Aquarana catesbeiana (American bullfrog): 141136737
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Entry
141136737 CDS
T11018
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3 isoform X1
KO
K12600
superkiller protein 3
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141136737 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acat03019
]
141136737 (SKIC3)
Messenger RNA biogenesis [BR:
acat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
141136737 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_16
TPR_2
TPR_17
TPR_14
TPR_11
TPR_8
TPR_19
TPR_12
TPR_CcmH_CycH
ANAPC3
TPR_9
TPR_7
TPR_15
PPTA
BTAD
HEAT_Nup120
Fis1_TPR_C
COG4_N
Rhabdo_glycop_FD
ARM_TT21
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
141136737
NCBI-ProteinID:
XP_073480628
LinkDB
All DBs
Position
LG01:complement(167949018..168163166)
Genome browser
AA seq
1594 aa
AA seq
DB search
MEVWSYSDRGLVTVRDKIVEQIGADWTWTGITMSSKEVKAILKNARDAIRNKDYKEALKQ
CKAALKLDKNNYNAWVFIGLAAAELEQPDQAQAAYRKAAELEPEQLLAWQGLGNFYEKVS
QKEFKEDLPNVYQKLLELYKTSDKQKWCDICKKLVDLYEQDRKYLQAAQTWQQLINLKQD
EGINKSEFYKLWRKMTQLLAEDIECQDNEIQQQLLNAFENAISFLEEVPGEEHRALYQDF
VLCLSKLPHEEAMLKKICNNMMTAYPTLTYPLEVLGLHLIKSGDVSEEAVQCYNRLVQLD
GDNGPGLIGMGITALHDKKYDLAVEKLCKGVHKVSSCPHAWFFLAQAQQKLHRYEEAVLS
CEKVIKALSHDNLSPRDSELKNIALQLKAEAMLEYCDPEEILKTLEQISNKNSDPALIAL
KGNVYLKKGFLEQASKLSEELIQTLPEMAEGHFLKGLIHYTQKSYKEAEKSFQSAIERNL
EDANYYYYLGLTYWFMSEETKRDKTKSVTQFLKAAKLDSCHSKVFCYLGHYYKEVAGDKG
RARGCYKKAFDLDKKDGESGAAAVDLSMDLGDMDTALAILSAVTEKASAGTAKWAWLRRG
LFYLRAGQHSKAVSDLHAALRADPKDSNCWECLGEAYLSRGGYTTALKSFMKASELNPNS
IYSAYKIASIKQILGTFKEAATEYQQIIKKSGEYVPALKGLGECHLMLAKGALADFLDAK
AVAAIEKGLAYLTRAVQQRPDLVCLWKLLGDACTSLYAVSPAKVKINVLGALVGQNEGHR
VIGKSEALELGARCYGRALKIQSSANIWYDLGINYLYQAQNLMSSDSQASDTSNLLERSV
QCIKKSLMMDSSNHQYWNALGVVCCSKGVNNNVLAQHAFIKSIQCQPNNAVAWTNLGALY
LVNENIQLSHQAFKVAQSLEPSYVRCWIGQALIAEAVGSYETMDLFRHTTELSMHTEGAN
GYAHWVCTTLQDKSNRNTELYRYSILQMNAISAAHLALNKYTDRIQNDAAAFAMLGYLNE
HLKLKIQAKEAYHRAVLILRDKEDKDRYACALRNYGRSLCAIGQYDEAIKAYTSTALTEF
DDLTGLALAYFKKGLLQDSMKVYKTALSVAKSEQEKAHILTAMAIIENNQGNSDSAKTLL
FKCSMLKEPSSESLQALCALGLAKRDVTLATAALNELLKHVKINDSVYERCLITSAIYAL
QGRMPAVQRQACKAIHSHPGNPELWNLLSRLVPQYTPNNGKGGAVAGIVAQTLSQSQAKK
SLLYTAVNELAAGTLACDNEKQNPLKSLQRAAHFFPDNPAVWAGLMAACQAEYTASYLNK
AQAKGPELNVTFLASVKSKTKAMTQLPTNYAQSLETWSLCQAISSLKDQNKLSEAEALCT
KGIKSCPEKPPLFLLLRQVQYKQLIQSHAPFSEPVLEELKKTVMSNANSQSSWHWLADMY
QSQGMMMDAEMCYRKSLQLASQQGNFSGKLSSLLRLALLALRVCMAKIPDSRWPALLQEA
TSEALKMTSCPLAILLQGLLQFCTKGSRKTRQLLEKVVYQTGCSETIAAIARWYLLRHLH
AKNDDQLIEVLLENAKVHEDSRVLDLHRQLSNSS
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgtggtcttactcggatcgaggcttggttactgtacgggacaagatcgtggaa
cagattggagcagattggacctggacaggcatcactatgtccagtaaagaagtgaaagcg
atattgaagaatgccagagatgcaattagaaataaagattataaagaagcacttaagcag
tgcaaggcagcactaaaattggacaagaataactacaatgcctgggttttcattggatta
gctgctgctgagctagagcagccagaccaagcacaagctgcctacaggaaagctgcggaa
cttgaaccagaacagttactggcctggcagggtttggggaatttttatgaaaaagtcagc
caaaaggaatttaaagaggatttgccaaatgtgtaccaaaagcttttggaactttacaaa
acctccgacaaacagaagtggtgtgacatttgtaaaaaactagttgatctgtacgagcaa
gatagaaaatacttacaggctgcacaaacatggcaacagttaataaatctgaaacaagat
gaaggaattaacaagagcgagttttacaagttatggcgaaagatgacccagctgctggca
gaagacatagagtgccaagacaatgagatccagcagcagctcttaaatgcctttgaaaat
gccatttccttcctggaagaggtaccaggagaagagcaccgtgcactttatcaggacttt
gttctctgcttgtctaagctgccacatgaagaagcaatgttaaaaaagatctgtaacaac
atgatgacagcctaccctaccctcacctatcctctggaagtacttggcttacacctcatt
aagtccggagacgttagtgaagaagctgtccagtgttacaacaggcttgtgcagttggat
ggtgacaacggaccgggcctcattggaatgggaatcacagctctgcatgataaaaagtat
gatctggcagtagagaaattgtgtaaaggagtacataaagtgagttcatgcccccatgcg
tggttctttctggcccaggctcagcagaaattgcacagatatgaagaggctgttctgtcc
tgtgaaaaagttatcaaggctctgtctcatgataacttatcacccagagattctgaactt
aaaaatatcgctctgcaactgaaagctgaagcaatgctggagtactgtgatcctgaagag
atcctgaaaactcttgagcagatttctaataagaacagtgacccggctctcattgccctg
aaaggcaatgtgtatttaaagaagggttttttggaacaagcatccaagctgtcagaagag
ctcatacagacactccctgagatggcagagggacattttctgaaaggtcttatccattac
acgcagaagagttacaaagaggctgaaaaaagttttcagagtgccattgagagaaacctg
gaggatgcaaactattattactatcttggactcacttactggtttatgagcgaagaaacc
aagagagacaaaacaaagtctgttacacagtttttaaaggctgcaaaactggactcctgt
cattccaaagtattttgctacttgggacattactacaaagaagtagctggtgacaaaggg
cgagctcgaggatgctataagaaggcatttgacctagataagaaagatggagagtcggga
gcagcggctgtggacctaagtatggatcttggtgatatggacacagcattagctattttg
tcagctgttacagaaaaggcaagcgcaggaacagcaaaatgggcttggcttaggcgaggt
ctcttctatctgagagctggtcagcattctaaagccgtgtctgacttgcacgctgcactt
agagctgatccaaaggattccaactgctgggagtgtttgggagaggcttacttaagcaga
ggaggatacaccactgcactgaaatcctttatgaaagccagtgaacttaacccaaattca
atatatagtgcgtacaagatagcctccatcaagcagatcctggggacttttaaagaggct
gcgacagaatatcagcaaattattaagaagtctggagaatatgtgcctgcactaaaaggt
cttggcgaatgccatttaatgcttgcaaaaggtgcacttgcagatttcctggatgctaag
gcagtggctgccatagaaaaagggcttgcatacctgacaagagcggttcagcagcggcca
gatcttgtatgtttatggaaacttcttggcgatgcctgtacctctctttatgcagtctca
ccagctaaagtcaaaatcaatgtgctgggtgcccttgttgggcagaatgaaggccatcga
gtgattggtaaatcagaagccttagagcttggagcaaggtgttatgggcgagcattgaag
atacaatcatctgcaaatatctggtatgatcttggcataaattatctttaccaagctcaa
aatctaatgagctctgacagccaagcaagtgacacaagtaatttattggaaagatctgtg
cagtgtattaagaaatccctcatgatggacagtagcaatcatcagtattggaatgcactt
ggggttgtttgctgctccaaaggtgtaaacaataatgtacttgcgcaacatgctttcatc
aagtcaatccagtgtcagcctaataatgctgttgcatggactaatctgggggctctgtat
ttagtgaatgaaaatatacagctaagtcatcaagctttcaaagttgcccagtctcttgaa
ccctcgtatgtgagatgctggatcggacaggccctgattgcagaagcagttggcagctat
gaaaccatggatctcttcagacacactactgagctcagtatgcacacagagggtgccaat
ggatatgcccactgggtctgtacaaccctgcaggataaaagcaatagaaacacagagctg
tatcgctatagcatattacagatgaatgccatctctgcagctcacctagccctgaacaaa
tatacagatcggattcagaatgatgctgctgcctttgctatgctgggatatttaaatgaa
cacctgaagctgaagattcaggcaaaagaagcataccacagggctgttttgatacttcgt
gataaagaagacaaagaccgctatgcctgcgcacttcgaaattatggacggtccctctgt
gcgataggtcagtatgatgaagccatcaaggcatacacatccacagctctgaccgagttt
gatgatctcacaggactggctcttgcatacttcaaaaaaggacttctacaggacagcatg
aaagtgtacaagacggctttgtctgttgcaaagtctgagcaagagaaagcacacatcctc
accgccatggcaattattgagaacaaccaaggcaacagcgattctgccaaaaccctccta
tttaaatgctcaatgttgaaggaacccagcagcgaaagtcttcaagctctctgtgctcta
gggttggcaaagcgggatgttaccttggcaacagctgcacttaatgagttactcaagcat
gttaaaattaatgatagcgtgtatgagaggtgccttattacatctgccatatatgctctg
caagggaggatgcctgccgtgcagagacaggcctgcaaagccatccacagccatccaggc
aatcctgagctgtggaatcttctgtcaaggctggttccccaatacactccgaataatggc
aagggtggtgcagtcgcaggcattgtggctcagaccttaagccaaagtcaagcaaagaaa
tctctgctgtacactgcagtgaatgaattagcagccgggactctggcatgtgacaatgag
aagcaaaatcctttgaagtccttgcaaagagccgcacatttctttccagataatccagca
gtttgggccggattaatggctgcctgtcaagcagagtatacggcttcttacctcaataaa
gcacaagccaaaggcccagaacttaatgtgacatttttagcatctgtgaaatccaagaca
aaagcaatgacgcagcttccaactaattatgcacagtccttggagacctggtccttgtgc
caagccatttcttcattgaaggatcaaaataaactttcagaggctgaggctttgtgtact
aagggaataaagagctgtccggagaagccaccattattcctgctgttaagacaagttcaa
tacaagcaactcattcaatcccatgcacccttctccgaacctgttctggaagaactaaag
aaaactgttatgtccaatgccaattcccagtcttcctggcattggttggctgacatgtac
cagtctcaggggatgatgatggatgctgagatgtgctacaggaaaagtcttcagttggca
tcacagcaagggaacttcagtgggaagctctcaagtctgctgcgattagcacttctcgca
ctgagagtttgtatggcaaagattcccgacagtcgctggccggctcttctgcaagaggcc
actagtgaagccttgaagatgacgtcatgcccgttggccattctactccagggacttctc
cagttctgcacaaaggggtcacggaaaactcggcaattattggagaaagtcgtttatcaa
actggatgcagtgaaacgattgctgccatcgcccgctggtatctccttagacatttacat
gccaaaaatgacgatcagttaattgaagtactcttggagaatgccaaagttcatgaagac
agccgagtcctggatctccatcggcagctgtccaatagttcatag
DBGET
integrated database retrieval system
