KEGG   Aquarana catesbeiana (American bullfrog): 141129539
Entry
141129539         CDS       T11018                                 
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
acat  Aquarana catesbeiana (American bullfrog)
Pathway
acat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141129539 (U2AF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:acat03041]
    141129539 (U2AF1)
Spliceosome [BR:acat03041]
 Complex A
  U2 snRNP components
   U2 related factors
    141129539 (U2AF1)
 Complex B
    141129539 (U2AF1)
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_2 DUF7222 DUF3452
Other DBs
NCBI-GeneID: 141129539
NCBI-ProteinID: XP_073473727
LinkDB
Position
LG02:813468178..813506313
AA seq 244 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGMRSGAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRR
EEDAEKAVKDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISR
ELRRELYGRRRKNTFPQKDFDVVRSRERRSRSRDRGQRGREGGRDGGRERDRRRSRDRER
SGRF
NT seq 735 nt   +upstreamnt  +downstreamnt
atggcggaatatttagcttcaatcttcggcacagagaaggataaggtgaactgttccttt
tatttcaaaatcggggcttgtcgtcatggagaccgctgctcaagacttcataacaaaccc
accttcagccagacgatcgctctgcttaatatttaccgcaacccacagaactcctcccag
tcagcagatgggatgcgttcaggtgcagtgagcgatgtggaaatgcaggaacattatgac
gagttttttgaggaagtcttcactgagatggaggagaagtacggggaggtggaggagatg
aatgtgtgcgataatttaggagatcatcttgtgggaaatgtctacgtcaagttccgtcgg
gaagaagacgcagagaaggcagtgaaggatttaaacaatcgctggttcaacggtcagccc
atccacgcagaactgtctccagtcaccgacttccgggaggcgtgctgccgccaatatgag
atgggggaatgcacacgtggcggcttctgtaacttcatgcatcttaaaccgatctcgcgg
gagctgcgccgggagctgtacggccgtcgcaggaagaacacattccctcagaaggacttt
gacgtcgtcaggtcacgagagcgacgatcccgttccagagaccgcggccaaaggggccgg
gaaggaggtcgggatggaggccgggaaagagatcgacggaggtcaagagaccgcgagagg
tcgggccgtttctga

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