Aquarana catesbeiana (American bullfrog): 141131887
Help
Entry
141131887 CDS
T11018
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04510
Focal adhesion
acat04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141131887 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141131887 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
141131887
NCBI-ProteinID:
XP_073475778
LinkDB
All DBs
Position
LG03:complement(192464356..192544613)
Genome browser
AA seq
1780 aa
AA seq
DB search
MVLIQVPGLFLVVLFGIVHSQEPEFSHGCAEGSCYPATGDLLNGRAQQLTASSTCGLQKP
SSFCIVSHLQDEKKCFMCDSRALYNAVDNTESHLIENVVTTFDPNRFNLWWQSENGVENV
TIQLDLEAEFHFTHLIMTFKTFRPAAMVIERSSDFGKTWNIYRYFAYDCESSFPGVSVGP
MKKVDDVICDSRYSDIEPSTEGEVIYRVLDPAFRIDDPYSPRIKSLLRITNLRIKFLKLH
TLGDNLLDSRVEIKEKYYYAIYDMVVRGNCFCYGHASECAPVNGYSDNVEGMVHGRCVCR
HHTKGLNCEQCMDFYHDLPWRPAEGRSSNACKKCNCNAHSTQCHFDMAVYMSTGNTSGGV
CDDCQHNTMGRNCEQCKPFFYQHPDKDIRDPNICQPCNCDPAGSQNGGICDRYSDFSVGL
IAGQCRCKSNIEGERCDRCKEGYYDLNAEDPDGCQPCGCNHLGTIPGGNSCDSVEGNCYC
KRFVMGKQCDQCMPGFWGLSNDLDGCRPCDCDRGGALDNICSPESGQCRCRPHMIGRQCN
EVESGFYFISLDHYIYEAEDANFGPGVRIVERMHPQDRTPSWTGPGFAHVPEGGYLEFHI
KNIPVSMEYDLLIRYEPQLPEQWEEAVLTVIRPGKIPTSSRCGNTIPSDDNQSVALPPGS
RYIVLPRPICFEKGLNYTIRLELPRYSVNSNVENPYTLIDSIVLLPHVKSLDIFSSGGSG
DEVSNAWQTFQRYRCTENSQSVVKTPLTDVCKDFLFSISALLHEGALECQCDPQGSLSAV
CDPNGGHCDCRPNVVGQNCDKCAPGTYGFGPSGCKPCECNLKGSSHSFCHPETGQCPCIH
GAYGRQCDACLPGYWGFPNCQQCQCNGHADDCNTLTGECTSCRDHTEGYSCDRCLAGYYG
DPRLGSGDHCRPCPCPDGPGSGRQFASGCYKDPTSEHVVCTCNKGYTGVRCDGCASGYYG
NPEQNGGVCQPCNCNNNIEMSDPLACDKQSGVCLKCLHNTEGENCHQCRLGYYGSAIHQD
CKKCVCNYLGTEQEHCQGDVSCHCNRTSGQCPCLKNVVGQSCDHCAPNTWNLASGNGCEL
CGCDPGRSLGPSCNEFTGQCHCMPGFGGRNCSECQELFWGNPDFECQACDCDSRGIQTPQ
CDRSDGHCICNEGVEGFRCDKCARGYSGIFPNCVPCHKCFALWDVIIKELSNRTNRLLDR
ASALKITGVIGPYQKIIDKVQETLKEIETIISQNPAVEPLKNLDRLFDEAEKLKSEVWEK
VEEVEKRIAQINLNGSVKLDDLQADADSVGKALKELGQQLEYMKISNVRGAMDSINKYFQ
MSLEAEKKVNASAVNPDSILEHSGSKRREVEDLIDEKYLEFKGRQEEQSRFLDELAGEVQ
NLDLSLLSEKACGTTVGASCEVSQCGGLGCLTEDGKRKCGGDGCNGLVDKANGAWKTAMN
FDKEIQSAMAEVEELSKLVAESKLRAEEAKQSAQSVLNKANSTKEKVDKSNEDLRNLIKQ
IRDFLMQDGADLDSIEAVASEVLKMDMPTTPEQLQALTEDIRERVESLSDVENILQQSAG
DIAKAESLLDEAKKSSQSATDVKATADMVKEALEEAGKAQSAAEKAIKQADDDIKGTNDL
LTSIESEAVVSEETLKNATERMNELEKSLGDLMKKSTSNSESLDSIEKSVEDVKADADQV
KKVLDNELSNKYKKVEDLITKKAEDSSEARKKAEQLQKEAKALLTQANKKLNLLKELEKT
YEDNQRVLEEKAIQLVTLEETVRTILQAISQKAAVYSTCL
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atggtgttaatccaggtgccgggacttttcctagtcgtactgtttggcattgtccattct
caagaaccagagttcagccatggatgtgctgaaggcagctgctacccagccactggtgac
ctgctgaatggacgagctcagcaactcactgcatcttctacatgtggtctccagaagcca
agttcgttctgtattgttagccatctccaggatgaaaagaaatgtttcatgtgtgattcg
cgagcactgtataatgctgtggataatacagaaagtcatcttattgaaaacgtagtcaca
acttttgatcctaatcgctttaatttgtggtggcagtcagaaaatggtgtggaaaatgtc
acaatccagctggatcttgaagcagaattccatttcactcatctcatcatgacctttaag
accttccggccagctgcaatggtgattgaaagatcatcagactttggtaaaacatggaac
atctacagatattttgcatatgattgtgagtcgtcatttcctggagtttctgttgggcca
atgaaaaaagttgatgatgtcatctgtgactctcgatactctgacattgaaccttccaca
gagggagaggttatatatcgtgtcttggatccagcttttcgtattgatgatccttatagt
cctaggattaaaagcttgttaagaattacaaacctgagaataaagttcctaaagctccac
actttgggtgataaccttttggattcacgagttgaaataaaagagaaatactactatgcc
atttatgatatggttgttcgtggaaactgtttttgctatggacatgctagtgaatgcgca
cctgtaaatggatattccgacaatgtggaaggaatggtacatggacgctgtgtttgtaga
catcacacaaaaggtctgaattgtgaacagtgtatggacttttatcatgatttgccttgg
agaccagcagaaggtcgtagcagtaatgcttgtaaaaaatgcaactgtaatgcgcactct
acacaatgtcactttgacatggctgtatatatgtcaactggaaatacaagtggtggagtg
tgtgatgattgccagcataacacaatgggacggaactgtgagcagtgcaagccattcttc
tatcagcatccagacaaagacatacgtgacccaaacatctgtcaaccttgtaattgcgac
ccagctggatcccaaaatggtggcatatgtgaccgttattcagatttctctgtgggactt
attgctggccaatgtagatgcaagtcaaatatagagggagagcgctgtgatcgatgcaag
gaaggctactatgacctaaatgcagaagatccagatggatgccagccttgtggatgcaat
catctaggaactattcctggtggcaattcgtgtgactcagtagaaggaaactgttattgc
aagcgttttgtgatgggaaagcagtgcgaccagtgcatgcctggattctggggtttgagc
aatgacctggatggatgtcgaccttgtgactgtgaccgtggtggagcactggataacatc
tgttctcctgagtcaggccaatgtcgctgtaggccacacatgattggtcgtcagtgcaat
gaagtggagtctggattttatttcatctctttagaccattacatctacgaagcagaggat
gcaaattttggccctggtgtgagaattgttgaacgcatgcaccctcaagatcggacccca
tcttggacaggacctggatttgcccacgttccagaaggaggatacttggagtttcatatt
aaaaatattccagtctcaatggagtatgatcttttaatccgttatgaaccacagctccca
gaacaatgggaagaagcagtgctaacagttattcgtccagggaaaattcccacaagcagt
agatgtggtaataccatcccaagtgatgacaaccaaagtgtagcattacctccaggatct
aggtatatagttcttcctcgtccgatatgctttgagaaaggtctgaattacaccatacgc
ctggagttgccacgatattcagttaactctaatgtagaaaatccctacacattaatcgat
tctattgtcctgcttcctcatgtaaaatccctggacatattcagctccggagggtcagga
gatgaagtcagcaatgcctggcagacattccagagatacagatgtacagagaacagccaa
agtgttgtgaaaactcctctcacagatgtctgtaaagacttcctcttcagcatctcagct
ctgctacatgagggggccctagaatgtcagtgtgaccctcaaggctccctaagtgctgta
tgtgacccgaatggagggcattgcgattgtcggccaaatgtggttggacagaattgcgat
aaatgtgcacctggaacttacggctttgggcctagtggatgcaaaccttgtgaatgcaat
cttaaaggatcttctcattccttctgccaccctgagactggccagtgtccatgtatccat
ggtgcctatggaagacaatgtgacgcatgtttacctggctactggggattcccaaactgt
cagcagtgccaatgtaatggacatgctgatgactgcaatacccttactggagagtgcacc
agctgcagagatcacactgaaggttacagctgtgacagatgtttagctggttattatgga
gaccccaggcttggttcgggtgatcattgcagaccatgtccgtgcccagatggacctgga
agtgggcgccagtttgctagtggatgctataaagaccctacatctgagcatgttgtatgc
acatgtaataaaggttatacaggtgttcgctgtgatggttgtgcatctggctattatgga
aacccagaacagaatggtggtgtctgtcagccttgtaactgcaataataacatagaaatg
tctgatccactggcttgtgataaacaatcaggagtatgtctaaagtgcctccataacaca
gagggtgaaaactgccatcagtgcagactgggatactatggcagtgccattcatcaggat
tgtaaaaagtgtgtctgtaattacctgggcactgaacaggagcactgtcagggagatgtc
agttgccactgtaatagaaccagcggccagtgcccttgtctgaaaaatgtggttggacag
agctgtgatcactgtgcaccgaacacctggaatttagccagtggaaatggttgtgagcta
tgtgggtgtgatcctggtcgttctctgggaccatcttgtaatgagttcactggacagtgt
cattgcatgcctggttttggagggaggaactgcagtgaatgccaggaacttttctggggt
aatccagatttcgaatgccaagcttgtgattgtgattcgaggggtatacagactcctcag
tgtgatcgatccgatggccactgcatctgcaacgagggtgtagaaggattccgttgtgat
aaatgtgcccgaggatattctggaattttcccaaactgtgttccttgccacaagtgtttt
gccctttgggatgtgatcatcaaagagctgtccaataggaccaacagactgctggaccgt
gccagtgctctgaaaatcacgggagttattggaccatatcagaaaatcattgacaaagtc
caggaaacacttaaagaaattgagaccattatctcccagaatcctgctgttgagccgctg
aaaaaccttgacagactttttgatgaggctgagaaattgaaatcggaagtctgggaaaaa
gttgaagaagtggaaaagagaatagcccaaattaaccttaatggatcagtcaaactggat
gatctacaggctgatgcagatagtgttggcaaagcactgaaagagcttggacaacaacta
gagtacatgaagatttctaatgttcgaggagctatggacagcatcaataaatacttccag
atgtctctagaggctgaaaagaaggtcaacgcctccgctgtgaacccagatagcattctt
gaacactcagggtctaaacgacgggaagtggaagatctcatagacgaaaaatatcttgaa
tttaaaggaagacaagaggagcaatctcgatttctagatgaacttgctggtgaggtccag
aatttggatctttctttgctgtctgaaaaggcttgtggaacaacagttggagcatcatgt
gaagtttcacagtgcggaggacttggctgcttaacagaagatggcaagagaaaatgtgga
ggagatggctgtaatggcttggtggacaaagcaaacggtgcatggaaaacggctatgaat
tttgataaagaaattcagagtgcaatggcagaagtggaggagctctctaagctggttgct
gaatcaaagctgagagcagaagaagcaaaacaaagtgcccaaagtgttctaaataaagcc
aactcgacaaaagaaaaagttgacaaaagcaatgaagacctaagaaatcttatcaagcaa
atccgtgactttttaatgcaggatggagcagatctggatagtattgaagctgttgctagt
gaggtattgaaaatggatatgcccactactcctgagcagctgcaggctcttactgaggat
atacgggaacgagtggaaagcctttctgatgtggaaaatatccttcaacaaagtgctggg
gacatcgctaaagcagagtctttgctggatgaagctaaaaaatcaagccagagcgcaaca
gatgttaaggctacagctgatatggtaaaagaagctctagaggaagcaggcaaagcccag
agtgctgctgaaaaagctattaagcaagcagatgatgacattaaagggacaaatgatctg
ctgacttctattgagtcagaagcagtagtctcagaagaaacattaaagaatgccactgaa
cgtatgaacgaacttgaaaagagtctgggagatctaatgaagaagtctacttccaactct
gagtctttagattcaattgaaaagtctgttgaagatgtgaaagcagatgcagaccaagtg
aaaaaggtgctagacaatgaacttagtaataaatataagaaagttgaggacttgataacg
aaaaaagctgaagattcttcagaggcccgaaagaaagcagaacaacttcaaaaagaagcg
aaagccttgttaacacaagcaaacaagaaactgaacttactaaaagaattagaaaaaacg
tatgaagacaaccagagggtattagaagagaaggcaatacagctggtgactttagaagaa
acagtccggacaattctacaagccatcagccagaaagctgcagtctacagcacatgcttg
taa
DBGET
integrated database retrieval system
