Aquarana catesbeiana (American bullfrog): 141140089
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Entry
141140089 CDS
T11018
Symbol
SYNCRIP
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein Q
KO
K13160
heterogeneous nuclear ribonucleoprotein Q
Organism
acat Aquarana catesbeiana (American bullfrog)
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acat03041
]
141140089 (SYNCRIP)
Spliceosome [BR:
acat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
141140089 (SYNCRIP)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
hnRNP_Q_AcD
RRM_7
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
141140089
NCBI-ProteinID:
XP_073482997
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All DBs
Position
LG04:complement(328977368..329014499)
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AA seq
623 aa
AA seq
DB search
MAAEHVNGNGTEESMDTYAAVVPSEHLQTLLDAGLPQKVAEKLDEIYISGLVAHSDLDER
AIEALKEFNEEGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
ESKIKALLERTGYTLDVTTGQRKYGGPPPNMIHSGQQPTVGTEIFVGKIPRDLFEDELVP
LFEKAGSIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRPGKHIGVCISV
ANNRLFVGSIPKSKTKEQIVEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
QARRRLMSGKVKVWGNVVTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFGQ
FGKLERVKKLKDYAFIHFDDRVGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
QAAKTQMYDDYYYYGGPHMPPPSRGRGRGGRGGYGYPSDYYGYEDYYDYYGYDYHNYRGG
YDDPFYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYTQRGGPGSARGARGARG
GAQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGXQPIAQQPLQGGDH
SGNYGYKSENQNFITILLGKQWK
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgaacatgtaaatggaaatggtacagaagagtccatggatacttatgctgca
gttgtcccatcagagcatttacagacattgctcgatgctggtttaccacagaaagttgct
gaaaaactagatgaaatttacatttcaggtttagttgcgcatagtgatctagatgaaaga
gcaattgaagctttaaaggaattcaatgaagaaggtgcattagctgtacttcagcaattt
aaggacagtgatctctcgcatgtacagaataaaagtgcctttttatgtggagttatgaaa
acttataggcagagagagaaacaagggaccaaagttgctgattctagcaaaggaccagat
gagtccaagattaaggcccttctagaaagaacaggatacactctagatgtgacaactggt
caaagaaaatatggcggcccaccgccaaacatgatccactcaggacagcagcctactgtt
ggcacggagatatttgtaggaaagattccaagagacctttttgaagatgagcttgtaccc
ttatttgaaaaagctggatcaatttgggaccttcgtttaatgatggatcctttaactgga
ttaaataggggctatgcctttgttacgttctgtactaaagaagcagcgcaagaggctgtc
aagttgtataataaccatgagattcgccctggaaaacacattggtgtatgtatctccgtt
gccaataatagactttttgttgggtctattccaaaaagtaaaacaaaggaacaaattgtg
gaagaatttagcaaagtcacagagggtctcaccgatgttatattatatcatcaaccagat
gataagaaaaagaatagaggtttctgttttcttgaatatgaggatcataaaacagcagcc
caggctaggcgtcgactaatgagtggcaaagtgaaagtatggggtaatgttgtaactgtg
gaatgggcagaccctattgaagatcctgatccagaggtgatggcaaaggtaaaagttttg
tttgttcgtaaccttgccaacacagttacagaagaaatcttggaaaaagcttttggacag
tttggtaaactggaaagagtcaagaaactgaaagattatgcttttattcattttgatgac
cgagttggtgcagtaaaggcaatggaagaaatgaatggaaaagacctggaaggtgagaac
attgaaattgtttttgccaagccacctgatcagaagaggaaagaacgaaaagctcaaagg
caagcagctaaaactcaaatgtatgatgattactattattatggtggtcctcatatgcca
cctccttccagaggccgtggcagaggcggtagaggtggttatggatatccttctgactat
tatggctatgaagattattatgattattatggctatgactaccataactatcgtggtgga
tatgatgatcctttctatggttacgaagactttcaagtcggagctagaggcaggggtggt
agaggagcaagaggtgctgctccatccagaggtcgcggggctgctcccccccgtggcaga
gccggttatacacaaagaggaggcccaggatcagcaagaggcgctcgaggtgcgagagga
ggtgcccagcaacaaagaggccgcggggtacgtggtgcgaggggtggccgcggtggaaat
gtaggaggaaagcgcaaagctgatgggtacaaccagccagattccaagcggcgccagacc
aataatcagaactggggcntccaacccattgctcagcaaccgctccaaggtggtgatcat
tctggtaactatggttacaaatctgaaaaccagaattttatcacgattcttttgggcaaa
cagtggaagtag
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