Aquarana catesbeiana (American bullfrog): 141133473
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Entry
141133473 CDS
T11018
Symbol
TAF6
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
141133473 (TAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acat03021
]
141133473 (TAF6)
03036 Chromosome and associated proteins [BR:
acat03036
]
141133473 (TAF6)
Transcription machinery [BR:
acat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
141133473 (TAF6)
Coactivators
SAGA/TFTC/STAGA complex
141133473 (TAF6)
Chromosome and associated proteins [BR:
acat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
141133473 (TAF6)
STAGA complex
141133473 (TAF6)
TFTC complex
141133473 (TAF6)
SAGA complex
141133473 (TAF6)
SLIK complex
141133473 (TAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
Bromo_TP
TFIID-18kDa
Motif
Other DBs
NCBI-GeneID:
141133473
NCBI-ProteinID:
XP_073478963
LinkDB
All DBs
Position
LG03:complement(672278080..672325579)
Genome browser
AA seq
620 aa
AA seq
DB search
MAEGKKIGNALLPSESMKVIAESIGVSQISEETCQMLTQEVSFRIKEVTQDAMKFMHVGK
RQKLTPNDIDAALKLKNVEPIYGFHAKEFLPFRYASGGGRELHFYEEKEVDLCDIISTPL
PRVPLDVSLKAHWLSIEGVQPAIPENPPPVPKEQQKMEATEPLKAAKPGQEEAGRKGQGA
NAVEGKEKKNTIIEGAPLKLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIAT
DPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNTTLYLEKYLHELIPAV
MTCIVSRQLCLRPDVDNHWALRDFAARLIAQICKNFSTTTNNIQSRITKTFTKSLVDERT
PWTTRYGSIAGLAELGPDVIKTLIVPRLLLEGERLRTVLEGQVLSNIDKIGADHVQSLML
KHTAPVLVKLRAPPDVPDAYRTDYGFLGPTLCSHVMKARAQSALQGPQVNRTTLTVTQPR
PTLTLSQPNSGSITPSPRPPGIIKVPGSLTLPVQTLVSTRPATPTQPSPPPTKFIVVSSA
GSSGTQVLTSSSGPSPSTPCPPGVQPIVKLVSGGQSSGVGGSATGGSSGMQKYIVVSLPT
AGESKTPQPSPPPTTETSGL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggggaagaagatcgggaatgctctccttcccagcgagtccatgaaagtcatt
gcagagtctataggggtgtcccagatatcggaggagacctgccagatgctcacacaagaa
gtcagcttccggataaaggaagtcactcaggatgctatgaagttcatgcacgttggtaag
aggcagaaactcaccccaaatgacatcgatgctgctctcaaactgaagaatgtggagcct
atatacggtttccatgcaaaggaatttctgccgttccgttatgccagtgggggagggcgg
gagctgcacttctatgaagagaaagaggttgatctgtgtgatataatcagcaccccgctt
cctcgagtgcctctcgatgtctccttgaaagctcattggttaagtattgaaggagttcag
cccgccatcccagagaacccccctccagtcccgaaggagcagcagaagatggaggccact
gagccattgaaggctgccaagccaggacaagaggaggctgggcggaaaggacagggggca
aatgctgttgagggtaaggagaagaagaacaccattatagaaggtgctcctctgaagcta
aagccacgcagcatacacgagttgtctgtagaacagcagttgtattacaaggagattaca
gaggcgtgtgttggttcttgtgaagccaagagagcggaagcactacagagtattgccact
gaccctggcctgtatcagatgcttcctcggttcagcactttcatatcagaaggggtgcgc
gtgaatgttgtacagaataacctggcattgcttatttatctcatgcgaatggtaaaagct
ctgatggacaacaccactctgtatctagagaaatatctccatgaactcattccagctgtg
atgacgtgtatcgtcagccggcagctttgtctgcgtccggatgtggacaatcactgggca
ttgagagactttgccgctcggctcattgcacaaatctgcaagaacttcagcaccacaacc
aacaacatccaatccaggataaccaagacatttaccaagagtttggttgacgaacgcact
ccctggaccacccgatacggctccattgccggtcttgcagaactgggacccgatgtgatc
aaaactctgattgtccctcgtttgctgctggaaggagagcgactacgcaccgtcctggag
ggtcaggttctttccaacatcgacaaaattggagctgaccatgtccaaagcctcatgctg
aaacacacagctccagtgctggtgaaattgcgcgcccctccagatgtcccagatgcatac
cgtacagattatggcttcctgggtcccactctgtgctctcatgtgatgaaggctagggcc
cagagtgctttgcaggggccccaggtcaaccggaccactctgacagttacacagcctcgc
cctacactcaccctttctcagccgaactccggctccatcacgccatcccctcgcccacct
gggataattaaggtgcctgggtccttgactttgcccgtacagaccttagtgagtacccgg
ccggccacccctactcagccttcaccaccacccaccaagttcattgtggtgtcttcagca
gggagcagcgggacccaggttctcacctcttcaagcggcccttccccatccacaccatgc
ccccccggggttcaacccattgtgaaacttgtatccggtgggcaaagcagcggtgtaggg
ggctcagcgactggtggcagcagcggaatgcagaaatatatagttgtgtctcttccaacc
gctggagaaagcaaaacccctcaaccctcccctccccccacaacagagacctccggcttg
tga
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