Aquarana catesbeiana (American bullfrog): 141129539
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Entry
141129539 CDS
T11018
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141129539 (U2AF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acat03041
]
141129539 (U2AF1)
Spliceosome [BR:
acat03041
]
Complex A
U2 snRNP components
U2 related factors
141129539 (U2AF1)
Complex B
141129539 (U2AF1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
DUF7222
DUF3452
Motif
Other DBs
NCBI-GeneID:
141129539
NCBI-ProteinID:
XP_073473727
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All DBs
Position
LG02:813468178..813506313
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AA seq
244 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGMRSGAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRR
EEDAEKAVKDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISR
ELRRELYGRRRKNTFPQKDFDVVRSRERRSRSRDRGQRGREGGRDGGRERDRRRSRDRER
SGRF
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatatttagcttcaatcttcggcacagagaaggataaggtgaactgttccttt
tatttcaaaatcggggcttgtcgtcatggagaccgctgctcaagacttcataacaaaccc
accttcagccagacgatcgctctgcttaatatttaccgcaacccacagaactcctcccag
tcagcagatgggatgcgttcaggtgcagtgagcgatgtggaaatgcaggaacattatgac
gagttttttgaggaagtcttcactgagatggaggagaagtacggggaggtggaggagatg
aatgtgtgcgataatttaggagatcatcttgtgggaaatgtctacgtcaagttccgtcgg
gaagaagacgcagagaaggcagtgaaggatttaaacaatcgctggttcaacggtcagccc
atccacgcagaactgtctccagtcaccgacttccgggaggcgtgctgccgccaatatgag
atgggggaatgcacacgtggcggcttctgtaacttcatgcatcttaaaccgatctcgcgg
gagctgcgccgggagctgtacggccgtcgcaggaagaacacattccctcagaaggacttt
gacgtcgtcaggtcacgagagcgacgatcccgttccagagaccgcggccaaaggggccgg
gaaggaggtcgggatggaggccgggaaagagatcgacggaggtcaagagaccgcgagagg
tcgggccgtttctga
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integrated database retrieval system
