaaaggcaaaactctccagtgctagtaatgggaatgggcatagtgtggca
cagccatcatccaccactaaaacccttctggatatattcacaggagtgaggctttatctg
cctgcttcgcttgaggaattttcaaaattgcgccgctacttcgttgcctatgacggtgat
ctcgtcccagaatttgatgttccttctgccactcatgtgatgggtgatgttcctgaatgt
gctgaggatgccaaacatgtgacaccacgctggatatgggaatgcattaaacgcaggagg
ctagtagcgccttgctga
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