Aquarana catesbeiana (American bullfrog): 141137992
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Entry
141137992 CDS
T11018
Symbol
YTHDC2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2 isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
acat Aquarana catesbeiana (American bullfrog)
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acat03041
]
141137992 (YTHDC2)
Enzymes [BR:
acat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
141137992 (YTHDC2)
Spliceosome [BR:
acat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
141137992 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
HA2_C
Helicase_C
R3H
OB_NTP_bind
DEAD
HA2_N
Ank_2
AAA_19
Ank
ATPase
nSTAND3
AAA_22
FtsK_SpoIIIE
SRP54
Motif
Other DBs
NCBI-GeneID:
141137992
NCBI-ProteinID:
XP_073480730
LinkDB
All DBs
Position
LG01:191315782..191607256
Genome browser
AA seq
1423 aa
AA seq
DB search
MSRHNSMSPSPGTPLYPGASKHGKAKGLKDIRIDEEVKIAVNIALERFRYSDQEEMEFPS
SLTSTERAFVHRLAQSLGLISKSRGKGANRYLTIRKKDGSDTIGSLMTCCLTPNTKQAMR
GLVQRFSITNKEKSELLPKTERSNVFAIEAEKHEMSRSSGRLSNGIPQVPSKRGDSEFDS
FRQSLPVYEKREEIISTIKENNVLLVVGETGSGKTTQIPQFILDDCYKHGMPCRLFCTQP
RRLAAIAVAERVAAERGEKIGQSIGFQIRLESRVSPKTLLTFCTNGVLLRTLMGGDSTLS
TVTHIIVDEVHERDRFSDFLLIKLRDVIKKHPTLKLILSSAALDVNLFLRYFGGCPILYI
PGRPFEVKEMFLEDILRTTGYTNKDMLKYKKEKQCEEKQKSALSEWHSVTPENAKSETET
QRQRSASNITKDYDFLDDGGDTLFNQLMEKDVNSLEPWLIREMDSCLSDIWLNKDVDAFP
QLFNLILTENVSVDYRHSETGATPLMLAAGQGFLSQVEQLISMGANIHSKASNGWLAVDW
ARHFVQAEVVDLLESYSASRDPNSLDESSLVQADGSNLSEEEQELLKAYHHSFDDERVDL
DLIMHVLYNICQSSESGAILIFLPGYDEIVGLRDRILLDDKRFADNVNRFQVFMLHSNMQ
TSDQKKVLKTPPAGIRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNHVTMLKMV
WISKASALQRKGRAGRCRPGICFRLFSKLRFQNMLEFQTPELLRMPLHELCLHSKLLAPI
NCPIADFLMKAPEPPPALVVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVL
CAVVLKCLDPILTIACTLAYRDPFVLPAQAAQKRAAMLCRKRYTADTFSDHMALLRAFQA
WQKARSDGWERAFCEKNYLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSE
NWAVVKAALVAGMYPNLIHVDRENMMLAGPKEKRVRLHPTSVLSQPQYKKILPENGQAAA
VQVLPTDWLIYDEMTRAHRIANIRCCTVVTPVTVAIFSGPARLPSNALQEPAFHATLDGV
PNDSSDSEMEDRATALLTSFKLDEWLQFKLDSEAAGLLLQLRQKWHILFLKRMRAPSKPG
TQADEATIRTVITVLSTEEQAAGLHQPSGIGQRPKPISSEELSVSCSWKNSNSRKSSDTD
FSDDLPKLDRTNVKSPPPGLTLQAKNKEKVGLHPEHHEDKSEQMLGKLLESISCTSPCTS
PSSPSSVKSSKSPSSRPNLSVRYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWES
SAVYLVFSVQGSGHFQGFARMLSEIGREKSQEWGSTSLGGVFKVEWIRRENLPFQYAHHL
LNPWNDNKKVQISRDGQELEPQIGEQLLLLWDRVPLGDKSIFH
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacataacagcatgtcaccaagccccggcacaccactatacccaggtgcttct
aagcatggcaaagcaaagggactcaaagacattcgaattgatgaagaagtgaaaattgct
gtcaatattgcactggaaaggtttcgttatagtgatcaggaagaaatggagttcccgtct
tccttgaccagcaccgagagagcatttgtccatcgtctagcccagtcacttgggctaata
tcaaagagtagagggaaaggtgctaataggtacttaacaataagaaagaaggatgggagt
gacaccatcggctccctcatgacatgctgtctgactcccaacactaagcaagccatgagg
ggccttgtccagcgtttttccatcacgaacaaggaaaagtcagaactacttccaaagaca
gagcggagcaatgtttttgcaatagaagctgaaaaacacgaaatgagcaggtccagtggc
cgcctgagcaatggcattccccaagtcccatcaaagagaggagattccgagtttgatagc
tttcgacagtccttaccagtttatgaaaagcgtgaagaaattatcagcactataaaagaa
aataatgttctgctagttgtgggagaaactggatctggaaaaaccacccagatcccacag
tttatactggatgactgttacaaacatggaatgccttgccgtttattctgcactcagcca
aggcgtttggctgcaattgctgttgctgaaagagtggctgctgaaaggggcgagaaaatc
gggcaatctattgggtttcagatccgcctggagagccgtgtttctcccaagactctcctg
acattctgcaccaatggagttcttctgcgcactctcatgggtggagacagcacactttct
actgtgactcatattattgtggatgaagttcatgagcgtgatcggttcagcgactttctg
ttaatcaagctgagggatgtaataaagaaacatccaactctgaagctgatcctttccagt
gctgccttagatgtcaacttgtttctcagatattttggaggctgtcccattttatatata
ccaggccggccttttgaggtaaaagaaatgtttctagaagacatattacgaactactggc
tacacaaataaggacatgcttaaatacaagaaagaaaaacagtgcgaggaaaagcaaaag
tcggccctgtctgaatggcactcagtgacaccggagaacgcaaagtcagaaacagaaacc
cagaggcagaggagtgcttccaatattactaaagattatgacttcctggatgatggaggg
gacacactgtttaatcagctgatggagaaggatgtaaacagcctagagccctggctaata
agagaaatggactcctgtctctcggatatttggctgaacaaagatgttgatgcttttcct
caactgtttaacttgatattgacagaaaatgttagtgttgactatagacacagtgaaaca
ggcgcaactcccttgatgttggcagctggacaaggatttttgagtcaggtggaacagctt
attagcatgggagccaatattcacagcaaagcttcaaatggatggttggctgtggactgg
gctaggcactttgttcaggctgaagttgttgatctgctggagtcctacagtgcttcacgg
gacccaaacagtttagatgaatcctctctggtccaggctgacggcagtaacctgagtgaa
gaggagcaagaactcctcaaagcataccaccacagttttgatgatgaaagggtggacctt
gatctgataatgcatgtactttataacatttgtcaaagctctgagtcaggggccatacta
atatttcttccaggatatgatgagattgtaggattaagagatcgcattttgttagatgac
aagagatttgccgataatgttaacaggttccaggtgttcatgctgcactcaaacatgcag
acatctgatcagaagaaggtcttgaagactcctccagctggaatccggaaaattatactt
tccactaatatagcagaaaccagtatcaccgttaatgatgtcgtatttgtcatagattct
gggaaagtgaaagagaaatctttcgatgctctaaaccatgtcaccatgctaaagatggtt
tggatttccaaagctagtgctctgcaaaggaaaggaagggctggccgctgcagacctgga
atctgtttccgcctgttcagcaagctccgttttcaaaatatgttggagtttcagacacca
gaactattgcgaatgcctcttcatgagctttgcttgcattcaaaattactagcccctatt
aattgtcctattgcggattttctaatgaaggcaccagagccaccaccagccttagttgta
cgaaatgccgttcagatgctaaagacaattgatgcaatggacacatgggaagacttgaca
gaacttggatatcacttggctgatttgccagtagaacctcaccttggcaaaatggtgctg
tgtgctgtggtactgaagtgcttagaccccatccttaccattgcctgcactttagcgtat
cgagatccatttgtcttaccagcgcaggctgcgcagaaacgtgctgctatgttgtgccga
aaacgatatacagcagacacattcagtgatcatatggctttactcagggcttttcaggca
tggcagaaagcacgtagtgatgggtgggaacgagccttctgcgagaagaattacctgtct
caggctaccatggagattattattggaatgagaacgcagttgctggggcagctcagggct
tcaggttttgtcagagctcgtggaggaggagacatcagagatgtaaatacaaactcggag
aactgggcagtagtaaaggctgctctagtggctgggatgtacccaaacttaatacacgtg
gacagagagaatatgatgctcgcgggacccaaggaaaaacgtgtacgtctccaccctact
tcagttctcagtcagccacagtataaaaagattctccctgaaaatggtcaggcagcagca
gtacaagtgttacccacggactggctaatatatgatgaaatgactcgagcacatagaatt
gccaacattagatgttgcacagtggttacaccagtcacagtcgcgatcttctcgggacct
gcccggctgccaagcaacgcattgcaagagcctgcattccatgcaaccctagatggtgtc
cccaatgacagcagtgacagtgagatggaagaccgggccacagctttgttgacatctttt
aagctggatgagtggctacaatttaagctggactctgaggctgctggactcttgctacaa
ctgcggcagaagtggcacattttgtttctgaagagaatgcgggcaccctcaaagccaggg
acacaagcggatgaggccaccatacgaactgtgatcactgtgctgagcactgaagagcag
gctgcaggtttacatcagccctctggaattgggcagagaccaaagccaatatcttccgaa
gagctatctgtgtcctgttcctggaagaacagtaatagtcggaagagctcagatactgat
ttttctgatgaccttcctaaactggacagaacaaatgtgaagtctcctcctccagggtta
actctgcaggctaaaaataaagagaaagtgggtttacacccagaacaccatgaagataaa
tcggagcagatgttggggaagttacttgaaagcattagttgcaccagtccctgtacaagc
ccgtcctcaccctcctctgtaaagtcttcaaagtctccttcatcacgtccaaatttatca
gtgcgttactttataatgaagagcagcaacctgaggaatcttgagatctcccagcagaag
ggaatttggtccaccaccccaagtaatgagcgcaagctgaacagagcattctgggagagc
agtgcggtgtatctggtattttctgttcagggatcaggacattttcagggatttgcaaga
atgctttcagagattggccgagaaaagagccaggagtgggggtccacaagtctaggggga
gtctttaaagtggaatggatacgaagggaaaacttgccttttcagtatgctcaccacttg
ctgaacccatggaatgacaataagaaggtgcagataagtcgtgatggacaggagctggag
cctcaaataggggaacagttgttgctgctttgggacagagttcctttgggagacaaaagt
atttttcactaa
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integrated database retrieval system
