Aquarana catesbeiana (American bullfrog): 141139519
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Entry
141139519 CDS
T11018
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
acat Aquarana catesbeiana (American bullfrog)
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
acat04990
]
141139519 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
acat04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
141139519 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
NIDO
EGF_2
fn3
EGF_3
MAGP
Fn3_Dep-1_3rd
Fn3_Dep-1_4th
Pur_ac_phosph_N
EGF_CA
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
EGF_Teneurin
Interfer-bind
SdrD_B
Ig_ILCR1
Motif
Other DBs
NCBI-GeneID:
141139519
NCBI-ProteinID:
XP_073481837
LinkDB
All DBs
Position
LG04:137257726..137549448
Genome browser
AA seq
1780 aa
AA seq
DB search
MGSLAQILLLWYVFSIAHGLVPLSDFYPFGYEEGDSVTRRQDDGGSGLLPISRAFTFFGD
KHSGLYVNNNGVVSFLREVSQFTPVAFPISGDRRVVAAFWADVDNRRGGDVFYKETEDPR
ILNRASRDVNSYFPELSEFNATWVFIATWYRVTFYGGDASSPVNTFQIVLITDGLRSFTI
FNYETIEWTTGRHASSGGDSSGRGGIAAQAGFNAGDGWRYFNIPGSRTDDIAGIANTTNV
GIPGCWVFRIDNNNVQVGGCSNATSVCWTLRPCQNGGRCIDDCVTGNPSYTCSCLSGFTG
KHCQIDMGRCFSQPCQNGGSCVDVPGSFTCLCPPDFTGPMCDTEVSPCVYKTCWNGGVCQ
DYYGLAVCQCHPRYTGQSCETEIRPCSSHPCLNGGICEDHEDTYSCLCSLGFTGAHCETE
IRPCSSSPCLNEATCVESGITYTCSCPPWFMGAHCENEIRPCSSTPCENGATCEDLDDTY
SCLCTRGFTGMNCETELKPCSSSPCLNGGLCKDVGSSYSCLCLLGFTGQRCETELKPCSS
SPCLNGGMCEDTVDTYRCVCHQRFTGQHCEAEVRPCFSSPCLNGASCKDMDESYSCLCMR
GFTGERCETEIRPCASLPCLNGGTCRNLEDGYSCVCTGGYTGERCQTEIQPCASFPCLNG
GICEDTPDGFTCLCRQGYSGLRCQSEFKPCSSSPCLNGGVCKDVSVTTYICVCPRGLSGP
RCETETRPCSSSPCLNGGMCKDIDDSYICVCPWGYTGPRCETGLRPCLSSPCMNGATCED
MSDGYSCVCTEGYTGIHCETEINPCSSSPCLNGGTCVNQGANYNCSCPQKFTGEHCETEI
LEVPGACSSSPCQNHGICQEAEGAYSCECPAGYTGVNCENHVSDGCACRNGGQCADGNST
CHCLPGYFGLLCEYEVTSLPCSMGSQCPDGGSCMEYGGSYRCVCHTDYIISNHTMPSPCD
SDPCLNSGRCESHEDTYSCVCTQGFYGRTCEKVKPALCSLFPCRNGGTCKEVSEEYYCVC
PYPFTGKHCETGMRGPCSSGPCHNGGTCFHYLGKYKCDCPPHFSGRHCEKAELDCGPPEH
VKYARVVVTSTWPGGRAEYHCNDGYIMSMPNNTRVCSEDGMWSEAPQCEEIDECESQPCQ
NGAVCKDRISHFLCECPEGYIGKHCELEMNECLSEPCKNGGSCQDLARGFLCTCPEGYIG
TQCETELDGCDSSPCQNGGICENLAGSYLCVCPRGYYGYHCQTVSDLCLLNPCGSRGVCV
SGTDGTVSCTCRTGFTGITCERELLPPLSLSLGAVGENSVWVFWTPPEEVPGHLPDGFAV
SYTALDGSSRTDFVERGNTEHELRGLSPGRPYNITIVTVKRNLRHNDISRPLTLTARTRP
PAVDRARVSSVTESSVTVAWSLNPHRHIPVAHVRLSLQHPSDRTQQAEQEPSVGEYTFRD
LDPGEKYTILISTLSNSDTGNPPSESLPSAPLVAWTRPLPPSNLSAVLVTTSTVHLNWDT
PPVDSVDGYTLNVTHNHSTKSRYVPNGKMTSYTVRDLQPGQRYRITVTALRNTPHGPVNS
DPKTLRIQTVQREGPQERRWTPPRILRNRPPPQTPPEVRMLTERGPPPAEGPQAHRFTEL
TDGRKRITARFNHHHNKSINITKEPEAPIRVENTEGSPIPLRQALQLHDPQQRPREGVRR
GCLETPCINGGTCVNGEVCDCPPGFKGQQCQLACRKETFACTRLYSETLSHPVWEGGVCH
HIGMSCRYRRVYKIQYDVCSREICEGAARGRPKTKVPSKP
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgggttcacttgcccagatcttgcttctgtggtatgtgttttccattgcacatggcttg
gtacctttgtccgatttctacccctttggctatgaagagggtgactcagtaacccgaaga
caagacgatggtggatcaggattactacctatctctagagcatttactttctttggggac
aagcacagtggtctttatgtaaacaataatggagttgtctctttcctgagagaagtgtcc
caatttactcctgtggcatttccaatctccggtgaccgccgtgtggtagctgccttttgg
gctgatgtagacaatcgcagaggaggggatgttttttacaaagagacagaggatcccaga
attttgaaccgtgccagcagagatgtcaactcttactttcctgagctgtctgaatttaat
gccacatgggtcttcattgccacttggtacagggttactttctatggtggagatgccagt
tcacctgtgaacacattccagattgtactaattacggacgggcttcgttcttttactatc
ttcaactatgagacaatagaatggacaacagggcgacatgccagcagtggtggtgacagt
tctggaagagggggtattgctgcccaggcaggtttcaatgcaggagatggctggaggtat
tttaatatccctggctctcgtacagatgacattgcaggaattgcaaacacaactaacgta
ggaattcctggatgctgggtattccggattgacaacaacaacgttcaggttggaggatgc
agcaatgcaacctctgtttgttggacccttcgaccctgtcaaaatggaggtcgctgtata
gatgactgtgtcaccggcaacccttcctacacatgctcttgtctaagtggcttcactgga
aagcactgtcaaattgatatggggagatgcttttctcagccctgtcagaacggaggctcg
tgtgttgatgtacctggttcctttacctgtctatgccccccagatttcactggacccatg
tgtgatacagaggtatcaccgtgtgtttacaagacctgttggaatggaggcgtttgccag
gactactatggacttgcggtgtgccagtgtcatcccagatacaccgggcaaagctgtgag
acagagatcagaccatgttcttctcatccttgcttgaatggagggatatgtgaagatcat
gaggatacatacagctgcctgtgttctttaggattcactggagcacattgtgaaactgaa
atcagaccttgttcctcatccccttgtttaaatgaagcaacgtgtgtggagtcaggaatt
acatacacttgttcttgccctccttggttcatgggagcccactgtgagaatgagatcaga
ccctgctcatcaactccatgtgagaacggggcaacatgtgaagatctggatgatacgtac
agctgtctatgtaccagagggtttacagggatgaactgtgaaacagaactaaagccgtgt
tcttcttctccatgtctaaacggtggcctctgtaaggatgtaggctctagttacagctgt
ctgtgcctgctcgggttcactggacagcggtgtgagaccgagttgaaaccatgctcttcg
tcaccatgtctaaatggagggatgtgtgaggatactgttgatacgtatcggtgtgtgtgt
catcaaaggtttacggggcaacattgtgaagcagaagtcaggccttgtttttcttctcct
tgtctgaatggagcatcgtgtaaggatatggatgaaagttacagctgtttatgtatgcgt
ggattcactggggagcgctgtgagacagagatcaggccctgcgcatcacttccttgcctg
aatgggggaacatgcaggaatttggaagatggttacagctgtgtgtgtacaggggggtac
accggtgaacgctgtcaaacagagatccaaccatgtgcatcctttccttgccttaatggg
ggcatctgtgaggatacacctgatggattcacctgtttgtgtagacaaggatactcaggc
cttcgttgccagtcagagtttaaaccatgttcttcatctccatgcctaaatgggggagtg
tgtaaggacgtgagtgttactacttatatctgtgtgtgtcctcgaggattgtctggtcca
cgctgtgaaacagaaactcgaccatgctcctcatctccttgtctgaatggtgggatgtgc
aaggatatagatgacagctacatctgtgtgtgtccatggggatacactggaccgagatgt
gaaactggattaaggccatgcttgtcatctccctgtatgaatggtgccacttgtgaggac
atgagtgatggctacagctgtgtctgcacagaaggatatactggaatacattgtgagaca
gagatcaacccttgttcatcttctccgtgccttaatggaggcacctgtgtaaatcagggt
gcaaattacaattgttcctgtccccagaaatttactggggagcactgtgaaacagagatc
ttggaagtaccaggggcctgttcttcctcgccatgtcagaaccatggcatatgccaagaa
gctgagggtgcatactcgtgtgaatgtcctgctggatacactggtgtaaactgcgagaac
catgtgtccgatggctgtgcctgcaggaatgggggccagtgtgcggacgggaacagcact
tgtcactgcctaccaggatactttgggctgctttgtgaatatgaggtgacatcacttcca
tgcagcatgggctctcagtgtcctgatggtggatcatgcatggagtatggaggcagttac
cgatgtgtatgtcacacagattatatcatcagtaatcacacaatgccttctccctgtgac
tctgacccttgcttgaatagtgggagatgtgaatcacatgaagatacatattcctgtgtg
tgcactcaaggcttttatgggagaacatgtgagaaagtaaagccggctctgtgcagtctg
ttcccttgccggaatggaggaacatgtaaggaagtcagcgaggagtattactgtgtttgt
ccttatccatttactgggaaacactgtgaaacaggcatgagaggcccctgttcatcaggt
ccttgtcacaatggcggcacgtgtttccattatcttggcaaatacaagtgtgattgccca
ccccacttctctggaagacactgcgagaaggcagagttggactgtggacctccagaacat
gtgaaatatgcccgggtggtggtgacatcaacatggccaggtggtagagctgaatatcat
tgtaatgatggctacataatgagcatgccaaacaacactcgtgtttgcagtgaggatgga
atgtggagtgaggcaccacagtgtgaggaaattgatgagtgtgaatcacagccatgccaa
aatggtgcagtgtgcaaggatcgcatttcccatttcctgtgtgaatgcccagaaggatat
attggtaaacattgcgaattagagatgaatgaatgcctctctgaaccatgtaaaaatgga
ggcagctgccaggatttagccaggggattcttgtgtacatgtcctgagggctacattggg
acacaatgtgagactgagctggatggctgtgactcctctccgtgccagaatgggggcatc
tgtgagaatctagcaggctcgtacctgtgtgtgtgtcctaggggatactacggctatcac
tgtcagacagtgagtgatttatgcctcttgaacccatgtggcagccgtggcgtctgtgtg
tctggtacggatggcactgtgagctgcacatgtcggactggctttactgggatcacttgt
gaaagagagttgctgccccccctctctctgtcacttggtgcagtgggggagaacagtgtg
tgggtgttttggactccaccagaggaagtgcctggacatttgcctgatggcttcgctgtg
agttatacagcattggacggctcctcccggactgactttgtggagagggggaacactgaa
catgagctacgaggtctcagccctgggcgtccttacaacatcaccattgtcactgtgaaa
cgaaatctgaggcacaatgacatcagccgcccgctcacacttactgcccgcacaagacca
ccagctgtggacagagctcgtgttagttctgtcacagaatcttctgtcacagtcgcctgg
tcactgaacccccaccgacacattcctgtggcgcatgtgcgactgtctctgcagcaccct
agtgacaggacgcagcaagctgagcaggagccttcagtgggagagtacaccttcagagat
cttgaccctggagagaaatacaccattctaatcagcactttaagcaactctgacactggc
aatccgccttcagagagcctacctagtgctcctttagtagcctggacacgtccactccca
ccaagtaacctctcagcagtgcttgtcacgaccagcactgttcacctaaactgggacact
cctccagttgactcagtggatggttacacgctgaatgtcacacacaatcatagcacaaag
agtcgttatgtaccgaatgggaagatgacatcatacactgtccgagacctgcagcctggt
cagagatacaggatcacggtgacagcactacgtaataccccacacggccctgtgaatagt
gatcccaagaccctacgtatacagacagtgcaaagggaggggcctcaggagcgtcgctgg
actccgcccagaatattaaggaacagacccccaccacagactcctccagaggttcgaatg
ctgacagaaagagggcctcctcctgcagagggtccacaagcacacagatttacagagctg
acagatggtagaaaacgtataacagccagattcaaccaccatcataataaatccattaat
atcacaaaagagcctgaagctccaatcagagtggagaacacagaaggctcccccatcccc
ttgaggcaagcactacagcttcatgatcctcagcagagacccagagagggagtgcgaagg
ggctgcctggaaaccccatgtattaatgggggaacctgtgtgaatggagaggtctgtgat
tgcccacccgggttcaaaggacagcagtgccagctggcctgcagaaaggagacgtttgcc
tgcaccagactgtattcagagacgctgtcacatcctgtgtgggagggaggagtctgtcat
cacattggcatgtcttgcaggtataggcgggtgtacaagatacagtatgacgtgtgctcc
agggagatctgtgaaggagctgccagaggtagaccaaagactaaagtccccagtaagcct
tga
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