Aquarana catesbeiana (American bullfrog): 141139530
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Entry
141139530 CDS
T11018
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04136
Autophagy - other
acat04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141139530 (ATG4B)
04136 Autophagy - other
141139530 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
acat01002
]
141139530 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acat04131
]
141139530 (ATG4B)
03029 Mitochondrial biogenesis [BR:
acat03029
]
141139530 (ATG4B)
Peptidases and inhibitors [BR:
acat01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
141139530 (ATG4B)
Membrane trafficking [BR:
acat04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
141139530 (ATG4B)
Mitochondrial biogenesis [BR:
acat03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
141139530 (ATG4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
141139530
NCBI-ProteinID:
XP_073481859
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All DBs
Position
LG04:complement(138224581..138251149)
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AA seq
380 aa
AA seq
DB search
MDAATLTYDTLRFSDAPDFPETAEPVWILGKNYSALTEKEEILNDVTSRLWFTYRRNFPP
IGGTGPTSDTGWGCMLRCGQMIFAQAVMCRHVGRDWRWNKQKPRGEYLGILTAFLDKKDS
YYSIHQIAQMGVGEGKYIGQWYGPNTVAQVLRKLTAFDQWSSIAVHIAMDNTVVTEEIRR
LCRTGNCGAGPLCNGHAGASESDMPWKPLVLLIPLRLGLSEINEAYIETLKHCFMLPQSL
GVIGGRPNSAYYFIGYVGDELIYLDPHTTQLSVEPSDSGDIIDDSFHCQHPPCRMHMSEI
DPSIAVGFFCNSEEDFDDWCQRIRKLYLTNGALPMFEVVDQLPIHLSNPDVLNLTPDSSD
ADRLDRFFDSEDEEFEILSF
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagcaaccctcacctatgacacgctccgcttttctgatgcacccgattttcca
gaaactgcagagccagtatggatactggggaagaactacagtgctttgacagaaaaggag
gagattctgaatgatgttacatcgagactgtggtttacataccggagaaactttccacca
ataggaggaacaggaccaacctctgacaccggctggggctgtatgttacgctgtggacag
atgatatttgctcaggctgtgatgtgcaggcacgtaggaagagattggagatggaacaaa
cagaaaccgcggggggaatacctcggtatcctgactgcttttctagacaagaaagatagt
tactattccattcatcagattgctcaaatgggagtaggcgaagggaagtacatcggacag
tggtacgggccaaacacagtggcacaggtgttaagaaaactcactgcttttgatcagtgg
agttcaatagctgttcacatcgccatggataacacagttgtcactgaggaaatacggcgg
ttgtgcagaacaggaaattgtggggctggaccactgtgcaatggtcatgctggagcctct
gaatcagacatgccatggaagcctcttgttttactcatacctctcagactgggtctaagt
gagataaatgaagcctatattgagaccctgaagcactgcttcatgctaccccagtcatta
ggtgttattggtggtcgacccaatagtgcttattacttcataggatatgtaggggatgag
ctgatttacttggatcctcatactacacagctctctgtggagcccagtgatagtggggat
ataatagatgatagcttccactgtcagcatcctccatgtcgaatgcatatgtctgagatt
gacccctctattgcagtgggattcttctgcaattctgaggaggattttgatgattggtgt
caacgcatcagaaagttataccttactaatggagccttacctatgtttgaggtggtggat
cagttgcctattcatttgtccaatccggatgtacttaatcttacaccagattcctcagat
gcggatcgccttgacaggttctttgattctgaagatgaagaatttgaaattttatctttt
tga
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