Aquarana catesbeiana (American bullfrog): 141133029
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Entry
141133029 CDS
T11018
Symbol
USP39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141133029 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acat03041
]
141133029 (USP39)
Spliceosome [BR:
acat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
141133029 (USP39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
141133029
NCBI-ProteinID:
XP_073478193
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Position
LG03:602237103..602284658
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AA seq
497 aa
AA seq
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MSAPKRIKLEAEEPREDRRVSGKYSRSEHEDRRSRHCPYLDTINRSLLDFDFEKLCSISL
SHINVYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLMFYCLPDNYKIIDSSLED
ITYVLKPTFTKAQISNLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPP
LRNYFQEEENYKDIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSK
KKFQITKQGDGVDFLSWFLNALTSALGGTKKNKITIVTEVFQGQMRIFTKKLPHPDLPAE
EKEQLLQNEEYQETKLESPFMYLTLDLPTAPLYKDEKEQLIIPQVPLFSILAKFNGVTEK
EYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLAEEC
QALHKNTTYDLIANIVHDGKPNEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAY
IQIWKRRDDGEQNQEGA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgccgaagaggataaagcttgaggcggaggagccgcgggaggataggagagtt
tcaggaaaatatagtcgcagtgagcacgaagacagacgtagccgtcattgcccataccta
gacactattaacaggagtttgctggattttgactttgaaaagttatgttctatttcactg
tctcacatcaatgtatatgcttgtctggtgtgtggcaaatactttcagggtcgggggttg
aaatctcatgcctacattcacagtgtccagttcagccaccacgtttttctgaacctgcac
acattgatgttttattgtttgcctgataattataagatcatagactcatcattggaggat
atcacatatgttttgaaaccaacatttaccaaagcccaaatcagtaatctggataaacag
gccaagttgtccagagcatatgatggaactacctatttgccaggcattgtggggctcaat
aacattaaagctaatgactatgctaatgctgttctgcaggcattatccaatgtgccccca
ttaaggaactacttccaggaagaagaaaattataaagacatcaagcgccccccaggagat
ataatgttcttgctggttcagaggtttggagagctgatgagaaagctgtggaaccccaga
aattttaaagcccatgtttcccctcatgaaatgctgcaagctgtggttctgtgcagcaag
aagaaattccaaatcacaaagcagggtgatggtgtggactttctttcctggttcttaaat
gccttgacctctgctcttgggggtactaaaaagaataagataacaattgtgactgaagtg
tttcagggacagatgaggattttcaccaagaagttgccccatcctgatctgccagcagag
gagaaagagcagcttctgcagaatgaggagtatcaggaaaccaagctggagtctcctttc
atgtacctgactctggatctccccactgctcctctgtacaaagatgagaaagaacagctg
atcattccacaagtgcctctcttcagtatccttgccaagttcaacggcgtcaccgaaaag
gagtacaagacctataaagagaacttcttgaagcgattccaactgaccaagcttccgcca
tatttgatattttgcattaaacgcttcacaaagaacaactttttcgtggagaagaatccg
actattgtgaatttccctatcacgaatgtagatctgcgggagtacttggcagaggaatgc
caggctttgcacaagaacacaacttatgaccttattgcaaatatagtgcatgatgggaaa
cccaatgaaggctcatatcggatccatgttcttcaccatggcactggaaaatggtatgag
ctgcaagatctgcaagtcactgacattttaccccagatgatcaccctctcagaagcctat
attcagatttggaagagacgtgatgacggtgagcagaatcaggagggcgcatga
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