Aquarana catesbeiana (American bullfrog): 141128965
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Entry
141128965 CDS
T11018
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141128965 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acat03041
]
141128965 (PRPF8)
Spliceosome [BR:
acat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
141128965 (PRPF8)
Complex C
U5 SnRNP specific factors
141128965 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
141128965
NCBI-ProteinID:
XP_073472732
LinkDB
All DBs
Position
LG02:666684089..666721901
Genome browser
AA seq
2335 aa
AA seq
DB search
MAGVFPYRPGVPPMPGPPPIAPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDNEEDAPVMDWFYDHQPLRDNRKYVNGTTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEYVEPFLKETPLYTDNTANGIALLWAPRPFNLRSGRTRR
AVDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLSDGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWDTTEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDVATE
AAHPIRLYCRYIDRIHIFFRFSADDARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGGKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
NQLPQHEYLKEMEPLGWVHTQPNESPQLSPQDVTTHAKIMADNPAWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQASWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDMYS
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggctggggtgtttccatacagacctggggttccccccatgcctggcccaccaccaata
gcgccagattacatgtctgaagaaaagttacaggagaaagctcgcaaatggcaacaactg
caggccaaacgttatgcagagaaaaggaaatttggctttgtggatgctcagaaagaagac
atgcccccagagcacgtgcgcaaaatcattcgtgaccatggtgacatgacaaacaggaag
ttccgtcatgataagagggtctaccttggagctctgaagtacatgccacatgcagtgctg
aaattactagaaaacatgcccatgccttgggagcagattagagatgtgccagtgttgtat
catattactggagctatttcttttgtcaatgagatcccttgggttatagaacctgtttac
atagcacaatgggggtcaatgtggatcatgatgaggagagaaaagcgagacagacgtcat
ttcaagaggatgagatttcccccctttgatgatgaagagccacctctggattatgctgat
aacattcttgatgtggagcccctggaggctatccagctggagctggacaacgaagaggat
gctccagtcatggactggttctatgatcaccagcccctaagagacaacagaaagtatgtg
aatgggacaacataccaacgttggcaattcacgcttcctatgatgtcgactctgtaccga
ctggccaatcagctgctcacagatcttgttgatgacaactacttttacctgtttgatttg
aaagcttttttcacatctaaggctttaaacatggcaattccaggtgggccaaaatttgag
ccattggttcgcgatataaatttgcaggatgaggattggaatgagttcaatgatattaac
aaaatcattattcgccagccaattcgcacagagtacaaaatcgcatttccgtatctgtac
aacaatctccctcatcatgtgcatctgacatggtaccatactccaaatgtggttttcatt
aaaacagaggatcctgatcttccagctttttattttgatcctcttatcaaccccatatca
catagacattctgtaaagagtcaggagcctttaccagatgatgatgaagagtttgagtta
ccagaatatgtggagccattcctcaaggaaactcctctttatacagacaacacagccaat
ggcatagccctgctttgggcgcctcgcccgttcaacctgaggtctggtagaacacgaagg
gctgttgacatacctctggtgaagaactggtaccgggagcattgtccagctggtcagcct
gttaaagttcgcgtctcctaccagaaactgctgaagtactatgtccttaatgctcttaaa
catagaccacctaaggcccagaaaaaaaggtatctattccgctcattcaaagctacaaag
tttttccaatccactaagctggactgggtggaggttggacttcaggtttgtcgccaaggc
tacaacatgctgaacttgctgatccacagaaagaacttgaattaccttcacttggactac
aatttcaatttgaaacctgtaaaaacactcaccaccaaggagcgtaagaagtctcgattt
ggcaatgcctttcatttgtgccgagaggttcttcgtctgaccaaactggtggtggatagt
catgtgcagtataggcttggtaacgtggatgccttccagttatcagatggacttcagtac
atctttgcccacgtgggccagctgactggcatgtacagatacaagtacaaacttatgaga
cagatccgaatgtgcaaagacttgaaacacttaatctattacaggtttaacacaggtcca
gtgggaaaaggaccaggttgtggcttttgggcagctgggtggagagtttggcttttcttt
atgcgtggcatcaccccgttgctggagaggtggcttggaaatcttctggctagacagttt
gaaggtcgtcattccaagggggtagcaaaaacagtgacgaagcagagagtggaatctcac
tttgatcttgagctgagagcagccgtcatgcatgacattttggacatgatgccagagggt
atcaagcagaataaagcaaggactatcctgcaacacttgagtgaagcctggagatgctgg
aaggcaaacattccctggaaggtaccaggtcttcctacacctattgagaacatgattctc
cggtatgtaaaagcaaaggctgattggtggacaaacactgcccattacaacagagagcgt
attcgccgtggtgcaactgtggacaaaaccgtgtgtaagaagaacctgggccgcttgact
cgtctgtacctgaaggctgagcaagaaagacagcacaactacctaaaggatgggccctac
atcactgctgaagaggctgtagcagtatacaccaccacagtgcactggctggaaagcaga
aggttctctcctataccattccctcctctttcctacaaacatgatactaaactgctcatc
ctggctcttgagagactgaaggaagcatacagtgtgaagtcccgtttaaatcagtctcaa
agagaagagttgggattgattgaacaagcgtatgacaatccccacgaagctttgtccaga
atcaagcgtcacttgctcactcaaagagctttcaaggaggtgggaatagagttcatggat
ctttacagtcacctagtccctgtctatgatgttgagcctctcgagaagatcactgatgct
tacctggatcaatatctgtggtatgaagcagacaagaggcgactcttccctccttggatc
aaacctgcagacacagaaccccctcctttacttgtgtacaagtggtgccaaggcatcaac
aatttacaggatgtgtgggacactactgaaggagaatgcaatgtaatgctggagtctcgg
tttgagaagatgtatgaaaagatcgatttgactctgctgaatcgtcttctgcgtctaatt
gtcgatcacaacattgctgattacatgacagccaaaaacaacgttgtgatcaattacaaa
gacatgaatcacacaaactcctatggcattattcgaggactccagtttgcttctttcatt
gttcagtattatggtctggtgatggatctgttagtcctaggtttgcacagggccagtgag
atggctggcccacctcaaatgccaaatgatttcttgagtttccaagatgtggccacagaa
gctgctcaccctattcgcctgtattgcagatacatcgatcgcatccacatttttttcaga
ttttcagcagatgatgctcgagatcttattcagaggtaccttacagagcatccagatccc
aataatgagaacattgtagggtacaacaataaaaagtgttggccaagagatgccagaatg
agacttatgaagcatgatgttaatcttggccgcgctgtgttctgggacattaaaaaccgt
cttcctcgttctgtcactactgtacaatgggagaacagctttgtgtctgtgtacagtaaa
gacaaccccaacttgctcttcaacatgtgcggctttgagtgccgaattcttcccaagtgc
cgtacaagctatgaggaattcactcataaagacggagtctggaacctgcagaatgaggtg
accaaagaacgtacagctcagtgtttcctgcgagtggatgatgagtccatgcagagattc
cacaacagagttcgtcaaattctgatggcttcaggatccactacatttactaagattgtg
aacaagtggaatactgccttgataggcctgatgacttatttccgtgaggctgtggtaaac
acacaggagttgcttgatctgttggtgaaatgtgaaaacaaaatccaaaccagaattaag
attggtctgaactctaagatgcccagtcgtttccctcctgtggtcttctacactcccaaa
gagcttggtggtttaggaatgttgtctatgggacacgtgcttatcccacagtctgacctc
aggtggtcaaagcagacagatgttggcatcacccatttccgctcaggtatgagtcatgag
gaggatcagctgatccctaacttgtatcgctacattcagccctgggagagtgagttcatt
gactctcagcgagtctgggctgaatacgctctgaaaaggcaagaggccatcgctcagaac
agacgtcttacattggaagacttggaggattcatgggatagaggcattccacgaattaac
accctgttccagaaggacaggcacaccctggcctatgacaagggatggagagtccgtaca
gacttcaaacagtatcaggtactgaaacagaatccattctggtggacacatcagcgtcat
gatggaaagctttggaatttgaataactaccgtacagatatgatccaggcacttggaggc
gtggaggggattctggagcacacattgttcaaaggcacatacttccccacatgggaaggt
ctcttctgggaaaaagccagcggctttgaggaatcgatgaaatggaagaaactaaccaat
gctcagaggtctggtttgaatcagatccccaacagaaggttcactctctggtggtcccct
acaatcaacagagccaatgtgtatgttggtttccaggtgcagctggacttgactggcatt
ttcatgcacggcaaaattcccacattgaagatctctttgattcagattttcagggctcac
ttgtggcaaaagatccatgagagcattgtaatggatctgtgccaggtgtttgaccaagag
ctggatgcactggagattgagactgtccagaaggagaccatccaccccagaaagtcttat
aagatgaattcatcttgtgctgatatcttgctattcgcttcctataagtggaatgtgtct
cgtccttctctactggcggactccaaggatgtgatggacagcaccacaacacagaagtac
tggattgatatccagttgagatggggagactatgactctcatgacattgaacgatatgcc
cgtgcaaagtttctggactacaccactgataacatgagtatctacccatcacctactggt
gtgctgattgccatagacctggcctataacctccacagtgcttatgggaattggtttcct
ggtgggaaacctcttattcagcaagcaatggccaagataatgaaggctaatcctgctctt
tatgtgctgcgtgagcgcatccgtaagggattacagctgtactcctcagagcccactgag
ccttatctgtcttctcagaactatggcgagctcttctccaatcagatcatttggtttgtg
gatgacaccaatgtgtacagagtaaccatccacaagacatttgaaggtaacttaacaact
aagcccataaatggggctattttcatctttaaccccaggactggacagcttttcttgaag
attattcacacctctgtttgggcaggacagaagcgattgggtcagctggccaagtggaag
actgcagaagaagttgctgctttgattcgttctttgccagttgaggaacagccgaaacag
atcattgtcaccaggaagggcatgttggatcctcttgaggtgcacttgcttgactttcca
aacatcgtgatcaaaggctctgagttgcagctgcctttccaggcctgtcttaaggtggaa
aagtttggagatctgattcttaaagctacagagccccagatggttcttttcaatctctat
gatgactggctgaagaccatttcttcatacacagcattctctcgactgatcctaattctg
agagcattgcatgtcaacaatgaccgtgcaaaagtcatcctaaagccagacaagacaaca
atcactgaacctcatcatatctggcccacactgactgatgaggaatggatcaaggtagaa
gttcaactaaaggatctgatcttagctgactacggaaagaaaaacaatgttaatgttgca
tccctaactcagtctgaaatcagggatatcattttgggtatggaaatctctgcaccatcc
cagcagaggcaacagattgctgagattgagaagcagacaaaggaacagtctcagctcact
gctacccagacacgcacagttaacaaacatggagatgagatcatcacttcaaccactagt
aactacgagacgcagactttctcttcaaagaccgaatggcgtgtcagagctatatctgct
gcaaaccttcacctgcgaaccaaccacatctatgtgtcctctgatgatatcaaagaaact
ggttacacatacatcctgcctaagaatgtgctgaagaagtttatttgcatttcagatcta
cgagctcagattgcaggctacttgtacggagtgagtccaccagataacccacaagtgaag
gagatccgttgtattgtgatggttccacagtggggaactcaccaaacagttcacttgcct
aatcagctgccccagcatgagtatttgaaggaaatggaacctctgggatgggttcacaca
cagccaaatgagtccccacagctgtctccacaagatgtcaccactcatgctaaaatcatg
gcagacaacccagcctgggatggagaaaagactataattattacctgcagcttcacccct
ggttcctgtacattaactgcttataaactgacccccagtggatatgaatggggaagacag
aacacagataaagggaacaacccaaaaggctacctaccatctcattatgaaagagtccag
atgctgttatctgatcgatttctggggttcttcatggtgcctggacaagcatcttggaac
tacaactttatgggtgtcaggcatgatccaaacatgaaatatgagttacaactggctaac
cccaaggaattttaccatgaagttcaccgcccctcacacttcttgaattttgccttgttg
caggagggtgaggtgtactctgctgaccgtgaagacatgtattcatag
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integrated database retrieval system
