KEGG   Aquarana catesbeiana (American bullfrog): 141132142
Entry
141132142         CDS       T11018                                 
Symbol
WDR7
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
  KO
K24738  rabconnectin-3b
Organism
acat  Aquarana catesbeiana (American bullfrog)
Pathway
acat04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:acat00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    141132142 (WDR7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:acat04131]
    141132142 (WDR7)
Membrane trafficking [BR:acat04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    141132142 (WDR7)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd CFAP251_N WDR55 ASA1 EIF3I Beta-prop_EML Beta-prop_VPS8 ANAPC4_WD40 DSE1_N Beta-prop_Aladin Beta-prop_ACSF4 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_NOL10_N Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd PAC11 Beta-prop_DCAF12 WDR72_alpha-sol WDR90_beta-prop_4th Beta-prop_pof12 Tricorn_2nd PD40 Beta-prop_WDR75_2nd KduI DUF1746 LRS4 SAA
Other DBs
NCBI-GeneID: 141132142
NCBI-ProteinID: XP_073476316
LinkDB
Position
LG01:71678478..72265447
AA seq 1485 aa
MTGNSLVLPIILWGRKAPTHCISNVLVMDDMSTIITGCHDGQICLWDLSPELEINPRALL
FGHTASITCLSKASASSDRQYIVSASESGEMCLWDVNDGRCVEFTKLACTHTGIQFYQFS
AGTQREGRLLCHGHYPEVLVVDASSLDVLYTLVSKISPDWISSMSIIRSHRTQEDTVVAV
SVTGILKVWIITAEVHRMQDTEPVFEEESKPIYCHNCQSISICAFTQSSLLVVCAKYWRV
FDAGDYSLLCSVPSEDGQMWTGGDFISADKVIIWTEDGQSFIYKLPASCIPASDSFRIDV
GKAVENSIPPLLYSVMPKEGKKVLICPPVTRFFYGRRDPFHKLLIQGDSSGRLSIWSIPD
DLNEQENMEGLKITMTTSLQEAFDKLTPRPAGIIDQLSVMPNTEPLKVTASVYIPSHGRL
VCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSSRYD
QRYLISGGVDFSVIMWDIFSGEMKHIFCVHGGEITQLLVPPDSCSTRVQHCICSVASDHS
VGLLSLRERKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMGI
TAVEILNACDEAVPAAVDALSHSAVNLKQAMTRRSLAALKTVAHHKLQTLATNLLASEAS
DKGNLPKYSHNSLMVQAIKTNVTDSDIHLLFFDVEALIIQLLTEEASRPNTALISPESLQ
KASGSSDKGGSFLGGKRAAVLFQQVKETIKENIKEHLLDDDDEDEEAMRQKRDQSDPEYR
SSKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNATLDEVCLERLGMLKPHCPVSFGLLSRG
GHMSLMLPGFNHSVFKAADEIIGVVRKMSVTEGLGKGNYGVSRAVTTQHLLSLISLANTL
MSMTNATFIGDHMKKAPQRPPRSGSPESTKGKHSPQSPSNVMQGQIKQAVAADSSARTDF
DPSGSDRTLHSCFSVNEGWSQLAAMHCVMLPDLLGLDQFRPPLLEMLARRWQDRCLEVRE
AAQALLLAELRRIGQSGRKDAIDFWAPYLPQYVDTIMSPGVTAESIQTGSASPDSGGSEV
KVQEEEHDLVDDDLAAGCLSNLPPMKKAFPSYEERRKQATAIVLLGVIGAEFGAEIEPAK
LLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPPHSTIRRTAIDLI
GRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITIGLPLSPAADSARSARHALSLIATA
RPPAFITTIAKEVHRHTALAANTQSQQNIHTTALARAKGEILRVIEILIEKMPSDVVDLL
VEVMDIIMYSLEGSLLKKKGLQDCFPSICRFYMVGYCERSHRIAVGGRHGSVALYDIRTG
KCQHIHGHKGPITAVSFAPDGRYLATYSNKDSHISFWQMNTSLLGSIGMLNSAPQLRCIK
TYQVPPVQPASPGSLNALKLARLIWTSNRNVILMAHDGKEHRFMV
NT seq 4458 nt   +upstreamnt  +downstreamnt
atgactggaaacagtctggttcttcccattatcctctgggggcgcaaggctcccacacac
tgtatatccaatgtgttggtaatggatgatatgagcaccattataacaggatgccatgat
gggcagatctgcttgtgggatctctccccagaactggaaatcaatcctcgggctctcctg
tttggacacacagcctctatcacctgcttatcaaaagcatctgcatccagtgaccgtcaa
tatatcgtcagtgcgtctgaaagcggggagatgtgtctttgggatgtgaatgatggaaga
tgtgtggagttcactaagctggcatgtacacacacgggtatacagttctaccagttctcg
gctgggactcagcgagagggaaggttactttgccatgggcactacccagaagtccttgtt
gtggatgccagcagtctggatgtcctgtatacactggtgtcaaagatctctccagactgg
atcagctcaatgagcatcatccgctctcacaggacacaagaagatacagttgtagctgtt
tcagtaacaggaattctcaaggtgtggatcattactgctgaggttcaccgtatgcaggac
acagagccagtgtttgaggaggaatctaaaccgatttattgccacaactgccaaagcatt
tccatctgcgcattcactcaaagttctctcttggttgtgtgtgctaaatattggagggtc
ttcgatgctggagactactcgctgttgtgttctgtcccaagtgaagatggtcagatgtgg
actggaggggattttatttctgcagataaagttatcatctggactgaagacgggcaaagc
tttatttacaaacttccagctagctgtattcctgccagcgattcattccgaattgatgtt
gggaaagcagtggagaattctattcccccattactgtacagcgtcatgccgaaggagggc
aaaaaggtactgatctgccctccggtgaccaggtttttttatggacgtagagatcccttc
cataagcttctaattcagggggattcatctgggagactcagtatctggagcatacctgat
gacctcaacgaacaggaaaacatggaagggttaaaaatcacaatgacaacatctcttcag
gaggcattcgacaagctgactcctcgtcctgctgggataattgaccagctcagtgtgatg
ccaaacacagaaccattgaaagtgactgccagtgtctacatcccatcccacggccgcctg
gtttgtggtcgagaagatggcagcatagtcattgtcccagccacgcagaccgccatagtc
cagctgctacagggggagcacatgctacgaagaggctggcctccacatagaacattgcgt
ggacaccggaacaaggtgacctgcttactgtatccccatcaagtgtcctctcgttatgat
cagcgctatctgatatctgggggcgtggacttttctgtgatcatgtgggacatcttttct
ggcgagatgaaacatatcttctgtgtgcatggtggggaaatcacccaactgctggtccca
ccagacagctgcagtacgcgagtacaacattgcatctgctcagttgccagtgatcactct
gtcggcctcttaagcctccgagaaagaaagtgcatcatgttggcttctcgccatctcttt
cccatccaagtcatcaagtggagaccatcggacgattatctggtggttggctgttcagat
ggttctgtctacgtctggcagatggataccggtgcattggatcgttgtgtcatgggtatc
acagcagtagaaatattaaatgcttgcgacgaggcagttcctgccgcagtggatgcactc
agccattcggcggtcaacctaaaacaggcgatgaccagacgtagtcttgcagcactgaaa
acagtagcacatcacaaactgcaaacccttgctaccaatctcctggcatcagaagcttca
gacaaagggaatttacctaaatattcacataactcccttatggtgcaagcaataaagaca
aatgtaacagattcggacatacacctgctcttctttgatgtggaagctctaattattcag
ctcctgactgaagaagcctccaggccaaacaccgcacttatctccccagagagtttacaa
aaagcatctggcagctctgacaaagggggctcttttctgggtggtaaacgagcagccgtg
cttttccagcaggtcaaggaaaccatcaaagagaacattaaagagcatctcctggatgac
gatgatgaagacgaagaagccatgcgacagaaaagagaccagagcgacccagagtaccgt
tctagcaagtcaaagccattaacgctacttgagtacaacctaaccatggacacggccaag
ctcttcatgtcatgccttcatgcctggggcttgaatgcaacgcttgatgaggtctgccta
gaacgccttgggatgcttaagccgcactgcccggtatcgtttggcctactctcaagaggt
ggccacatgtctctgatgcttcccggctttaaccatagtgtctttaaagcagctgatgaa
atcataggagttgtgaggaaaatgtcagttactgaaggacttggaaaaggcaattatggt
gtgtcacgtgctgtcactacacaacatcttctttcacttatatcgctggccaacacactc
atgagcatgactaatgcaacgttcattggagaccacatgaagaaagcccctcaaaggcct
ccaagatctggctctccagaatccacaaaaggaaagcattcccctcagagccccagcaac
gtaatgcaaggacagataaaacaagctgttgctgctgattcttctgctcgcactgacttc
gatccctctgggtctgatcgcactttacattcctgtttctcagtcaacgaaggttggagc
cagttagctgccatgcattgtgtcatgctgcctgatctcttgggcctggaccagtttaga
ccaccactacttgaaatgctggcacgaaggtggcaggacagatgtctggaggtgagggaa
gctgcccaggctctgttacttgccgaacttcgacgaatcgggcagtctggacgcaaagac
gctattgatttttgggcaccatatttaccgcaatatgttgataccattatgtcacctggt
gtgacagccgagtctattcaaactggcagcgcaagccccgactcgggagggtcagaggtt
aaagttcaagaggaagagcatgaccttgtggatgacgatcttgcagcaggttgcctttcc
aaccttcccccaatgaagaaagcatttccgtcatatgaggagaggaggaagcaagctacc
gctattgtcttgctaggagtgattggagcagagtttggagcagagattgagcctgcaaaa
ctactgaccagaccacgcagttctagtcagattccagaggggtttggactgaccagcgga
ggctccaactactctcttgcccgacacacctgcaaagctttgaccttcttactgctgcag
ccacctagccccaagctcccccctcacagcaccatccgcaggacagctattgatctgatt
ggacgtggcttcacggtgtgggagccgtatatggatgtatcggccgtgctgatggggctt
ttggaactttgtgctgatgcagaaaagcagcttgctaacatcacaatcgggttgcccctg
agcccggcagcggactcggcccgctcggcacgacacgctctgtcactcattgccacggcc
agaccacccgccttcataacaacgattgctaaggaggtccacaggcacacagctctggct
gcaaacacgcaatctcagcaaaatatccataccactgctctggcccgagcgaagggagag
attctgagggttatagaaatcctgattgagaaaatgccatctgatgtcgtggatctcttg
gtggaggtgatggacattattatgtactccttggaaggatctttgttgaagaaaaaagga
ctacaggactgcttcccttccatttgccggttctacatggtcggttactgtgagcggagc
catagaatagcggtaggtgggcgtcatggctcagtggccctgtatgacatacggactgga
aaatgtcagcatatccatggtcacaaaggaccaattacagcagtttcttttgcccctgat
ggacgttatcttgccacttactccaacaaagacagccatatctccttctggcagatgaac
acatccttactgggaagtatcggaatgctgaactcggcgcctcaactgcggtgtattaaa
acataccaggtgccacccgtccagccagcctcccctgggtccctcaacgccttgaagctg
gccagactcatttggacctccaaccgcaacgtcatcttaatggcccatgatgggaaggag
cacagatttatggtgtag

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