KEGG   Aquarana catesbeiana (American bullfrog): 141128214
Entry
141128214         CDS       T11018                                 
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
acat  Aquarana catesbeiana (American bullfrog)
Pathway
acat03082  ATP-dependent chromatin remodeling
acat03083  Polycomb repressive complex
acat04110  Cell cycle
acat04330  Notch signaling pathway
acat04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:acat00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    141128214 (HDAC1)
   03083 Polycomb repressive complex
    141128214 (HDAC1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    141128214 (HDAC1)
   04350 TGF-beta signaling pathway
    141128214 (HDAC1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    141128214 (HDAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:acat03036]
    141128214 (HDAC1)
Enzymes [BR:acat01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     141128214 (HDAC1)
Chromosome and associated proteins [BR:acat03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     141128214 (HDAC1)
   HDAC complexes
    Sin3A-HDAC complex
     141128214 (HDAC1)
    BRAF-HDAC complex
     141128214 (HDAC1)
    REST complex
     141128214 (HDAC1)
    SHIP complex
     141128214 (HDAC1)
    MiDAC complex
     141128214 (HDAC1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     141128214 (HDAC1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    141128214 (HDAC1)
  Chromatin remodeling factors
   NuRD complex
    141128214 (HDAC1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 141128214
NCBI-ProteinID: XP_073471469
LinkDB
Position
LG02:complement(405828067..405891214)
AA seq 480 aa
MAYTQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAS
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
SVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMTKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEFMKTFNLPLLMLGG
GGYTIRNVARCWTFETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAVQDDSGDEDDDDPDKRISIRSSDKRIACDEEF
SDSEDEGEGGRRNLANFKKVKRAKTEDEKDGEEKKDLKEDDKLKEEKPEVKRVKEETKTA
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggcgtacacacaaggaacaaagaagaaagtgtgctattactatgatggtgatgttggt
aattattattatgggcaggggcatccaatgaaaccccacaggatcagaatgacccacaat
ctgcttcttaattatggattgtacaggaagatggaaatctatagaccgcacaaagccagt
gctgaagaaatgacaaaatatcacagtgacgattacattaaatttctgcgttccatccgg
ccagacaacatgtctgaatacagcaaacagatgcaaagatttaatgtcggagaagactgt
cctgtgtttgatggactctttgaattctgccaattgtcaacaggaggatctgttgcaagc
tctgttaaactaaacaagcagcaaacggacattgccgtaaactgggcaggtggacttcat
catgccaagaaatctgaggcatctggcttttgctacgtcaatgacatagtgcttgccatt
ctggaacttcttaagtatcatcagagagtactgtacattgatattgatattcatcatggt
gatggcgtggaagaagctttttacaccacagacagagtcatgactgtttcttttcataaa
tatggagaatattttccagggactggggacctgagggatattggggctggaaaaggtaaa
tactatgcagtaaactacccattgcgagatggaattgatgatgaatcctatgaagccata
tttaaaccagtcatgactaaggttatggaaatgtaccagcctagtgctgttgtcctgcag
tgtggtgcagattcactttctggggacagacttgggtgctttaatctaactatcaaagga
catgccaagtgtgtggagtttatgaagaccttcaatctaccattgctgatgctgggtggt
ggtggctacaccattagaaatgttgcccgctgttggacattcgagacagctgtggctctg
gacacagaaatacccaatgagcttccatacaatgactactttgaatattttggccctgac
tttaaacttcacatcagcccttctaatatgacaaaccagaatacaaatgagtacctggaa
aagatcaagcagcgactgtttgagaatctacggatgcttccccatgcgcctggtgtgcag
atgcaggcgatccccgaggatgctgtgcaggatgatagtggtgatgaagatgatgatgat
cctgacaaacgtatttccattcgatcctcagataagagaattgcatgtgatgaggaattt
tcagattcagaggatgagggtgagggaggacgtaggaatcttgccaatttcaagaaagta
aagcgtgccaaaacagaggatgaaaaagatggcgaagagaagaaagatctcaaggaggat
gacaagctaaaagaagagaaaccagaagttaaacgggtaaaagaagagaccaaaactgcc
tga

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