Aquarana catesbeiana (American bullfrog): 141131160
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Entry
141131160 CDS
T11018
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04137
Mitophagy - animal
acat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
141131160 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
141131160 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acat03019
]
141131160 (VCP)
03009 Ribosome biogenesis [BR:
acat03009
]
141131160 (VCP)
04131 Membrane trafficking [BR:
acat04131
]
141131160 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acat04147
]
141131160 (VCP)
Messenger RNA biogenesis [BR:
acat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
141131160 (VCP)
Ribosome biogenesis [BR:
acat03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
141131160 (VCP)
Membrane trafficking [BR:
acat04131
]
SNARE
SNARE associated proteins
Others
141131160 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
141131160 (VCP)
Exosome [BR:
acat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141131160 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Viral_helicase1
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
141131160
NCBI-ProteinID:
XP_073474309
LinkDB
All DBs
Position
LG01:complement(47234516..47300923)
Genome browser
AA seq
805 aa
AA seq
DB search
MATGSDPKADDLSTAILKQKSRPNRLIVDEAINEDNSVVSLSQGKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPLD
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLAEDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRISILKAN
LRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGSQGG
TGPSQGAGGSAGGNHFAEEEDDLYG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggctaccggatcagaccccaaagcggatgatttatccacagctattctgaagcagaag
agccgacccaatcggttaattgtagatgaagcgatcaatgaagacaacagcgtagtctct
ctgtcccagggtaagatggatgagctgcagcttttccgtggcgacacggtccttctgaaa
ggaaagaaaaggcgagaagccgtgtgcatcgtcctgtctgacgatacttgctctgatgag
aagatccggatgaacagggtggtccgtaataatctgcgtgtcaggcttggggatgtcatc
agcattcagccatgcccagatgtgaagtatggtaaacggatccatgtcttgcctctcgat
gacacagtggaaggaatcacgggaaatctctttgaggtctatttgaagccttacttcctt
gaggcctacaggcccatcagaaaaggtgacatctttctggtccgaggtggaatgcgtgcc
gtggagttcaaggtggtggagacagatcccagtccgtactgtatagtcgctcctgatact
gtgatccactgtgaaggagagcccattaaacgtgaggatgaggaagagtctctgaatgaa
gtgggttatgacgacattggaggctgcagaaaacagttggcacaaatcaaggagatggtg
gagctcccgctgaggcaccctgcactctttaaggccattggtgtaaagcctccacgtggt
atcctgctttacggacccccaggaactggaaaaaccctgattgctcgagctgtagctaat
gaaactggcgccttcttcttccttatcaatggtcctgagattatgagtaaattggctggt
gagtctgaaagcaacctgcgcaaagccttcgaggaagcagagaagaatgcccctgccatt
atctttattgatgaactggatgccattgctcccaaaagagagaagacccatggagaggtg
gagcgtcgtattgtgtctcagctgctaacccttatggatggtctaaaacaaagagcacat
gtcatcgtcatggctgccaccaaccgaccgaacagcattgatccagcacttcgacgtttc
gggcgctttgacagagaggttgatatcggaattcctgatgctactggaaggctggaaatt
cttcaaatacacaccaaaaacatgaagctggctgaagacgtggatctagaacaggtagca
aatgagacacatggccatgtcggggctgatcttgctgcgctgtgctctgaagccgctctc
caggccatccgtaagaagatggacctcatagacttagaagatgaaaccatagacgctgaa
gtgatgaattcattggctgtcactatggatgacttcaggtgggcacttagccagagcaac
ccatcagcactgcgtgagacagtggtggaggtgccacaggttacctgggaggatattggt
ggcttagaagatgttaaaagagagctgcaggaattggtacagtatcctgtggagcatcca
gataaatttttgaagttcggcatgacaccatctaaaggtgttcttttctatgggccacct
gggtgtggtaagactttgttagccaaggccattgccaatgagtgccaggccaacttcatt
tccatcaaaggccctgagctgctcaccatgtggtttggagaatctgaagccaacgtcaga
gagatctttgacaaggctagacaggccgctccatgtgtcctcttctttgatgaactggac
tccatcgccaaggcccgtggtggcaatatcggtgatggtggtggagctgctgacagagtc
atcaaccagattctgactgagatggatggaatgtccaccaaaaagaacgtcttcatcatt
ggagccacaaacagaccggacatcattgaccccgccatcctacgtcctggccgtctggat
cagctcatctacattccactacccgatgagaagtcccgcatttccatcctaaaggccaac
cttaggaagtctcccgttgccaaggatgtggacgtggatttcctggccaagatgaccaat
ggtttttctggtgctgatctgactgagatctgtcagcgggcctgcaaactggcaatccgt
gaatccattgagaatgagatcaggagagagcgggagagacagacaaatccttcagccatg
gaggtggaagaggatgaccctgtacctgaaatccgccgggatcactttgaggaagctatg
cgctttgctcgccgttccgtcagcgataacgacatcagaaaatatgaaatgtttgcacag
actttgcagcagagccgcggctttggaagtttcagattcccctccggaagtcagggagga
accggtccaagccaaggagctggaggcagcgctggaggaaaccactttgctgaagaagaa
gacgatctgtatggctag
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