Aquarana catesbeiana (American bullfrog): 141131425
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Entry
141131425 CDS
T11018
Symbol
SEMA6D
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
acat Aquarana catesbeiana (American bullfrog)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
141131425
NCBI-ProteinID:
XP_073474777
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Position
LG03:complement(69522447..69612206)
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AA seq
1084 aa
AA seq
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MKLYGLLAGKVLVMVSLVYAVSFPEDDEPINFIDYHYSRQYPVFRGRPSGNESQHSLDFQ
LMLKIRDTLYVAGRDQVYAVNLNEVHKTEITPSRKLTWRSGQADRKNCAMKGKHKDECHN
YIKVFVPRNDEMIFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATMADFQASDAVIYRSMGDGFALRTIKYDSKWLKEPHFLHAIEYGSYIYFFFREI
AVEHNNLGKAVHSRVARICKNDLGGSQRVLEKHWTSFVKARLNCSVPGDSFFYFDVLQSI
TDIIEINGIPTVVGVFTTQLNSIPGSAVCAFTMDDIEKAFRARFKEQKTPDSVWTAVPED
KVPKPRPGCCARHGFAEGYRSSTEFPDETLAFIKSHPLMDSAVPSISEEPWFTKTRVRYR
LTAVAVDHLAGPYLNYTVIFVGSEAGIVLKILAKTNQFSLNDSVLLEEIDAYNRAKCYGG
NDEDRKVLSLQMDKDHHAIFVAFSGCIVRLPLSRCERYGSCKKSCISSRDPYCGWLNHET
CGRVKPGMFFGYEQDVEHGNTAQLGDCHEKLSTTTTPDYKIFGDPTSDIDVPTTSVTTMT
SSPVILPKVIGSWKPRMTGARKFVQEDDPNSSDYTDTLTGVPNGVRWEVHSGESNQMVHM
NVLITCVLAAFVLGAFIAGVIVYCHREMFARKNRKIHKDAESAQSCTDSSGSFAKLNGLF
DSPVKEYQQSIDSPKHYTNILTSRKELPPSGETKVIMMDVQGQPPELAALPTPESTPVLQ
QKSLQPIKNQWEKAQNNLNISRKETPLKSPQFFPSSPPPHSPLAHGQIPSAVVLPNATHD
YNTSFSNSNAHKSDKKLHNLEHSLVKQPSKRDRRSVDSRNTLNDFLKHLNESAGNPKAMM
ADIQVAHQNTHQTPHQTLMLDTMGNMSEIPPKVPNREASLYSPSSTLPRNSPTKRVDVPS
TPNGQMSSLESQRSYHKNSSQRHSISAMPKTMNSPNGVLISRQPSVNRGGYMPPSPNPRM
DYMQGTPVIVHQQTSLSRQSSYTGHGTLPRMGIKRTTSIKPDVPPKPSFAPHTTTVRHLN
KYSY
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctatgggcttcttgccggcaaagtgctggtaatggtgtctttggtctatgca
gttagttttcctgaagacgatgaacctatcaactttatagattaccactattcaaggcaa
tatccagtatttagaggacgcccttcaggcaatgaatcacagcacagcttggactttcaa
ctgatgttaaaaattcgagacacactttatgttgctggaagagatcaagtttatgccgta
aatttaaatgaagtgcacaagactgaaattacaccaagcagaaagttgacgtggagatcg
ggtcaagcagaccgaaagaattgtgcaatgaaaggcaaacacaaggatgaatgccataac
tacatcaaggtttttgttccaagaaatgacgagatgatctttgtctgtggtacaaacgcc
ttcaatcctatgtgcagatattacaggttaagtactttagaatatgatggggaagaaatt
agtggcttggcaaggtgcccatttgacgctagacaaaccaatgtggctctttttgctgat
gggaagttatactcggctaccatggcagacttccaagccagtgacgctgtgatctatcgg
agcatgggggatggatttgctctgaggacaattaaatatgactccaagtggctaaaagag
ccgcattttctgcatgcgatagagtacggcagttacatttacttcttctttcgggagatt
gctgtggagcataacaatttgggcaaggctgtacattcccgtgtagcccgcatatgtaaa
aacgacctaggaggatcacagagagttctggagaaacactggacatcatttgtaaaggca
agactcaactgctctgttccaggggattctttcttctactttgatgttctacagtctata
actgacataatagaaatcaatggaattcccactgttgtcggagtgtttactacacagctt
aatagtataccaggttcagcagtttgcgcttttacgatggatgacattgagaaggcattc
agagcaagatttaaagaacaaaagactccagactctgtttggacagctgtacctgaagac
aaagtaccaaaaccaaggcctggttgctgtgcaagacatggttttgctgaaggttatagg
tcttccactgaatttccagatgaaactctggctttcatcaagtcccatcccttgatggac
tctgcagtcccttctatcagtgaagagccttggttcacaaaaacccgtgtcaggtacaga
ttgacagctgttgcagttgaccatctcgctggcccataccttaactacacagttatattt
gtgggctcagaagctgggattgttctaaagatcttggccaagactaatcaattttctctg
aatgacagtgtattactggaagaaattgatgcttacaaccgtgcaaaatgttatggaggc
aatgacgaagaccgaaaggtcttgtccctgcaaatggataaagaccaccacgccatattt
gtagctttttcaggatgcattgttcgcctgcctctaagccgctgtgagcgatatggctca
tgcaaaaagtcttgcatcagttcaagagatccttattgcggttggctaaaccatgaaacc
tgtggcagagtcaagcctggcatgttttttggttatgagcaggatgtggaacatggtaac
acggcacagcttggagactgccatgaaaaattgtctactacaactacaccagattacaaa
atatttggcgatccaacatctgacattgatgttcctaccacttctgtaaccacaatgaca
agtagtccagtcattctccctaaagtgattggttcctggaaacccagaatgactggtgct
cggaaatttgttcaagaagatgacccaaactcatctgattatactgatacattaacaggt
gtcccaaatggtgtaaggtgggaagtacactcgggagaatcaaatcaaatggtgcatatg
aatgttctgatcacttgcgtcctggccgcatttgttctcggagctttcattgctggagtt
attgtctactgccaccgggaaatgtttgcacgaaaaaacagaaaaatacataaggatgct
gagtctgcccaatcctgtactgactccagtggaagctttgccaaacttaatggtttgttt
gacagccctgttaaggaataccaacaaagcattgattcacctaaacattatactaatata
cttactagcagaaaggaacttccacccagtggtgaaaccaaggtcatcatgatggacgtt
caaggacagccacctgaactagctgcacttccaacacctgaatctacaccagtgcttcag
caaaagagcttacagcccatcaaaaaccagtgggaaaaagctcaaaataatttaaatatt
tcacgtaaagaaacccctcttaaaagtccacagttttttccttcaagcccaccccctcac
tctcctcttgctcatggacaaatcccaagtgcagttgttcttccaaatgccacccatgat
tacaatacttctttttctaattccaatgcacacaaatcagacaaaaagcttcataacctt
gagcattctttggttaaacagccaagtaaaagagatcgacgttctgtggattccagaaat
acgctgaacgactttctaaaacatttgaatgaatctgcggggaatcccaaagctatgatg
gcagatatacaagtagctcatcagaatacccaccagactccacatcagacactgatgctt
gacactatgggaaatatgtctgaaattccacctaaagttccaaatagggaggcatccttg
tactccccctcttcaactcttccacgaaatagcccaacaaaacgggtggatgtgccttct
accccaaatggacaaatgtcatctttagaatcacaaagaagttaccataaaaactcttcc
cagaggcattcaatatcagctatgcccaaaactatgaactcaccaaatggtgtcttgatt
tccagacaacctagtgttaatagaggcggatatatgcctccaagtcctaatccaaggatg
gactacatgcaaggaacacctgttatagttcatcaacagacttccttatcacgacaaagc
agctatacaggacatggaactctccctcgtatgggaataaagaggacaacttccataaag
cctgatgtgccaccaaaaccctcatttgccccacatactacaacagttagacatctaaat
aaatatagctactga
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