Aquarana catesbeiana (American bullfrog): 141128956
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Entry
141128956 CDS
T11018
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03030
DNA replication
acat03420
Nucleotide excision repair
acat03430
Mismatch repair
acat03440
Homologous recombination
acat03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141128956 (RPA1)
03420 Nucleotide excision repair
141128956 (RPA1)
03430 Mismatch repair
141128956 (RPA1)
03440 Homologous recombination
141128956 (RPA1)
03460 Fanconi anemia pathway
141128956 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acat03000
]
141128956 (RPA1)
03032 DNA replication proteins [BR:
acat03032
]
141128956 (RPA1)
03400 DNA repair and recombination proteins [BR:
acat03400
]
141128956 (RPA1)
Transcription factors [BR:
acat03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
141128956 (RPA1)
DNA replication proteins [BR:
acat03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
141128956 (RPA1)
DNA repair and recombination proteins [BR:
acat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
141128956 (RPA1)
MMR (mismatch excision repair)
141128956 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
141128956 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
141128956
NCBI-ProteinID:
XP_073472721
LinkDB
All DBs
Position
LG02:complement(664678289..664829187)
Genome browser
AA seq
611 aa
AA seq
DB search
MALPKLSEGSIAGILQGETSLHPILQVINIRPINTATGPPRFRLLMSDGLNTLSSFMLAT
QLNTLVDRNLLAANCICKVSRYIVNNLKDGRRVVIVMEMEVLKEADSVNGKIGNPQPYND
GQTATAPAAPTAPAAPAPVPVQSKPVQNSAPPPFMNRGVSKTFGGGGIFSTPGGSQAKVV
PIASLNPYQSKWTIRARVTNKGQIRTWSNSRGEGKLFSIEMVDESGEIRATAFNEQADKF
FSIIEINKVYYFSKGTLKIANKQYTAVKNDYEMTFNSETSVIPCDDSSDVPTVQFDFVPI
SELENKNKDTLLDIIGVCKSFDEVTKVTIKSNNREVSRRNIYLMDTSGKMVSTTLWGEDA
DKFDGSRLPVVAIKGARLSDFGGRSLSVLSSSTVMINPDIPEAFKLRGWFDSEGQSLEGT
SISESRGSGGGNTNWKSLLEVKTENLGHGEKADYFTSVATIVYLRKENCMYQACPSQDCN
KKVIDQQNGLFRCEKCDKEFPNFKYRLILSANIADFGENQWVTCFQEAAESILGQNAMYL
GELKEKNEQAFEEVFQNANFRSYTFRIRVKLETYNDESRIKATAMDVKPVDHKEYSRRLI
MNIRKLAAQGV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcactacccaaactcagcgagggctccattgcgggtattctgcaaggggagacttca
ttacatcctattttgcaagtcattaacattcgtccaatcaacactgctacgggtcctcct
cgattcagattgctgatgagtgatgggttaaacacactttcatctttcatgttggctacc
cagttaaacactcttgtggatagaaatctccttgcagcgaactgtatctgtaaggtctcc
cggtacattgtgaacaaccttaaagatggaagacgcgtggtcatagtaatggagatggaa
gtactgaaggaagcagattcggttaatgggaagattgggaatccgcaaccatacaatgat
ggtcagacagcaacagctccagcagctccaacagctccagcagctccagctcctgtacct
gtacagagtaaaccagttcagaactcggctccccctccttttatgaacagaggagtatct
aaaacctttggcgggggaggtatttttagtacccccggtggatcacaagcaaaggtggtg
ccaattgccagtctaaacccataccagtcaaagtggactatacgtgctcgagttaccaac
aaaggtcagattcgcacttggagcaactctcgaggggaggggaagctgttttctatcgag
atggtggatgagagtggcgagatccgtgctactgcttttaacgagcaagccgacaagttt
ttttcaattattgaaataaataaggtatattacttctcaaaaggaactttaaagattgct
aacaaacagtatacagctgtaaagaatgactatgaaatgacgttcaatagcgaaacttct
gttatcccgtgtgatgactcctctgatgtcccgacggtgcagtttgattttgttcccatt
tctgagttggaaaacaaaaacaaggacacgctactagacattattggggtttgtaagagt
tttgacgaggttaccaaggtgactataaaatccaacaaccgcgaagtctcaaggcgaaat
atttatttaatggacacgtcgggcaagatggtctcaactactttgtggggtgaagatgca
gataaattcgatggctccagactacctgttgtggcaatcaaaggagcacggctgtctgac
tttggagggcggtctttgtcagtcttgtcatctagtactgtcatgatcaatccagatatt
cctgaggcgttcaagctcagaggatggtttgattcagagggccagtcattagaaggcaca
tcaatctcagagtctcgtggtagtggaggaggaaataccaactggaagtcccttctggaa
gtgaagactgagaatctgggacatggtgaaaaagctgattattttactagtgttgccacc
attgtgtatcttcggaaggagaattgcatgtatcaggcgtgcccttcacaggattgcaat
aagaaagtcatagaccagcagaacggcctctttcgctgtgaaaagtgtgacaaggaattt
cccaactttaagtatcgcctcattctgtcagcaaacattgcagactttggggagaatcag
tgggttacatgcttccaggaagcagctgaatcaattcttggccagaatgccatgtacttg
ggggaactcaaggaaaagaatgaacaagcttttgaggaggtgtttcagaatgccaatttc
cgttcctacacctttagaattcgggtgaagttggaaacatacaatgatgaatctcgtatc
aaagccacagctatggatgtaaaaccagttgatcacaaagaatactcaaggcgccttata
atgaacatccggaagctggctgctcagggagtctga
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