Aquarana catesbeiana (American bullfrog): 141132213
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Entry
141132213 CDS
T11018
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
acat Aquarana catesbeiana (American bullfrog)
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acat03009
]
141132213 (UTP20)
Ribosome biogenesis [BR:
acat03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
141132213 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
SCD
Motif
Other DBs
NCBI-GeneID:
141132213
NCBI-ProteinID:
XP_073476476
LinkDB
All DBs
Position
LG03:complement(317576853..317718393)
Genome browser
AA seq
2773 aa
AA seq
DB search
MKTKSSHHKSENTFKFQTFSERLANVNIDIIHRIDRTESYSEDVETYFYEGLQKWRDLNL
TENFVTFYRELSNKCQSFHLLVYNQNAIVQSLKTHLQVKNSLAYQPLLDLVVQLARDLQG
DFYPHFQDFFKAISSLLDTKDTQLIEWAFTSLSYLYKYLWRMMVKDMPTIYSLYSTLLAH
HKEHIRNFAAESFAFLMRKVPDLGGLLNFMFLDLNEHPQKVEGLGQLLFEMCKGVRHMFH
SCAKKVLQLVLQKVGPVTETEEQLPWTLVGETLKNFVESATSYINGEHMEPLFSNIQESL
LELSGKTDAINSTQCSDQIERLLEAYSILVEHGQGSKIPHPEQVSKTLTILLQVPNTSSS
CCHRLLSIISTLLLNENVSLPVSEIKETVNKVFESGFSRRSLMDFSEGLFKMEQFEQHFL
PSFLQYTLLCFTDKNPSARSEALAILTKLILEKAEPPTVGSMAFEKYPLVFVEKSNCSKL
KGDQSRGSAVLDYILSLIHLSPDLDACEVSHCWAALTVLPHLRPMDKERIMPILSDIIGS
IFSFINQIQLTRGVLWIACQAVSTLLSLDDSAEILHVLPMENIKDLLLLFPDDPSALLLA
DLYFTRLVFCGCQQQLSQDIQMEIFSKLQYNISGNLSKVRLLTIRILNHFSAQPNICLEE
SKEGEKLHVFSILLQAELVPATVHEYRDKLIHLRKLRHDLVHSVAKEDFKEVPLRYLLAM
LYINFTPLWDPVIELIASHANEMENKAFWKVFYEQLEKSAVHAEKELKDEQLNEESTNSQ
NHGIDVSNAGDVGILYVEMLKSKTDLNDRTDYTNFRFLLWKAMSLFPDRVEPRSRELSPL
LLRFISNEYYPADFLIAPSQDLRKKGIDNAKSGVEAKSGAEENATLDEDTVMEEEDNAES
DESSNTGLQTKKTRRAASKQLIEHLKVFSKFSNPRALFLEPKLHDLYTQLLCHQDQNVQK
VALDCVLSYKHPHILPYKENLQRLLEDKSFKEEIVNFSISEENAIVKPIHRTDLMPVLMR
ILYGRMRSKTGSKTQGRSAAGTRMSIVLRFLAGSLPDEIRMFLDLLYEPVKHLKDGGCHA
VVQQAVEQVDLSKVLPLGRQHALLNSLEVVLKNLGNLISPYLPEMLQILLCMTATVSQIL
EQKEKIQLKCINPLKNLRRLGMRRMVDFFTDFETYPYSAEEIDALFVAAIWPQIGRLALE
SQHSPSLVLKLIHIWSQNARYFPLLAKQKPGQPEYDVLANTFALLDKKGLSQSTASIVID
VASNLLNTPDYEESESLPPLVVNDCVVADTPNNDEESASIGVKLVLVHVPAILGYLSKSM
LNSEKMRKKKYSAQVSKELNILSKISKFIQDKEQSNVLIGLLISYLHKSNVAEDTEVDIL
ETIQNLLRQSVNPASFLKPLGKLFAVIQNKLSRQTLCTTFQVLSELAPELEYITDVAVKL
NAFDRRHLDDIHFDVRLTAFQKANSFIKEMKTVDMNYILPLMHNCFYTIHLGDMSLCDNA
GLCLTSIMKLLATVKHSEGEYREIIQRTLLESMKSGLRSKVESVQQDYTTLLSNLIRTFP
EHPEFSDLVQLTDYNDPEMDFFENMKHIQIHRRARALRKLAKHITEGNMMLSSKSLQNYI
MPYATSTIFDEKMLKHENMVNASVEMIGSVCKHLPWSAYMYQLKHFIHVLQTGQVDQKLG
VRMLVTVLDAFHFDYATLEKQLQEANNSESTKNAEENMEDEVMDLDPEDEQMDTQDNENS
TQQDPSGKADNNLKQKMPSNCLPRNKEELTSLINHIQETVNSNILPKLQRCLDAKVKSEE
EHKLVKTKAVSEEEVVRVPIAFAMVKLMQTLPQEVMEVNLPSILLKVCVLLRNRFQEIRD
LARNTLIKILETLGPRYLHYVLKEMQTVLVKGYQVHVLTFSVNLFLKGLTANLKSGDLDG
CIETLIQIFNNELFGNIAEEKEVRGIVSKVMEARSSKSFDSYELLAQFIGKDQVVKLILP
LKEILEKTTSLKIARKVHEAFRRIVFGLVANEDMSAESILLLSFGLISENLPLLTEKDKN
KNSEMLPPDPRLKPQSCLIIQPPLPRGGRKAAVSTKTNMHILVDTGLKLLHVSLKKSKVN
SSEEHALEMLDPFVQILIGCLQSMDVKVITGALQSLIWILKFPLPSIEKSTEELIKQLFL
LLKDYAKAGAARGQNFHLVVSCFKCVTILVRNMTGTITEKQLQVLLGYAEEDLYDSSRQA
TAFGLLKAIVSRKLIVPEIDDVMQKVAKLAVTSQSEQVRVQCRQIFLKYLLDYPLGDKLK
QSLEFIIAQLNYEYETGRDSALEMTAFLFQTFPKGILNQFCGLMFVPLALMMVNDDSTKC
KKMAALAAKSLLGKVETKQKDLMFSLANQWLNNEKSSHKRLGVLACGLFVDVEGVEFESR
LETTLVTIEREIDPLQFEDLKEETEEKAADRLLFSLLTLVAKLIKECNITQLTKHREIVH
KICAHVQAHLRYPHSWVWLTASQIFGLLFSLQKPEDLVNKWMGQKAKKARTETSEVYLVE
NLESKMKDLAFAFCHQLQSKFLDQTLGEQVVKNLLFVAKVIYLLHPEEENTENHQEEKDN
ESVQQEASGGEEDNADRQMEEEKSASLMWLVRKLSILAKKEAAHTPKNPLKRTCVFKFLG
AIAVDLGKERVKPFLPSIIAPLFRELNSTYSDNDPTLKNLSQEIIDLLKGLVGLECFSLC
FSGVQKQANQKRAMRKKQKALQAVANPDVAARKKLKKHKNKIEAKKRKIEFLRPGYKAKK
PRSHALKDLAMVE
NT seq
8322 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgaaatcatctcatcacaagtctgagaacacatttaagttccagacattttca
gaaagactagcaaatgtgaacattgatattatacaccgcattgaccgaacagagagctat
tcagaggatgttgagacgtacttctatgaaggattacagaaatggcgggatctgaacctt
actgagaattttgtaacattctaccgagaattgtccaataagtgccagtcattccatctg
ctggtttataatcagaatgccatagtccaaagcctgaagacccacttacaagtaaagaac
agccttgcctaccaacctctgcttgatctggtggtccaactggctcgagatctgcagggt
gacttttatccacactttcaagatttttttaaagctatctcttcattattggacacaaag
gacactcaattgatagaatgggcctttacatccttgtcttatctgtacaagtacctttgg
aggatgatggtgaaggacatgcctaccatatacagtttatacagcactctgcttgcccat
cacaaagaacacatccgaaattttgctgcagagagttttgcattccttatgaggaaggtg
cctgatttaggtggactgttgaacttcatgttcctggaccttaatgaacatccccagaag
gtggaaggtttggggcagctgctatttgagatgtgcaagggggtcagacatatgtttcac
tcctgtgccaaaaaggttttgcaactggttttacagaaagttggaccagtgacagaaact
gaagaacagttgccctggactttagtaggcgagacactgaaaaattttgtggagtctgct
acttcttacattaacggtgaacacatggaaccactttttagtaatattcaggaatctctg
ctggagctttcgggtaaaactgatgctattaacagtacgcaatgctcagatcagatagaa
agattattagaagcttattctatcctggtggagcatggtcaagggtcaaagattcctcat
ccagaacaggtgtctaagacattgacaatattgttacaagttcccaacacttcatcatct
tgttgtcacagacttctcagtattatctctaccttacttctcaatgagaatgtatctttg
ccagtgtctgagattaaagagacagtaaataaggtttttgaaagtggattttcaagaaga
tcgctgatggacttctcagaagggctattcaaaatggagcagtttgagcagcattttctt
ccaagcttcctgcagtataccctgctgtgttttacagacaagaacccctctgctaggagt
gaggccctggcaattttaactaagctcattttggaaaaagctgaacccccaacagttggt
tctatggcatttgaaaaatatccccttgtatttgtggaaaaatcgaactgttcaaagttg
aaaggtgatcagagtaggggatctgcagtgctggactacatactgtctctgattcatctg
tcacctgacctggatgcctgtgaagtgtcacactgttgggctgcacttactgttctgcct
catttgagacctatggataaagaaagaatcatgccaattttatcagacattataggaagc
attttttcttttataaaccaaatacagcttacacggggagtcttgtggatagcttgccag
gcagtgagtactcttctcagtctggatgattctgctgaaattcttcatgtgcttccaatg
gaaaacataaaagaccttctgctcttattccctgatgatccaagtgccttgctcttggca
gatctttatttcactagattagtgttctgtggttgccaacagcagctttcacaggatatc
caaatggagatattttcaaagttgcagtataatatatctggcaacttgtcaaaggtgcga
cttcttactataaggatactaaatcacttttctgcccaaccaaatatatgtctggaggag
tccaaagaaggagaaaagcttcatgtgttttccattctactgcaagctgagcttgtccca
gccactgtccatgaataccgagataaacttattcatcttcgaaaactgaggcatgatctc
gtgcactcagttgcaaaggaagacttcaaggaggtaccgttgaggtatttactagcaatg
ctgtatattaacttcacccctctgtgggatccggttattgagcttattgcgtctcatgca
aatgaaatggaaaataaagctttttggaaggtgttctacgagcaattggaaaagtctgct
gttcatgctgagaaggaacttaaggatgagcagctaaatgaggaatcaacaaacagccag
aaccacggaattgatgtttctaatgctggagacgtcggaatcttatatgttgaaatgctg
aaaagcaaaactgatctaaatgacaggactgattacaccaattttcggttcctgctttgg
aaagcaatgtcactgtttccagaccgggtggagccgaggtccagggaactttcccctctc
ctgctcaggttcataagcaatgaatattacccagcagactttctaatagctccttcccag
gaccttcgcaagaaaggtatagacaatgcaaagagcggagttgaggcaaaaagtggagca
gaagaaaatgccacgctagatgaggatacagttatggaagaggaagacaatgcagagtct
gacgaatccagcaatacagggttgcaaacaaaaaaaacaagaagagctgcctcaaaacag
ctcattgaacacctaaaagtcttttcaaagttttccaatccacgtgctttgttcttggag
cccaagttacatgacctctatactcagttattgtgtcatcaagatcagaatgtacagaaa
gttgcgttggattgtgtactgagctacaaacaccctcatatacttccctataaggaaaat
ttacaacggcttctggaagacaaaagctttaaggaggaaattgtaaatttcagtatttca
gaggagaatgcaattgtaaagccaatccacagaactgatctaatgcctgtgcttatgaga
atattgtatggccgtatgagaagcaaaactggcagtaaaacacaaggcaggtcagctgca
ggaacccgtatgtctatagttcttcgattcctagcaggctcgctgcctgatgagatccga
atgttcctagatcttctgtatgagccagtgaagcatctgaaggatggtggttgccatgct
gtagtgcaacaggctgtggaacaagtagacctttcaaaagtcctgcccttggggcgccag
catgccttgcttaacagtttggaagtggttctgaaaaaccttggtaatctgatcagcccc
tacttacctgagatgctccagattttactctgcatgactgccactgtgtcacagatttta
gaacagaaagaaaagatccagttaaaatgtataaatccattaaagaatctgaggcgcctg
ggaatgagacgtatggtggactttttcactgattttgagacgtatccctattctgctgaa
gaaatcgatgctttatttgttgctgccatctggccacagatcggcagattggctttggaa
agtcaacattctccttcacttgtgctaaagcttatccatatttggagtcaaaatgctaga
tattttcctttacttgctaaacaaaaacccggacagccagaatatgatgtcttggctaat
acatttgcccttcttgacaaaaaaggtttatctcagtcaacagcaagtattgttatagat
gtagcttctaatctgctcaacactccggactatgaagagtcagaaagtcttcccccctta
gtggtaaatgattgtgttgttgctgacacccctaataatgatgaagagtctgcgagcatt
ggtgtgaagctggtgttagtacatgtccctgcaattctcgggtatttgagtaaaagcatg
ctgaattcagagaagatgcgcaagaagaaatatagtgcccaagttagcaaggaactcaat
atcctctcaaagattagcaaatttattcaggacaaagaacaaagcaatgtgcttattggg
ttacttatatcctatttacataaaagtaacgtagctgaggacacagaggttgacatcttg
gaaacaatacaaaatctactcagacagtctgtgaaccctgcaagtttcctgaagccattg
ggcaaattatttgctgtaatccagaacaagctttctcggcagacactttgcacgacattt
caggtcctgtctgaattggctcctgagttggagtatatcactgatgttgctgttaagtta
aatgcatttgatcgaaggcatttggatgatattcactttgatgtgcgactgacagctttc
caaaaagcaaattcttttattaaagagatgaagacagtcgatatgaactatattcttcca
cttatgcacaactgtttctacaccatccatcttggtgatatgtccctatgtgacaatgca
ggcctgtgtctcactagtattatgaaacttctggcaacagttaaacacagtgaaggggaa
tatcgcgagatcatacaacgtaccctgctagaaagcatgaaaagtggactcagaagtaaa
gtggagagtgttcagcaagattatactactttactttccaatttgatacggaccttccca
gagcatcctgagttctcagacttggttcagctcacagattacaatgatcctgagatggac
ttctttgagaacatgaaacacatccagatccacaggagagccagggcattgcggaaatta
gccaaacatatcacagaaggaaatatgatgctctcttccaaatctctccagaattatatt
atgccatatgccaccagcactatatttgatgaaaaaatgctcaagcatgaaaatatggtt
aatgcatcagtggaaatgattggatcagtatgtaaacatctcccttggtctgcctacatg
tatcaattaaaacattttattcacgtgcttcagacagggcaagtcgatcaaaaactgggt
gtcagaatgctggtgactgtacttgatgccttccactttgattatgccaccctggagaag
cagcttcaagaagccaacaatagtgaaagtacaaagaatgctgaggaaaatatggaggat
gaagtgatggatttagatccagaggatgagcagatggatactcaagacaatgagaattcc
acccagcaagacccatccggaaaggctgataataatttaaaacaaaaaatgccatcaaac
tgccttccaagaaacaaggaagagttgacatcactaataaatcacattcaggagacagtg
aacagcaacatcctgcctaagctgcagaggtgcctagatgccaaggtaaagagtgaggaa
gagcacaagctggtgaaaaccaaagctgtgagtgaagaggaagtggtccgtgtccctata
gcatttgccatggtgaagctaatgcagacacttccacaagaggtgatggaagtcaatctg
cccagtatcctgttaaaggtatgtgtcctcctgagaaaccgatttcaagaaatccgcgat
cttgcaagaaacactctaattaagattctggaaacccttgggcctcgttatctgcactat
gtgttaaaggagatgcaaactgttttagttaaaggataccaggtgcatgtgctgacgttt
tctgtgaacctgtttttaaaaggacttactgccaatcttaaaagcggtgaccttgatggc
tgtatagaaactttgatccagattttcaacaatgagctgtttggaaacattgcagaggaa
aaagaagtgagagggatagtctctaaagtgatggaagctcgaagcagcaaaagctttgat
tcctatgaactgcttgctcagtttattggaaaagaccaggttgtaaaattgatcctgcct
ttaaaagagattttagagaagacaacaagtttgaagattgctcgcaaagtacatgaagct
ttccgtagaattgtgtttggtttagtagccaatgaagatatgtctgcagaatccattctt
ttactgagttttggtctgattagtgagaaccttccactcctaacagagaaagacaagaat
aaaaattcagaaatgctccctccagatccacgccttaagcctcagagctgtttgataatt
cagccgcctcttcctcgtggagggcgcaaagcagctgttagcacaaagaccaacatgcat
attcttgtagatactggactcaagctgcttcacgtgagtttgaaaaaatccaaagtaaac
tcttctgaggaacatgccttagaaatgctggatccctttgtgcagatactgattggctgc
ctacagtctatggatgtaaaggtcatcactggagctctgcagtccctcatctggattctt
aagtttccattaccctctatagagaagagcacagaggagctgattaaacagcttttcctg
ttgttaaaggattatgcaaaagcaggtgctgccagaggtcagaattttcatctggtggtt
agctgtttcaagtgtgttactatactggttcgaaacatgacgggaaccattacagagaaa
cagctgcaagtgttgctgggttatgctgaagaagatctctatgattcttcacgacaagcc
actgcatttggtttgttaaaggctattgtatctagaaagcttattgttcctgagattgac
gatgtcatgcagaaggtagcaaagttagcagtgacttcccagagtgagcaagtgagagtt
cagtgccgacagatattcctgaagtatttgcttgactatcctctgggtgacaaactgaag
caaagcttagagtttataattgcacaactaaattatgaatatgaaacaggacgggattct
gccttggaaatgacagcatttcttttccagacattcccaaagggaatacttaaccagttc
tgtggtctcatgtttgtcccactggctttgatgatggtcaatgatgattctacaaagtgt
aagaaaatggctgccctggcagcaaaatctcttcttggcaaagttgagacaaagcagaag
gacttgatgttctcattggctaaccagtggctcaacaatgaaaagtcttctcacaagagg
ttgggtgtcctggcctgtggcttgtttgttgacgttgaaggagttgagtttgagagcaga
ctggaaactacccttgtgactattgaacgggaaattgaccccttacagtttgaagatttg
aaagaagagacagaagaaaaggcagctgacagactgctattcagcttactaaccctggtt
gccaagctcatcaaggagtgcaatattacacagctcacaaagcacagagagattgtacat
aaaatatgtgctcatgttcaggcacatttgaggtacccccacagttgggtctggctgaca
gcatcccagatttttggattgttgttttctcttcaaaaacctgaagaccttgtgaataaa
tggatgggccaaaaggcaaagaaggctcgaacagagacctctgaagtctacctagtggaa
aatctggaaagcaagatgaaagatcttgctttcgctttttgccatcagctgcagtcaaaa
tttcttgaccagaccctgggagaacaggtggtaaagaatttgctgtttgtagccaaagtt
atttacctcctccacccagaggaggagaatacagaaaaccaccaggaggagaaagataat
gaaagtgttcagcaggaagcttctggaggagaagaggataatgctgacaggcagatggaa
gaagaaaagagtgccagtctcatgtggctcgtgagaaaattgtcaatactagccaagaaa
gaagctgctcatactcctaaaaatcctctaaaaagaacatgtgtgtttaaattcctggga
gccattgcagtggatctgggaaaagagagagtgaagccttttctgccatctatcattgct
ccgctcttcagagaactgaacagtacctattcggacaacgatccaacgttgaaaaatctc
tctcaagaaatcattgaccttctaaagggtttggttggcttagagtgtttctcattgtgt
ttttctggtgtacagaaacaagccaatcagaagagagccatgaggaaaaagcaaaaagct
ctgcaggctgtggccaaccctgatgtggcagccaggaagaaactcaagaaacacaaaaac
aaaattgaggcaaagaagaggaagattgagtttttaagaccaggatataaagcaaagaaa
cctcgcagtcatgctctcaaagacttagcaatggtggaataa
DBGET
integrated database retrieval system
