Aquarana catesbeiana (American bullfrog): 141139336
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Entry
141139336 CDS
T11018
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
acat Aquarana catesbeiana (American bullfrog)
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acat03400
]
141139336 (GEN1)
DNA repair and recombination proteins [BR:
acat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
141139336 (GEN1)
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
141139336
NCBI-ProteinID:
XP_073481445
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All DBs
Position
LG04:complement(80869749..80938498)
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AA seq
916 aa
AA seq
DB search
MGVHELWPVLEPVKKHVPLQSLSGKTLAVDLSIWVCEAQSVKQMIGVVAKPHLRNLFFRV
SSLNLMGVKLVFVTEGEAPKVKADTMNKRNAMRYGPTNKPASSRPGRSYFKSVLKECLRM
LDCLGVPWVQAAGEAEAMCAYLDAKGYVDGCITNDGDVFLYGAQTVYRNFTMNVKDPHVD
CYEASAIKDKLGLNRESLVAMAILLGCDYVPKGLPGIGREMALKFIRSLNGESVLHRFYQ
WRKQFDDPTVPPKSAKKTAHCSVCCHPGSAKEHQRKGCSLCASDRYCEPHDYDYRCPCEW
HKSEEEKKNNPLEYTFKTKARKREGFPYHEVIQEFLVNKDKLSKVIRWVRPSLPCFQNFA
LEWMEWPKHYACEKILGLLTYHDMQERKAGRQHDAQLQATRILKTRVRNGIPCYEIEWVK
PGSFVFPDDHPPDAPLLTIEDESLFTAAYPDIVELFRKDRMEAELLKQKSKKSKPTSKVL
PNVDDVASLLSEMTLTPALEKSPASQALVLNVEDVPLPAVSLKCPSDSHDLLFSSESSRP
PLTLLPNETGLNVLTTSLSTKGDTETRPNSCFSTVISSRDEPLVSSPNISSLISDLNLSN
IDWEATSFSMSPQTEFRTGCNEAHGSEDKAAAPEPQIPALANSNQELVTPSKSSLKDSAY
QTPAFNLDSPCLLHLEKLPLRERILLKNARQTVDLNPQKLNEQNLPLVPVSKVLDKQKQT
KLISANNCDNLKENVQSHLKLLKKPSPQKSKTQNTLVTKLAGISSSSKVLQRPTTKSFSF
VKKSTLAPVRNLSDSSLINNVPLKAEAKTLPKKTVCHKIALSSEDEDEQGKPIAKSKTAG
TKKMTHLSKMASTTPASVYLSNEDGSSDKEDLFLSPKCKSSTKAQEEQDDGDDSIISVDS
PLPLSERLKLRLLQNC
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtccatgaattatggccggtcctggagccagtgaagaagcatgtccctctccag
agcctcagtgggaagactcttgcagtggacttgagtatttgggtctgtgaagctcagtct
gtaaagcagatgattggtgttgttgccaaacctcatctcaggaatctctttttccgtgtc
tcctccttgaacctaatgggcgtgaagctggtcttcgtgacagaaggagaagccccaaag
gttaaagctgacactatgaacaagaggaacgcaatgagatacggcccaaccaataagcca
gcttcatccagaccaggacgctcctatttcaagtctgtcctgaaggagtgtctccgcatg
ttggactgcctgggtgtcccttgggttcaagcagctggggaagctgaagcaatgtgtgct
tatctcgatgccaagggctacgtggatggatgtattaccaacgatggagatgtattcctc
tacggagcgcagaccgtttatagaaatttcaccatgaatgtgaaggaccctcatgtggat
tgttatgaagcatctgccattaaggataagctggggttgaaccgagagtcactagttgca
atggcgatcctcctgggatgtgactatgttccaaaaggcttgcctggcattggaagagaa
atggcattgaagttcatcaggtctctgaatggagagagtgtgctacacaggttttaccag
tggaggaagcagtttgatgatcccacagttccccctaaatcagccaagaagaccgctcac
tgttctgtctgctgtcatccaggttcagctaaggaacaccagcggaaaggatgcagtctg
tgtgccagcgatcgctactgcgagccgcatgactatgattaccgttgcccatgtgagtgg
cataagtctgaggaagaaaaaaagaacaaccccttggaatatacctttaagacgaaggca
agaaaacgtgaaggctttccttaccacgaggttatccaggaattccttgtaaacaaagac
aaattatcaaaggtgatccgatgggtccggcctagtctaccttgtttccagaattttgca
ttggagtggatggagtggcccaagcattatgcctgcgagaagattcttggccttctgaca
taccatgacatgcaagagaggaaagcgggcaggcagcatgatgcacagcttcaggcgacc
agaattctgaagacacgagtcaggaatgggattccatgctacgaaattgaatgggtaaaa
ccaggcagctttgtttttcctgatgatcatccaccagatgctccattactgaccattgag
gatgaatccctattcactgcagcttaccccgatattgtagagttattccgaaaagacaga
atggaggctgagctgctaaaacagaaaagcaagaaaagcaagccaacttccaaggtcctt
cctaacgtggatgatgtcgcttctcttttgtctgaaatgaccttgactccagcgttggaa
aagtcaccagcctcacaagcactggtcttaaatgttgaggatgtccccttacctgccgtc
agtcttaaatgccctagtgactcacatgacctactcttctcctcagaatcatctaggcca
cctctgacattgttacccaatgagacaggcttgaatgttttgacaacatctttatccacc
aaaggtgacacagagacacgtcctaatagttgtttttccacagtaataagcagtagagac
gaacccctggtgtcatcacccaatatttcatcgctgatttcagacttaaatttgagtaac
attgactgggaagccacctcatttagtatgtcacctcaaacagaatttcgtacgggttgt
aatgaggcgcatggttctgaggacaaggcagctgctcctgagccacaaattccagctttg
gcgaacagcaatcaagaacttgttacaccaagtaagtccagcctcaaggattcagcttat
cagacacctgcatttaatcttgattctccgtgcctcttacaccttgaaaagttaccttta
agagagagaatactgttgaaaaatgccagacagactgtagacttgaacccacaaaaactc
aacgagcagaaccttcctctggtacctgtatccaaagtccttgataaacagaaacagaca
aaacttatttctgcaaataactgtgacaatttaaaggaaaatgtacaaagtcatctcaag
ttgttaaaaaagccaagccctcaaaaaagtaaaactcagaatactctggtcacaaaattg
gccggaattagcagcagctctaaagtgcttcaacgccccacaacaaaatccttctctttt
gtgaagaagtctactcttgccccagtgaggaatctatcagacagtagcctaattaacaat
gttccgctcaaagctgaggcaaagaccttgccaaagaagaccgtctgccataaaattgca
ttgtctagtgaagatgaggatgagcaaggtaaacctatagcaaaaagcaagacagccggc
actaaaaaaatgactcatctgagcaaaatggcttccaccacaccagcatctgtttatttg
tccaatgaagatggaagctctgataaagaagatctctttttgagtccaaagtgcaaatct
tcaacaaaggcacaggaagagcaggatgatggtgatgactctatcatttctgtagacagc
cctctgccactgtctgaaagattgaaactgagattactacagaactgctaa
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